TCONS_00049598 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049598
Unique NameTCONS_00049598
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3663

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049598 ID=TCONS_00049598|Name=TCONS_00049598|organism=Clytia hemisphaerica|type=transcript|length=3663bp
TCAAAGGCCTCCAAGGTTTTCTAACCTAATAACAGAAATGAGGAGTTTTC
TTAACACAACACTCTGAAGTTCTAAAGATCACTGAAAGCTAACATTTGAG
GAAAATGGTCATGCTTTtacgaaaaattttcaattaacTTTTTGACTTGT
GCCAAAAGCATGAAAATCATAACCAGCTGAAATAGCACTTCATGAAAAAT
GtgttttatagataggaattaaAATTCTTTCCCATAATGGTTTGGAACTG
GAACTGACTGGaaagcttttttcaaatttgaggcAAAAGATAAAATGgat
gtttgttattgttgtaAAACTCAAATTGCTTGGtcttaatttttaaaaac
tttgtaaGTATTCTGATGGTTGGTATCCATTTTCTTATAGCTTCAATTTT
CCCAATGTTACTTTAGTATGTCTACTATATTGAAAACCCTATTATTTAGA
AAGATACATTTAGttacaaattcttcaaaatatcaaaaacataCACATGA
CCTTTAAAGATGGCAAGCTACACAGCAGGACAATTTGCCAATTACAACAG
TTTAACAGACAAAAATCTCAGTGGATACTTTGCAAACACACAGATGAGAA
AACATTTAGTCAGATCTGGTCTGATAAcaaagaatggaaaaataacAAGT
GAAAATTCATACAGATTGAAAATTGCTAAACGAGAGCATAGAGAACATGT
CAAAGATCTTTTGGCAACAGCCATTGTTGAAAAAGCATTAGATATGGAGA
GAATGAGACAATATGAAATTCGCAAAAAACTAGACGAACTATACAAAATT
GAACTTGTCAACAAAGTCCGTTCAGAAAGAGGAGGTAAAAGTAAAGAAGA
ACTTTATGCATTACTGTCACCCCGGAGTGGTGGTACAAGGAAGAAAAGTC
GGAGAAGTGTCAAAAGTGCAGCCATCACTTCAAGCGAAAGAGAAATGACA
AAACTACCTGAAATCAATTTTGATGAGCGAACTCGGTTATTAAAATATGA
AACAACATCGGTGGATAGTGGTAGTGACAGTGCTTCTAGATATACTGCAC
CTCGCCCTCCCAAACAACCTTCTGCTGGTAGAAGTGTCAGTGCACACACC
TATGGTAGCAAGGCTCCACACCCACCGCCAccaaagtcaaagaaaaagaa
gaaaaggaaaattcatagggGATTGATGTTAGCAAAGAGTGAACAAATGG
TAGCACATCGTGTACAGGTTCAATCTATGGCTGAAGTTACCATGAAATTC
TTAGGTTCCAATTTACAATTAGCAAGCGATATGTTTCCCGCCAACAAATT
ATCAGAGATTCAAGTTATTCAACAGCATTGTGGAGCAAGCACCGTTTGTG
TTTTTCGTGAAATGATCCCACCAAATAcTGTATTCACTTTTGTATCTCGC
CGTCACCGTGGTTCACCGTTCGGCCTCACCATCAACATAGACGGtatcaa
aaacattcgaatcagtTCGTGTTGCGAATACAAACATAAACCTGGTTATC
GATTGGGTGGTAAAAACAGTCAGTTCGGTTTAAtctcagttcaaggtgct
gcaCCATGTTATAGATGTCAAGTCAGACTGAACCTACTGGATAAGAATAA
CAATGAAGCCGAAAAAgagGCGTCAAGTGACGAAGAAGCGGCTACAAGAA
GTTTCGACATCATCGTTAGTCGTGGTGGGAAGCGTCAGGAAGCCGTCAGA
GAAAGACCTAttTCAGCGAATGTTACAACTCAAACAGAGGCATCTTTATT
ACTCCCAAACTCGCAAGAAGATGACGAGTcaccaaaagaaaaagatgcCG
TGGCACTAACAGAACAATATCAAGACGACTTCGACGATGACTTTGAAGCC
GACGAAAACGACAGTAAAAACGGCGACGATGATTTAAACGAAAACGTATC
ATCTTCTTCCGAATCGGATTCGTCGGATAATGAATCCGATAAAGATTCCG
ATACAGAAAGCTCAGATACGGAAAGTGattcagaaaaatataaatccGAG
AACTCTGGAGAAAAACAGATGGAcaacagcttaactgaaacgGATGATAC
GATCACTTCAACCAATCAGCAACGAGATGAAGAAGACGAGCATCAACCAA
GTGACGTTGACGCTCGTTCCGACGCTGATTCTGATACCGACGTCGCTAAA
AAGTCCGACACTTACGACGATCATGATGATCATGATGACGATAAAGAACA
TGTCAATGTAGAACAAGAAGACTCTAAGAAACGAGACAGCGATTCAGAGT
CGGATAAAGAAAGCGTCAAGTCGGATGGTGACGGACGTCGTTCATCGGTA
TCGTCGGAAAGTGATTCAAGTGATGATAACGAGAAAGATAAAAACTTGAA
GGACAACGAAGAAGAAGTCGAAGAGGGAAAGGATGATGTGAAAGACAACG
AAGAACAACATAACGCTAAATTAGCTGATGATTTGATAGAGAAAATTGAA
CACATGAATATAGAAGATGAACCCGAACATCAACCCAAAGAGGAGAAGCA
AGACCACAATGATGATGAAGAATCTAACCAATTAgaaggaaaagaagaag
aagatgtgGAAAATGAAGATGGTGCTGGTGAATATGAAGAAGAGATGGCG
CCAAGTATCCCGTCAGTTGTCAGTAGAGAAAGCACCATGCTAACAGGTAA
CGAAGACGGACGTTTTGAgagtgaaaacaaaacaattcaattCAACGAAG
AAGTCGATGTAGTGCATTATGAGAAAGTTGAAGTTGAATCATCAGCCAAT
GACGGTCACGGAGATTCGTCAGATGACGGAAGTGACGCCGACGATGACGA
TGATTTTGACAGCGCGTTAAACAATGGACGTGAGCGTGTCATCCTGGCAG
ATCTTGGATTGGATGATGACGATCTTGAAGTGGAAAGTGACGATATCATT
ATTGATAGTGACGGTGATATCAAAGAAGTGCCTAAAAATAAAGAAGGTAC
TCTTATCATTGAGTAAATTGTGGAGTAGGGTGATTAATTTTACTAATCTA
CTGTCAAGTAGTGTTAAGTGAAAGTCTTGCTTTAGTTATGATTAGGTTTG
AGAATTAAGTGAGGCTTAAAGACTCTTTCAGAGACAATGGCTTTGAAGTC
AAGATATTAAAGAAAGAACATTGATTTACAGCTTCAAAGTCACAAGAGTA
GCTCTTTCAATTTGATAATATTTAACAGCCAAAATGTACtggttcttatt
ttaaaaagtgTGCATCGGAGTTATAAGCAGTCAATACAGAGGGTGCAAAG
GTGGTGTATTGTGGATGTGGGCGTGGTTTATTATTCAAATAGGCTTGGTT
TGTTAGGAATGCGGTTTGGTTTGAATTTGACAACCACTTTTTAAAAGACT
TCTAAAGATGAAATATAGTTTAAAAGTAAGGGTATGATCTGAGGGGTTTT
CTCAGCAAGCACTTTCCGAACAGGGACacattttcggatttttaagacCA
CCCCCTTGTTTTGTTTATCAATGTCCCTCTCTCCAAGCTTCTGTGCATTT
TCTCCTCTTTTTTTTCAGTTGATTCAGTATAGAAAGATATGAAGCTTGCA
GAAGACTGTACGTTGCGAAAGGATTCAGTTAAAAGGACTTTTATTATAAA
AGTGTAAACTGAGTAATTGATAACAATTAATTTTAACACACTATTAACCC
ACTTAAaattaca
Run BLAST on NCBI

transcript from alignment at scaffold_161:92333..104108-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049598 ID=TCONS_00049598|Name=TCONS_00049598|organism=Clytia hemisphaerica|type=transcript|length=11776bp|location=Sequence derived from alignment at scaffold_161:92333..104108- (Clytia hemisphaerica)
TCAAAGGCCTCCAAGGTTTTCTAACCTAATAACAGAAATGAGGAGTTTTC
TTAACACAACACTCTGAAGTTCTAAAGATCACTGAAAGCTAACATTTGAG
GAAAATGGTCATGCTTTTACGAAAAATTTTCAATTAACTTTTTGACTTGT
GCCAAAAGCATGAAAATCATAACCAGCTGAAATAGCACTTCATGAAAAAT
GTGTTTTATAGATAGGAATTAAAATTCTTTCCCATAATGGTTTGGAACTG
GAACTGACTGGAAAGCTTTTTTCAAATTTGAGGCAAAAGATAAAATGGAT
GTTTGTTATTGTTGTAAAACTCAAATTGCTTGGTCTTAATTTTTAAAAAC
TTTGTAAGTATTCTGATGGTTGGTATCCATTTTCTTATAGCTTCAATTTT
CCCAATGTTACTTTAGTATGTCTACTATATTGAAAACCCTATTATTTAGA
AAGATACATTTAGTTACAAATTCTTCAAAATATCAAAAACATACACATGA
CCTTTAAAGATGGCAAGCTACACAGCAGGGTAAGTGATATATCAGTTTTT
TTTTGAATTATTGTCAAATCCCTGTCATTTGAAATGTGAAATGACTAATA
TCATCTCAGGCTGAAGTTCACTTCAGTCTTTAATAAAGCAAACACTGTTT
CTGTACACAAGTTCATGTGAAAAGGGAGAGTTAAAGTTACTTCAGGGTGA
CTTCACCCTAAGGCCATTTTTATGTACGGCTTGTAGGGCAGGCACAAGAG
TTTTTCCTTTAGAAAAAATCATTAACCTCAAATCTCAAAAGTGACTTTCT
GGTGAAAAATAATTCTTCACTAAAATATTTTTCTCTAAAGATAACTTTTT
TGATATATGCGCATCCTGAAAAAAATCATAGAATTTTTATGAAATTTCAT
TGAAAATCATCCAGGCTGCATGTAAAAAAACCCCGAAGAATTTTCGAAAT
GAGTTAATTTCACCTGATTTTACCCTTATATAATTTTTCCCAGGCTAAAG
TAAACTCTATCAGATATCTCAATAATCACATCAATCATTATTTTACTTTA
GACAATTTGCCAATTACAACAGTTTAACAGACAAAAATCTCAGTGGATAC
TTTGCAAACACACAGATGAGAAAACATTTAGTCAGATCTGGTCTGGTATG
TATTTCAATACTTTTATTTACTTAATCATCCTTTCATTTTAACTCATTGG
TATTAGTGGAAATGAAATCATACCTGGATATTTTCGAGATTTGATGTTTA
CAATCGAAGAACAGTTTGTTCTATCATTAAAAAAATGACTCCATTGTCTA
CCTTTTTCTACATGGCCAAAGTCCTTCATATCCAGGGTAATATTTCTAAG
TCCTCATCTAAATGGATATAGTTTTCTTTATTGAATATTTATAATTTTGT
TCAATCTTTTATTTTTCACTTCTAGATAACAAAGAATGGAAAAATAACAA
GTGAAAATTCATACAGATTGAAAATTGCTAAACGAGAGCATAGAGAACAT
GTCAAAGATCTTTTGGCAACAGCCATTGTTGAAAAAGCATTAGATATGGA
GGTATAACCAGAAAGTATTATGGCTTAATCAGACTAGCATAATTTTGGGT
CATGCTTCTTAGGTGGCCAAGACACAAGACATATATGATTAATTTCTCTT
TTTCATTTTTTTGCCAAATCCTCAGATTTAGGCTGATTGACATTTGCATT
CTTATAGAGAGAGAGCAGACCGGACCTTTAACAGTATTGTCTTTTTTGAA
AGTTCCTGAAAATCTTTCAAGATTTCCCAAAAAGAAACACCTTGAGAATT
CCTGCTTTTTTAATAATTGATGGTAAAACAAGAACTCAAAATAAAATTTC
GGAAGGTAGTAAGTTTCTAAGTGCACTTGAGGGCAACCAGAATACCTCCT
TTCCCTAGCTTTTCAAGGCTATGGTAGGGCGCCAGTCCTTCCCAAAGATT
TTTACACTTACCCTTGATACTTTGATTGCTGAGCATCAAACAGAGTGGCA
TCAAGTACCATGTTATAAGTCTCTGGCACCATCTGGCTGGAGATTGAACC
CGTAACCATGCACACTATAGTTGAATGTTCTATCTTTATGCCACAGATTG
CCTGAAATGGATGGTTGATTCTTATTTAGTTTTTATTGTTTATTTTACTC
TTTCCAGAGAATGAGACAATATGAAATTCGCAAAAAACTAGACGAACTAT
ACAAAATTGAACTTGTCAACAAAGTCCGTTCAGAAAGAGGAGGTAAAAGT
AAAGAAGAACTTTATGCATTACTGTCACCCCGGAGTGGTGGTACAAGGAA
GAAAAGTCGGAGAAGTGTCAAAAGTGCAGCCATCACTTCAAGCGAAAGAG
AAATGACAAAACTACCTGAAATCAATTTTGATGAGCGAACTCGGTTATTA
AAATATGAAGTAAGTGATTGCATTTCTTAAAAGTGTTTTTCAGATTTCCA
TTTTTTATTTTGATGTAATTGAAACCAGCAGCTTTTTAAATAATGACAAG
ATAATAGCATAGTGGCGTAGCGGTATAGTGGTTATCATCCTTGACTCCCT
CCTGGGAGGCCCAATTTCGATACCCACCGTGTCTCTACGATTCACTTGGC
AAGTGAATATACCTTCGCCCGGGTCAACCCATGCCATGTGAGGGGAATTG
GGTACCATTACTCTGATACAAGAGTGTGGGTAGATTAGACAGACATTGTG
ACGTGTTGTGGCACTCAGAAGGTTCAGCCTCGCATGAGCATTGCTCTCCC
AGTGTCATTCAAGTGTCATGGTATACGCCATGGCTTGGCAGCTCGTCTGT
CAAGTCGCAGTGTCTGTCAGCGCCGTGATTCCTACTCCTTTGTGGGTAGG
ACCCATCCTGAATGCATTCGGAGAGCTCATATCTATCTATCATATCTATC
TAATAGCATGTCGTATAAAATTTTATTAATGATCATAATGAAATTTGTTT
CCTTTCTAGACAACATCGGTGGATAGTGGTAGTGACAGTGCTTCTAGATA
TACTGCACCTCGCCCTCCCAAACAACCTTCTGCTGGTAGAAGTGTCAGTG
CACACACCTATGGTAGCAAGGCTCCACACCCACCGCCACCAAAGTCAAAG
AAAAAGAAGAAAAGGAAAATTCATAGGGTAAATTGAATTGAATTGTCTGT
TTTATTTCACTTTGCAGAACTTAAGTAAGGGGAGACACTAAGCCTAAGAC
TCCACTTCAGTNATGTTTTATTTCACTTTGCAGAACTTAGGTTAGAGGAG
ACCCTAACCCTAAGACTCCACTTCAGTTAGATGTGCCTAAGAGGTAGGGA
GGGACCCCCTTTTATACCTGGATTATTATTTGCAACTTTTACAGTCTTGA
GTACTAAATGATACCTAAGTTATTGCTTTCAACCGTCTACAGTTCTGTAT
CCAGTATTCAAGTCTTTTTTCAAAAAGGAAGTTGATTGGAATTAATTTTG
TTATTTTCAGGGATTGATGTTAGCAAAGAGTGAACAAATGGTAGCACATC
GTGTACAGGTATGCATCCATTGTTTTGAGTGAATTTTGTTTTATCTCACT
CAGATTGCTTACCTTTCTTTCCTTCTTTCTATTCAATTTAATGGAGGGAT
TTTTAGAAAAAAAATTGTATAAAGTGTGATGAGGAGGGAGGTATATCTGG
ATGTCTGGATATCATTTTTGTGGATATCCAGGGGGAAAAGGTCAAAAGCT
CTTGAATATCCAGGGCAGCTCAGTTGGTAGAGCTTTCGCATTGCAATTCA
AAGTTCGAGGGTTCGATCCCTGACCGTCGCCAACTGTGAATGGTCTGATT
GGGTAATCTGATCTAAGCTCTAGTTTAGACTGCCCACTTTTCGCCCTGCC
TTTCTTAATTGTGAATTAAGGTGATCATAAAGTGGGCTGTCTAAAGTCAA
TGCTTTGCCCTCTTTTGACGTCAATGCAATGTCTTCTTTCAACCTTTTTA
AAGCAAAGAATTTAACTGCCCACTCTGTGCCCGCTTTGTGCCTATTCTTA
CTATTAGAATAGGCAGGGCGAAAAGTGGGCCGTCTAAACTAGAGCTAAGT
TATGATTCTCTTGCAACTGAGCTCTAGCTTAAACGACCGACTCTCTACCC
TACTCCAATCGATTGGGGGCATAAAGTTGTAAGTTGTAAAACTTTGTTTG
AAAAAGATTGAAAAAACATTGTATTGACATCAAAAAGCAATACATTGACT
TTAGACAGCCAGCTTTATGTCCACTTAAGTTCACAGTTAAAATAATCAAA
TCACAAATCTATCTATCTCGTTTCTAACTCACTTTCAGGTTCAATCTATG
GCTGAAGTTACCATGAAATTCTTAGGTTCCAATTTACAATTAGCAAGCGA
TATGTTTCCCGCCAACAAATTATCAGAGATTCAAGTTATTCAACAGCATT
GTGGAGCAAGCACCGTTTGTGTTTTTCGTGAAATGATCCCACCAAATAGT
AAGGACATTCATTTTTTTTTCTTCACTGAAGAAATTCTTCTAGAATAAAT
ACGTAAAAAGTTCCAATTTTCCTAAATCAAAAGTTATAGGCGTTTTTGTG
GGGAAGTTCCCCATTTTACCGCATTTTTTTATCATTTGATCCAAAAAAGT
CGAGACTTAGAAGTTTATTTTAGTTTGAAAATGTGGTATATAGTTCGTGA
ATTCTTAGTCCTTGTAATTTTGCCAGGAATCACAAAAAATCACATTATAA
GGAAAAACTACGGGCTTTTGAGCTTGGTAACATAAAATTGACCAAATTAA
AATCATCTTTTTGCTGATACTAATTTCATTTCTTTTTAGCTGTATTCACT
TTTGTATCTCGCCGTCACCGTGGTTCACCGTTCGGCCTCACCATCAACAT
AGACGGTATCAAAAACATTCGAATCAGTTCGTGTTGCGAATACAAACATA
AACCTGGTTATCGATTGGGTGGTAAAAACAGTCAGTTCGGTTTAATCTCA
GTTCAAGGTGCTGCACCATGTTATAGGTAAGAAATCATGTCTAAAGTTGT
CTTTGACGCTAATGTTACAAACTGTTCATGATTGGTCTTTCCATATCTTG
TATAATCATATATGCATGAGACGCCGTTCAAACAATTTATGAAGTTTCAA
AATCCAATTTTGCCATCTTTAAAAGGGTCAAGGGTGTTTTAGTGTTACGA
TTCATTTTTTTCTAACTTAGATAATCAGCATTCAATTTCAAGTTATTTTT
GGTTTTCACCCTTCCATACAGTATGTATACAACAAAAGAGTTCTTAAAAT
CTTAAAATCAGAAGACTCATTGCAAATGTCTCGGTTATTCAACATTCTTT
ATCTTCATGTTCGTACCANCTAAAATCAGAAGAGTCATTGCAAATGTCTC
GGTTATTCAACATTCTTTATCTTCATGATAAAACTTGCAGTTTGCTTAAG
AATAATTTGCTTCTTATCTTATTCTTAGATGTCAAGTCAGACTGAACCTA
CTGGATAAGAATAACAATGAAGCCGAAAAAGAGGTTTGTTTGTTTGTTAG
TTCTTTCTTTATCATCAGTTTATAATAACTCATAACTTCATTCATTCATT
TAGTCATCTTTTTATTCGTTCTTAAATTCATTCACTCGTTCATGAATTTA
TTCACTCTTTCTTGATTTTACTTAATTCACTCATTCTTAAGTCAGTTCAC
TTGTTCTTAAATCCATTTCGTAATTCTCCTTTTCCCTCTTAGGCTCTTTG
CGCATTCTTAGTTGGTTCAGCGAATGTGGAATGCATAAAATGAAAATTTA
AAAGTTAGGTCCAAACAAGAATTTATTTCATTCGTTTGATGCTTCTCTCT
TCTTAGGCGTCAAGTGACGAAGAAGCGGCTACAAGAAGTTTCGACATCAT
CGTTAGTCGTGGTGGGAAGCGTCAGGAAGCCGTCAGAGAAAGACCTAGTA
AGAAATTGCCACTCTTTCCTTTTCTTATTTATAACGTCATTGAGTGGCCT
GTCTGAAAAATAAAAACCTTGTAAATTGAAGTTTCAGCAAATATTTCACG
TTATGTATTTAGTACCCCGAATAGTAGTTAATCTATATGTCTAGTATGCT
GTCAAGAGTCAAGAGTGCTAATTTAGGACCCATTCATTTCTAAAAAGGCT
TCTACATAGCTTTTCTTTGCAAAATATTGAGTGGGCATGACAACCCTGAC
CCCTCGTAGACGAAGTAATTGAGTCGTAAGATGCTCAATCAAAATTGGAG
AATTTTGAGCAAAATAATCTCATTTAAGCGCTATTAAATTTAGACAACCG
ACACTTTTGGTATGAGTTTGAGCAAGCGTGTGTCAAGATTAAGTTATTAT
GTACCGTTATTTTTTTCTTTCATAGTTTCAGCGAATGTTACAACTCAAAC
AGAGGCATCTTTATTACTCCCAAACTCGCAAGAAGATGACGAGTCACCAA
AAGAAAAAGATGCCGTGGCACTAACAGAACAATATCAAGACGACTTCGAC
GATGACTTTGAAGCCGACGAAAACGACAGTAAAAACGGCGACGATGATTT
AAACGAAAACGTATCATCTTCTTCCGAATCGGATTCGTCGGATAATGAAT
CCGATAAAGATTCCGATACAGAAAGCTCAGATACGGAAAGTGATTCAGAA
AAATATAAATCCGAGGTAAAGCTTTTTTTTGTCCTTCAAATTTATTTATT
AAGTTCATTATCTTTAGACTTGTATTTGAGACGTGACTTGACTATAAACC
TTTTCATAAATTACTTTAAGTACAACGGCTGCCTCGTTTTGAAACCATTG
CCAAGGTGATCAAATCCCTCTAGTCTTCAAGTGTTACTTTAAAAGTGTTA
CTTTAATAAATAGAGTGCACTTCTTATGAACTCCTTTGGGAATCAGTTAC
AATAGCAATATTTTGAAAACGAGGTAAGCGTTGCTCGAGACGTAATTTAT
GACTTCTATCCTGCTGTACAGTCTTCCAGGTTTTGCTGAGTTACATAAAT
TCTGCTTTTTCGGCTATTCCAAGAAATTGTCCACCATGATTGCAGTCTAA
GCCCGAGCCGTATCTAAGGGTGCTATCAAATAGTGCACGGGTCGTGGCGC
TCCTAAGTATGACCTAACGTACCCTTTCCTCAGAATTGGCCGTTTTATGG
AAGAGCAATTGGATTTTTTAGTAAAATTGTTTATGAAAAACTTGATCTGT
TGTAAATGCTTCCAAAAGATATTGTAAATAGCTCAAAACAATATTTTTAG
ACTGTCCTTCAAACTAAAGACTGGTCCCCTCTGCTGGAAGGTCATATACA
AACTCAAATTCAAACTTTTGAGAATAGAATTAACATAAAAGTTAACTTTA
TTGTCTTTCTTTACTCTAGAACTCTGGAGAAAAACAGATGGACAACAGCT
TAACTGAAACGGATGATACGATCACTTCAACCAATCAGCAACGAGATGAA
GAAGACGAGCATCAACCAAGTGACGTTGACGCTCGTTCCGACGCTGATTC
TGATACCGACGTCGCTAAAAAGTCCGACACTTACGACGATCATGATGATC
ATGATGACGATAAAGAACATGTCAATGTAGAACAAGAAGACTCTAAGAAA
CGAGACAGCGATTCAGAGTCGGATAAAGAAAGCGTCAAGTCGGATGGTGA
CGGACGTCGTTCATCGGTATCGTCGGAAAGTGATTCAAGTGATGATAACG
AGAAAGATAAAAACTTGAAGGACAACGAAGAAGAAGTCGAAGGTGATTAT
TTCAAATTTTGAACTTTTAAACGGGGAGAATATGATGGTATTAGGTGACT
TATATGAAATTTTGACGAGTGTTTAAAAGGTATACAGCCCCTGTTATAAT
AACCATTAAATTCTTATTGGGGCTTCTTATCTTATAGTCTAGCAAGCTAG
ACAACTAATTCAGACATAAAGCAAAAAGTAATGGAGGGAACAATTTTATA
CAAGCTAAATCCCGTAACAATAATCGTATTATCATATAACGCCTATACTA
CTGTATTACATGCATTTTAAACGACTCCAGTCTACTTATCTTTGGGCGAA
AATTAGGTTAATTCAGGCTTTTATATTTTTACTACTTTACCCTTTAAATT
TCTCATATTTCTTAATAACTGATTCCAAATTTAGGTTTGTTCTTAAATTG
TTCTACTTATTTTTGGTATTTTTTAACCTTATTCTTATTGTTCTCAAGAA
ATTGTTCTATAAGAAAAAGGATTTAATATACTAATTTTGATATTGATTTT
GTAGAGGGAAAGGATGATGTGAAAGACAACGAAGAACAACATAACGCTAA
ATTAGCTGATGATTTGATAGAGAAAATTGAACACATGAATATAGAAGATG
AACCCGAACATCAACCCAAAGAGGTATAACCACTGATCTCTAGCTACTTG
ACTGGATCGGACTTTCCATTTAAAAGAAAGCGTGTACAGCTTTAGAGCTT
ACTAGTCCGCCATTTTGTTTTCAACTCTGGTCGTTAACAGCGCGATTCGA
ATGTTTTGAATTTCAAACGTTCGAAAATCTGAGATAGAAAACAACATAGA
GGACCAACGGACTTACAAACTGGACACACTTCAACGGAAAATCTGTGACC
TGTTAGTCTCTAGTGTGTAAAGGAATATGATATCTGTGAGCATTACGGAA
ATAATATATGGGCCATCCATATAGTACGTACGCAGTGAAGGGGGGAGAGG
GGGGTTTAGCAAAAGCGTACATCTATTGTTTAAATGACATCATTTCTATT
ATTCTCTGCGTACAAGGGGGAGGGGGTATCAAATTTTTGGAAAATCTTTG
CGTACGTACTATATGGACAAGCTAGAATTCAGAAATATTTAGCTGACCTT
TAAACGTAAGTAAGCAAAGTATTTTCATCTGGTGGCTGTATACGGCTGGC
TCCCAGTAACTTACCACATAGATCAGATTGCCCAATCTAAGCCATTGAGA
TGGCAGTGAACGGGGACTTAAAGATTGACGCTCTATAATTTGATTATCAA
GAATAATCAAAATCATCGAATAAGATAAAAAGCGCTGATTTACCGTCGTT
CTCAGTCAGTCAGGATGTAAACAATTTAGGAGCATACCGTCTCCGTCGTT
TAAAAATACAGATACATAAACTCGGTAATAACAAGGTAATGATAACTGTC
TTCCCAGCTGGCACACAATGTCGTTTCAACGTTTTTCTAATATTCACAAC
GTCCATATAGCGTTAGATGAACATCGAAACAACGTTGTTTGTCTGCTGTC
TTTAACACTATTGTTGTAATTGACCAATCAGGAGAAGCAAGACCACAATG
ATGATGAAGAATCTAACCAATTAGAAGGAAAAGAAGAAGAAGATGTGGAA
AATGAAGATGGTGCTGGTGAATATGAAGAAGAGATGGCGCCAAGTATCCC
GTCAGTTGTCAGTAGAGAAAGCACCATGGTGAGAATAAAAGGGCTTTTCC
AGAAAAAACCGTGCAGCCCCTGTTGAGGAGGTCCAACCTTTTGAGACCTA
CCCCCTTGGAATTCCAGGCAATTTTAGGATCATACTCCTCTGGAATTCCG
AATTTTTACAAATTTTCAATCATTATCCCCTTGGAATTCTGCTTATTTTT
GACGGATTTTCGTCTACCCTTATGGAATTCCACTGCATTTCAAACCTTAC
CCCCTCGGAACGAAAATGGACCTCCTCAACAGGGGGTGCACAATTTTTTT
CTGGAAAAGCCCAATGAAAGTTTTTTTAAATTTGCAATTTTGTATTTTAT
TACTTCGATTAATGAATGATAGACCCTTCCTCATGTTTACATACAGTTAA
CACTCCCTGATTCGATTTCCATCAAATAAGGGAGCGTACCGAATAGCAGA
GCGTCGTTTATGAGAGTTTCTTGTTAACGATGAATTTCAGTAATATCGAA
TAATGGCGGAGGGTATTGAATAGCAGAACGTTATTAGAGAGTGTCATCAG
CACCTCAAAAGAAATCATGTTATGATTATGTTGCCTTAAAGGCTTTGCTT
TGACATAAGTGTTCCCGTTTCATATCAGACACATATTTCATATCGTGACA
ATGTGTGTGTTATGCTGATATAAGCAAAAAATGTTTTTCTTTTCCTCTTT
CTGACCAATCTTGCTCCACATCCGTGTCAATCCAATGCGAAAAAAAATTG
GGAATTAAAATTGATGAGTAAGCAAACGATATCACTCTTATTTAAAAACA
AAACCCTTAAAATCACTGTTGGGTTTTTAATTCGTTCGTTCGTACATTCG
TTTGGTCATACTTTCATCCATCCATCCATTCATTTGTTCGTCCATTCATT
CGTTCGTCTATTCATTCATATATCTCTTCATTTTTCTAGCTAACAGGTAA
CGAAGACGGACGTTTTGAGAGTGAAAACAAAACAATTCAATTCAACGAAG
AAGTCGATGTAGTGGTACGAAGTTTTCTCGTATTTTTTACTGTTACTTAC
TTTCTCCCTTCACNTCTTCATTTTTCTAGCTAACAGGTAACGAAGACGGA
CGTTTTGAGAGTGAAAACAAAACAATTCAATTCAACGAAGAAGTCGATGT
AGTGGTACGAAGTTTTCTCGTATTTTTTACTGTTACTTACCTTCTCCATT
CACTCCTTTCAAAGCTTTTCAAAAGCCCTCTGGTAACCTAGGTCACAGAG
TTTGTGTATGTTTTGTGGGATGATTATAATCGATGTTCAAAGTTCCGTCT
CAGCCGGATTTACTTAAGTATAAAAAGAAGTATAAAAAGAAATAAAACTT
TTACTTTTTACCGTACTAAAAATCCAGCAAAATTTGAAGAACCTTGGCTT
ATTTTCATATGGTGAAAGAAAACTTTACTTCAGCCACTGTCTAATTAATC
CTATAAAACCTTTCCCCATTCTTCCAGCATTATGAGAAAGTTGAAGTTGA
ATCATCAGCCAATGACGGTCACGGAGATTCGTCAGATGACGGAAGTGACG
CCGACGATGACGATGATTTTGACAGCGCGTTAAACAATGGACGTGAGCGT
GTCATCCTGGCAGATCTTGGATTGGATGATGACGATCTTGAAGTGGAAAG
TGACGATATCATTATTGATAGTGACGGTGATATCAAAGAAGTGCCTAAAA
ATAAAGAAGGTACTCTTATCATTGAGTAAATTGTGGAGTAGGGTGATTAA
TTTTACTAATCTACTGTCAAGTAGTGTTAAGTGAAAGTCTTGCTTTAGTT
ATGATTAGGTTTGAGAATTAAGTGAGGCTTAAAGACTCTTTCAGAGACAA
TGGCTTTGAAGTCAAGATATTAAAGAAAGAACATTGATTTACAGCTTCAA
AGTCACAAGAGTAGCTCTTTCAATTTGATAATATTTAACAGCCAAAATGT
ACTGGTTCTTATTTTAAAAAGTGTGCATCGGAGTTATAAGCAGTCAATAC
AGAGGGTGCAAAGGTGGTGTATTGTGGATGTGGGCGTGGTTTATTATTCA
AATAGGCTTGGTTTGTTAGGAATGCGGTTTGGTTTGAATTTGACAACCAC
TTTTTAAAAGACTTCTAAAGATGAAATATAGTTTAAAAGTAAGGGTATGA
TCTGAGGGGTTTTCTCAGCAAGCACTTTCCGAACAGGGACACATTTTCGG
ATTTTTAAGACCACCCCCTTGTTTTGTTTATCAATGTCCCTCTCTCCAAG
CTTCTGTGCATTTTCTCCTCTTTTTTTTCAGTTGATTCAGTATAGAAAGA
TATGAAGCTTGCAGAAGACTGTACGTTGCGAAAGGATTCAGTTAAAAGGA
CTTTTATTATAAAAGTGTAAACTGAGTAATTGATAACAATTAATTTTAAC
ACACTATTAACCCACTTAAAATTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031446XLOC_031446Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049598-exon-scaffold_161-1575043694:103580..104108TCONS_00049598-exon-scaffold_161-1575043694:103580..104108Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:102964..103057TCONS_00049598-exon-scaffold_161-1575043694:102964..103057Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:102558..102683TCONS_00049598-exon-scaffold_161-1575043694:102558..102683Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:101700..101951TCONS_00049598-exon-scaffold_161-1575043694:101700..101951Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:100982..101149TCONS_00049598-exon-scaffold_161-1575043694:100982..101149Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:100601..100648TCONS_00049598-exon-scaffold_161-1575043694:100601..100648Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:99661..99820TCONS_00049598-exon-scaffold_161-1575043694:99661..99820Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:99133..99319TCONS_00049598-exon-scaffold_161-1575043694:99133..99319Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:98626..98680TCONS_00049598-exon-scaffold_161-1575043694:98626..98680Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:98212..98302TCONS_00049598-exon-scaffold_161-1575043694:98212..98302Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:97494..97783TCONS_00049598-exon-scaffold_161-1575043694:97494..97783Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:96417..96789TCONS_00049598-exon-scaffold_161-1575043694:96417..96789Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:95786..95904TCONS_00049598-exon-scaffold_161-1575043694:95786..95904Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:94731..94877TCONS_00049598-exon-scaffold_161-1575043694:94731..94877Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:93605..93679TCONS_00049598-exon-scaffold_161-1575043694:93605..93679Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1575043694:92333..93281TCONS_00049598-exon-scaffold_161-1575043694:92333..93281Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:103580..104108TCONS_00049598-exon-scaffold_161-1510915933:103580..104108Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:102964..103057TCONS_00049598-exon-scaffold_161-1510915933:102964..103057Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:102558..102683TCONS_00049598-exon-scaffold_161-1510915933:102558..102683Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:101700..101951TCONS_00049598-exon-scaffold_161-1510915933:101700..101951Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:100982..101149TCONS_00049598-exon-scaffold_161-1510915933:100982..101149Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:100601..100648TCONS_00049598-exon-scaffold_161-1510915933:100601..100648Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:99661..99820TCONS_00049598-exon-scaffold_161-1510915933:99661..99820Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:99133..99319TCONS_00049598-exon-scaffold_161-1510915933:99133..99319Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:98626..98680TCONS_00049598-exon-scaffold_161-1510915933:98626..98680Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:98212..98302TCONS_00049598-exon-scaffold_161-1510915933:98212..98302Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:97494..97783TCONS_00049598-exon-scaffold_161-1510915933:97494..97783Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:96417..96789TCONS_00049598-exon-scaffold_161-1510915933:96417..96789Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:95786..95904TCONS_00049598-exon-scaffold_161-1510915933:95786..95904Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:94731..94877TCONS_00049598-exon-scaffold_161-1510915933:94731..94877Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:93605..93679TCONS_00049598-exon-scaffold_161-1510915933:93605..93679Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1510915933:92333..93281TCONS_00049598-exon-scaffold_161-1510915933:92333..93281Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:103580..104108TCONS_00049598-exon-scaffold_161-1491911889:103580..104108Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:102964..103057TCONS_00049598-exon-scaffold_161-1491911889:102964..103057Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:102558..102683TCONS_00049598-exon-scaffold_161-1491911889:102558..102683Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:101700..101951TCONS_00049598-exon-scaffold_161-1491911889:101700..101951Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:100982..101149TCONS_00049598-exon-scaffold_161-1491911889:100982..101149Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:100601..100648TCONS_00049598-exon-scaffold_161-1491911889:100601..100648Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:99661..99820TCONS_00049598-exon-scaffold_161-1491911889:99661..99820Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:99133..99319TCONS_00049598-exon-scaffold_161-1491911889:99133..99319Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:98626..98680TCONS_00049598-exon-scaffold_161-1491911889:98626..98680Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:98212..98302TCONS_00049598-exon-scaffold_161-1491911889:98212..98302Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:97494..97783TCONS_00049598-exon-scaffold_161-1491911889:97494..97783Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:96417..96789TCONS_00049598-exon-scaffold_161-1491911889:96417..96789Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:95786..95904TCONS_00049598-exon-scaffold_161-1491911889:95786..95904Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:94731..94877TCONS_00049598-exon-scaffold_161-1491911889:94731..94877Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:93605..93679TCONS_00049598-exon-scaffold_161-1491911889:93605..93679Clytia hemisphaericaexon
TCONS_00049598-exon-scaffold_161-1491911889:92333..93281TCONS_00049598-exon-scaffold_161-1491911889:92333..93281Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_161supercontigscaffold_161:92333..104108 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.0073	1.05691	0.779904	0.675908	4.99661	4.83621	7.58365	7.04486	4.8458	5.95772	4.00914	3.84301	3.024	3.05048	1.31225	2.45112	2.87458	3.49213	4.92441	5.10911	3.56018	3.44144	1.96881	2.86896	9.23889	8.69336	2.93291	1.67243	1.814	1.69893
Blast
[Close]
BLAST of TCONS_00049598 vs. Swiss-Prot (Human)
Match: ERIC3 (Glutamate-rich protein 3 OS=Homo sapiens GN=ERICH3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 7.747e-31
Identity = 54/125 (43.20%), Postives = 81/125 (64.80%), Query Frame = 3 
Query: 1206 HRVQVQSMAEVTMKFLGSNLQLASDMFPANKLSEIQVIQQHCGASTVCVFREMIPPNTVFTFVSRRHRGSPFGLTINIDGIKNIRISSCCEYKHKPGYRLGGKNSQFGLISVQGAAPCYRCQVRL 1580
            H+  + S A +TM +LG N+ L+SD    +   EI+V QQHCG   +CV++  +     F F+S+RH G PF LT  ++G++  R+SSCCEYKH+ G RLGGK   FG + V+ ++PCY+C + +
Sbjct:  279 HKTSLHSNAAITMIYLGKNVHLSSDN--PDFRDEIKVYQQHCGGENLCVYKGKLLEKETFQFISKRHHGFPFSLTFFLNGMQVNRLSSCCEYKHRKGSRLGGKRGYFGFVCVERSSPCYKCIIAM 401

HSP 2 Score: 122.094 bits (305), Expect = 1.031e-27
Identity = 58/119 (48.74%), Postives = 85/119 (71.43%), Query Frame = 3 
Query:  516 SYTAGQFANYNSLTDKNLSGYFANTQMRKHLVRSGLITKNGKITSENSYRLKIAKREHREHVKDLLATAIVEKALDMERMRQYEIRKKLDELYKIELVNKVRSERGGKSKEELYALLSP 872
            S+ AG  A YNSL DK+L+GYF NT++R+HL+RSGLIT++G+I SE  Y+L + KR+H++++++ LA AI  K LDMER  Q EI+KKL+ L + E + + + E   +S E    +LSP
Sbjct:    4 SHPAGLLAAYNSLMDKHLAGYFNNTRIRRHLLRSGLITRSGRILSEKEYKLNMMKRDHQKYIRECLAQAIFHKVLDMERYHQLEIKKKLETLARKERIQRFKGEHTRRSVENNMPILSP 122
The following BLAST results are available for this feature:
BLAST of TCONS_00049598 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERIC37.747e-3143.20Glutamate-rich protein 3 OS=Homo sapiens GN=ERICH3... [more]
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