TCONS_00049398 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049398
Unique NameTCONS_00049398
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049398 ID=TCONS_00049398|Name=TCONS_00049398|organism=Clytia hemisphaerica|type=transcript|length=108bp
ATCATCAACATCAGCATAAAGACATAACATACAAAACAAGATAAACTTAT
TGACAACCATCTAATActtattaaaaagtttttatcatTACATCTCACTT
GATTCATC
Run BLAST on NCBI

transcript from alignment at scaffold_156:35079..35186

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049398 ID=TCONS_00049398|Name=TCONS_00049398|organism=Clytia hemisphaerica|type=transcript|length=108bp|location=Sequence derived from alignment at scaffold_156:35079..35186 (Clytia hemisphaerica)
GATGAATCAAGTGAGATGTAatgataaaaactttttaataagTATTAGAT
GGTTGTCAATAAGTTTATCTTGTTTTGTATGTTATGTCTTTATGCTGATG
TTGATGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031357XLOC_031357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049398-exon-scaffold_156-1491911889:35079..35186TCONS_00049398-exon-scaffold_156-1491911889:35079..35186Clytia hemisphaericaexon
TCONS_00049398-exon-scaffold_156-1510915933:35079..35186TCONS_00049398-exon-scaffold_156-1510915933:35079..35186Clytia hemisphaericaexon
TCONS_00049398-exon-scaffold_156-1575043694:35079..35186TCONS_00049398-exon-scaffold_156-1575043694:35079..35186Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_156supercontigscaffold_156:35079..35186 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049398 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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