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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049589 ID=TCONS_00049589|Name=TCONS_00049589|organism=Clytia hemisphaerica|type=transcript|length=553bp
TAGACTTATTCAAATTAGAAAATTGCCTTATCGCCATATTCGCCAAAAGT
GTGCACTATGGTTGAATAAGCTTTTCAGAGCTAGAATACACGTCAACCAG
ACCACACTCTGACACTGGTTAAGGAAGGTTTGACCATTAAAGACAGGTAG
GGGTTTAAGAATACTTTATGGTACAATTTCATTGAGTGTTTCTGTCATAG
ACATTTTCGGTCCAGAAATCGGTCCTTTTAAGggctttaatttttgaaaa
gtttgtcaAGTGCTTCGACACCTTTAATCCTCTCAAGTGATCCATGGTGT
ACGCGTAAACCACTGCGAAAGAAATTAACTTTTCATTCCCTCAGAATTCA
TCTCATTACATCTTATACAGcgtaaaagaaaagtgtcaaggCATTTCGAG
TTCAACGCAAGTAAACTTGTGCAGACTATGGAGTCATTTAAATTCCTGTT
TATTACAGTGATGTGAGTGTTATATGATGAATTTTCGAACGCTTTTGTTA
TCCAAAAATCCCTGTTAATTAGCCATTCAGAAGATGTGTATACATAATTG
ATG Run BLAST on NCBI transcript from alignment at scaffold_161:58078..58896- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049589 ID=TCONS_00049589|Name=TCONS_00049589|organism=Clytia hemisphaerica|type=transcript|length=819bp|location=Sequence derived from alignment at scaffold_161:58078..58896- (Clytia hemisphaerica)
TAGACTTATTCAAATTAGAAAATTGCCTTATCGCCATATTCGCCAAAAGT
GTGCACTATGGTTGAATAAGCTTTTCAGAGCTAGAATACACGTCAACCAG
ACCACACTCTGACACTGGTTAAGGAAGGTTTGACCATTAAAGACAGGTAG
GGGTTTAAGAATACTTTATGGTACAATTTCATTGAGTGTTTCTGTCATAG
ACATTTTCGGTCCAGAAATCGGTCCTTTTAAGGGCTTTAATTTTTGAAAA
GTTTGTCAAGTGCTTCGACACCTTTAATCCTCTCAAGTGATCCATGGTGT
ACGCGTAAACCACTGCGAAAGAAATTAACTTTTCATTCCCTCAGAATTCA
TCTCATTACATCTTATACAGCGTAAAAGAAAAGTGTCAAGGCATTTCGAG
TTCAACGCAAGTAAACTTGTGCAGACTATGGAGTCATTTAAATTCCTGTT
TATTACAGTGATGTGAGTGTTATATGATGGTAAGATAGTTGTTTTTACCA
TGCCTGAATATAGTTGTCTTGTTTGCTAGACTAGTAAACTCAGAATTATT
CGAAACAGTTTGCACGAAATGTCAATACCGGATGTTTTAGTGTAAAATAC
AACAAATACATTTATATTTTTATGAAATCTGGTGGGGTGAAAACATCATC
AGACAAAAAAATCTAAATTTTTAGTATCTGTAACTAATTTTCGCGGGAAA
ATTAGTCTATCAATGATCTATTCTAATCTATTCTATACATTTTAGAATTT
TCGAACGCTTTTGTTATCCAAAAATCCCTGTTAATTAGCCATTCAGAAGA
TGTGTATACATAATTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049589-exon-scaffold_161-1575043694:58418..58896 | TCONS_00049589-exon-scaffold_161-1575043694:58418..58896 | Clytia hemisphaerica | exon |
| TCONS_00049589-exon-scaffold_161-1575043694:58078..58151 | TCONS_00049589-exon-scaffold_161-1575043694:58078..58151 | Clytia hemisphaerica | exon |
| TCONS_00049589-exon-scaffold_161-1510915933:58418..58896 | TCONS_00049589-exon-scaffold_161-1510915933:58418..58896 | Clytia hemisphaerica | exon |
| TCONS_00049589-exon-scaffold_161-1510915933:58078..58151 | TCONS_00049589-exon-scaffold_161-1510915933:58078..58151 | Clytia hemisphaerica | exon |
| TCONS_00049589-exon-scaffold_161-1491911889:58418..58896 | TCONS_00049589-exon-scaffold_161-1491911889:58418..58896 | Clytia hemisphaerica | exon |
| TCONS_00049589-exon-scaffold_161-1491911889:58078..58151 | TCONS_00049589-exon-scaffold_161-1491911889:58078..58151 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_161 | supercontig | scaffold_161:58078..58896 - |
Blast
The following BLAST results are available for this feature:
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