TCONS_00049906 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049906
Unique NameTCONS_00049906
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1174

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049906 ID=TCONS_00049906|Name=TCONS_00049906|organism=Clytia hemisphaerica|type=transcript|length=1174bp
TTATcgcagtttttgatttttctaaaaaagcgatgcattgtgggattgtt
tcgagtgtattcgCTCTAACCATCATAAAGAATCACAATTCGTTCCAGTC
AAACTTACAAGGTGCGCAAAGAGGTTTGATTGAAGGATAGTTAAACAGAA
GAGAAGCAACATGAAACTTTTTCTCATAGTGCTTGTTGCAGTTCTTTCCA
CGATAGAAGCCTATGATGATGATGGCTTTTTCAATATCGCTCACATGTGT
AACAATATACAAACGTTGGATTGGGCCGTCAAACAGGGTGCAAATGCAAT
CGAGGCTGACTTACAATTTGATCATCTAGCAAGACCGTCCAGATTTTATC
ATGGGCTTCCATGTGATTGTAATTGCATGTGCAATTTTTATTCAACTTGC
AAGTGGTTTATGTCACACACAGTTTGTTATCCATTGAGCAAGAAAAGTAA
CAATTGCAAAGCTGCTTCCAGAACTGATCTATGGCTTAGGAGGGCAGcaA
CAAAACATTCATCGAAAATTGCACTTCTTTGGTTCGACAGTAAAATCAAG
GGAAACGGATATTCTGATGAAAAGCTAAGACTTGCAGCtagaaatctTAT
CAAACTGTTAACACAACTTATTTAGCCTCTGCTATAAAGGAATAGTGTTG
ATAGGCGCAGAGGGTCATGAAATAACCTCTTACTTTGATGAGATCTCCAA
GACAAACAGCACCTTCAAAGATCGCATTTACGTCACAATGGACAATGTTA
CAATGAAAACTGCTCGAAATGCTTTGGACTTTGGCAATTTCAAGAATATC
GTTTACAACAACGGCATGACAGCTTGCTTGCCGAAACAAATCAAAAGCAC
ATTATTGACAGCCATCAAGGATAATGTTGATAACGGAGTGTTCAGTGCAG
CCTTTACATGGAGTTACAATTGGAAGAGACCCATGCAAAGAGTGGCTCCT
TACTTCAATGGCATCATCACAAACAGTCCATCCTACCTCAGACAAGTTGT
CAAAAATGAAGGTCTTCGTTTGGCAGTACCAGGTGAACGTTTACCAAAAG
CCACAAGTTCGCTTGTTGAAGACGTTCCAGATGANTTAATATTGTTTTCT
CCAGGTCTTCGTATGGCAGTACCAGGTGAACGTTTACCAAAAGCCACAAG
TTCGCTTGTTGAAGACGTTCCAGA
Run BLAST on NCBI

protein sequence of TCONS_00049906-protein

>TCONS_00049906-protein ID=TCONS_00049906-protein|Name=TCONS_00049906-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp
MKLFLIVLVAVLSTIEAYDDDGFFNIAHMCNNIQTLDWAVKQGANAIEAD
LQFDHLARPSRFYHGLPCDCNCMCNFYSTCKWFMSHTVCYPLSKKSNNCK
AASRTDLWLRRAATKHSSKIALLWFDSKIKGNGYSDEKLRLAARNLIKLL
TQLI
Run BLAST on NCBI

transcript from alignment at scaffold_167:534657..548189+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049906 ID=TCONS_00049906|Name=TCONS_00049906|organism=Clytia hemisphaerica|type=transcript|length=13533bp|location=Sequence derived from alignment at scaffold_167:534657..548189+ (Clytia hemisphaerica)
TTATcgcagtttttgatttttctaaaaaagcgatgcattgtgggattgtt
tcgagtgtattcgCTCTAACCATCATAAAGAATCACAATTCGTTCCAGTC
AAACTTACAAGGTGCGCAAAGAGGTTTGATTGAAGGATAGTTAAACAGAA
GAGAAGCAACATGAAACTTTTTCTCATAGTGCTTGTTGCAGTTCTTTCCA
CGATAGAAGGTTTGTAGATATGTTGTTGCTGttgtaacttttttctaaaC
ATTTAATCAGTTCTACAGTTTTTCATTATAATGAACCTTtagagttcctt
atttacttaGATGTCAAGATTGGATTTGCTAAGTATGTAACTTATGTATA
AGTATAACAATGGACTACACTACAGAAAAAGATGTTTACTGAATGTTGCT
TCGTCAATATTTTGTCACCTTTTTGTTTAGGCTTTTGTAAATGCGTGCAA
GTTCAAGTTTGATTCTCTGTTccttaacttgttttcttattctcagcttg
accagttccttaacaattccttatttttggaaccattttcagcctcaagt
tccttataaacgtgctccttattaaaaaacgtgtatctttaAATCCAATT
AATTCCAAAAAaccCTCCTAGAATAGTACCGTATTTACATAggtataaca
atccaaaagttcttttaaaaaacaaacgcGCCAAGATGACAAAAAGTGGC
TTTAACGCAACACTTATCCAAATATTTGCGATTTTGGCACTTTTGATAAT
AGTTAAGAAGGGAACTCCTGGATTGTTATAGGCAAGCACGTTCAATATGG
TGACTTGCCTGGGTTTTCTCCAAAAAATTAAATGGAATGGTTAAACTTTT
GGTTCCAACGTAATCTCGTTTTCAATAAGTCTGCCCTTTTTCAACACCTT
TTATATCGAGATACCGGTAGATGTAACTTTCCAAAATTGCATGAAATCAA
GCATCGACATCTAACGGGGTCAACTTCTAGAGGTCGACGAATCAATCATT
ACCCAGCATCAAAACACCCCTTCTAACAGACACGCTGAGACCCTttccca
ttggaaaaattggcccgttcccggtggaaaaattggccaaaatatcgttc
ccggtggaaaatttttctccaatttttgtccacaccgaaaataatcaaat
aaccaatcctcgctgcaaaatattatgctaatttttccatccccactgaa
ttttgtgacttgaaaacaaaagaattgaaatccccacctataaaaaattg
gagtattaatgcccatcgagtttcagtctgttatttttatccccactggc
tgaaaaaatcctaccggttctgtgagaaggaggtgtatCAAAAGATTACA
GTGTTTCATAAAAAAGACAAGATAATAACGATTTCCGTATTTTCTCTTAG
CCTATGATGATGATGGCTTTTTCAATATCGCTCACATGTGTAACAATATA
CAAACGTTGGATTGGGCCGTCAAACAGGGTGCAAATGCAATCGAGGCTGA
CTTACAATTTGATCATCTAGCAAGACCGTCCAGATTTTATCATGGGCTTC
CATGTGATTGTAATTGCATGTGCAATTTGTAAGTTGATTTTAATTCGAAG
CTTTACGCAGAATAGTTTGAAAATATCGTATTTAAGGCTTTCCAAAAGTT
CGCTGAACATTCAAATCGCTTTTTGTGAGCTCCTTTGACTGATCGAATCA
GAATTTactaaatttgacaaattgaaattatttgaatGTTAAGCAAACTC
ATGGAAAGTTAGCCATAACTACGGTTTCAATGAAGTAATTAAACAGGACC
ATAAAATTTGGCATATAATTCACGAGCAATCTTCAATATAAGTATATAAG
GGGTGTTCCTATAAGGTCTAGGGTACCCCCATTTGGAACCTCAATTGGAC
TACTTATTGGGGTGCCTCTTTTTGCACTAAATTTTACAAACTGATGCTTA
TAAGTTCATGATAGAATGATACTAAAATCTTCGATTGATAATTTACAAAA
ATCAGAAGATTGCCATAAAACTTGAGTCGTAATAGTCATTTTCCCAAAAG
TACTGAAATCTACAACCTACTATTTTTTATCATGGTCAAGCgattgtcaa
attcaaaaagtgtaTACACACATGTCAGTCTTGAAGGGTTACTTAAGACT
TGTATAAGTAAAAGTAGGCATTAAACCTTAAAAATCCTCAGTTCTACAGT
AGAAATAAgaaacaatttcaggctaaaaatgctcaaaaaagaaTAGCCCA
GAAAAATTGACTggctcttaaaaaaaaaagatgtagatttatagaaaaat
ttattaagacaaaaatacaaaagtacTCCGTGCTCAAATAATCATTTCTG
TTTTTTAGTTATTCAACTTGCAAGTGGTTTATGTCACACACAGTTTGTTA
TCCATTGAGCAAGAAAAGTAACAATTGCAAAGCTGCTTCCAGAACTGATC
TATGGCTTAGGAGGGCAGGTACGATAAAATTTATCCTTTGGCAGTAAAGT
CTCCATAAGTTAACCTGATAgtagctgttcataattttcttacgcacacg
gtaaacctctgaaggcacttgaaaattatacatctgaggaaaatagtcct
cccgcagaaaattctacaacaagaatcttgttgtgcgccggaaagtcaaa
actgatacggcgccctattcataaacacaatcacgcaactttgttgtcat
tcccagtccatttagacgaacgcggtccttacgatttcgagattgcatat
tcgtcagattgtttgtttttagAGCCTTTAGAGCTTCAGTGCGTGAtgtg
cagaaaacaatcacaatctgatctcaggttaccaTAAGTCGAACGGCAAG
GGGAACAGGAAAcctttgagttatggagactcgtGTGCTATTTGTGGTTT
TTAAAGGTATAGATCGCAATGTACTAGTCTAGGGATAGGAAGAGTTAAGT
ATAGCGGGAATTGGTTAAGAACATGTAGTCTTACGCTGCCATAAATCTAA
CTCGTTCTATTGGTCCCAAAATAGAAatgattatatatttttataaggGT
TGATGTTCGAGTTTCGGATAGGTCATCCCGTCACCTAATTGCAAATCAAG
CATACCTGGTTTGTCTGTATAAAATTTAATAAGAATTGAtaagaattgat
ttttttcagcaACAAAACATTCATCGAAAATTGCACTTCTTTGGTTCGAC
AGTAAAATCAAGGGAAACGGATATTCTGATGAAAAGCTAAGACTTGCAGC
tagaaatgtaaaaaaattatttactttTAGATTTCTTTAAATCTCGGTAA
GGGGATCTTTTGTCATTCAGGGGCTAGAGTNGATTTTAGATTTCTTTAAA
TCTCGGTAAAGATCCCCAGGGGCTAGAGTTGAAACTGTGGGATTAGGAAC
GGGGCCGTATATTACCTGTCAGCCTGTGTGATTTTCGCACAAAttccaga
ttgaaagtaaaatcctaaaatatgaaaagtaaaaaaaaacactacatttA
ATTAATCATTCCAAAAGCGGCATAAATCTTATTCGGTGCTCCACCtaagc
aaaataaataaattccggACAATACGtcaaatatgtttttcttttcagct
TATCAAACTGTTAACACAACTTATTTAGCCTCTGCTATAAAGGAATAGTG
TTGATAGGCGCAGAGGGTCATGAAATAACCTCTTACTTTGATGAGATCTC
CAAGACAAACAGCACCTTCAAAGATCGCATTTACGTCACAATGGACAATG
TTACAATGAAAACTGCTCGAAATGCTTTGGACTTTGGCAATTTCAAGAAT
ATCGTTTACAACAACGGCATGACAGCTTGCTTGCCGAAACAAATCAAAAG
CACATTATTGACAGCCATCAAGGATAATGTTGATAACGGTAcgaatttta
aacaatttttgggTTGGTGTTCTGAAATATTGTTCCAGATCTTAGTACTT
TGGAACATAAGATACCCGCGTCACGgcggcaaaatatggtcaaaatTCTC
CCACTATCCTCAATTTAGCTTATATATTGTTTTTATGTTGCCAAACCAAT
GGATATTCATAAATGttatgattttccaaaaaaaattcaaaatttgaaaa
ttttcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AAAATCTGAAGCCGAAATATcgagttttaaaggtttttgaagACTGGGAC
GAGGTTGCTAAATTTAAAACTggcaaatttccagggggttatgtcgaaaa
attgtcaaaattttttttattggcttAAACGACTGCAAATCatcttttct
tttgataaagtAACATTCTAAGAGAGTAAAAGgcgtagtttttttttaaa
tataagaggaaagattgaattttatgagagtttctactgaaaattaaagt
ttactagctgtattgtataagggttgcgaagcgatccagactccacctca
attcgcaagttgctagcaaaataataGAGACTCTGATAAAACTCCGAAAG
AAACAGGGTCTTAAGCCTTATAATACTCCAAACACACCACACAAACCTCG
GCGGCACAACTCCCGCCGCCCCGCGCAACAATCTTTCTTTCATTCTAGTT
CTTCtaatgtaaatggtgccttaaaaaatctaacgatattcgtcgaacgt
tcgaacatttttattcgaatcgtctgcgtctgtcgaaatcatcaaaagta
aacaaaagcaaaaatctATAAAGATGACTTGGATCTTGgtcagttttgat
ttgttttcttgacaaattcgacaaatttgattacctccgtacctctttat
cattgaatatccacttggttttgcaaggtaagtttagtTCACTTAAAAGA
GCACTTTTTCCCGCCCGGACGGCGACCAGCAAAAACTTCTCATTTATTGa
tcttatttgatacttgatagttaattttaaaagtcaaggaatgatgaaga
tcctttctgtcatctttcaaacaatttttttccatttaacaacaaaataa
acatttaaaaccgaagaaccactgtttagatgcgtgccgcccgcgcggca
atttgatcaacttcagatttcaAGTCCGTGTTTTGGCTTCCGGTAGtttt
tttgctgttcactgctagggtacaccattttaaaacggcatttttcgcag
tcctagctaccaaaccgagaaaatttTCGTGGCTTCAACCCAAACCCTTT
AAGCTCATTTTGACAAAATcgtcggtttgaagatgtgatttatatagcaa
attttgggccaattttcgcttgggaaagaagttaaaggtacgtgcacaca
atatagcaaaactgcttcgctcataaattcgcttcgcaaaaagttatttt
actcaaaactttagtttttgaaattcCACACCCTATTTAAACCTGTTTAA
ACACCCTCTTAGAGTTGTCGTAAAATCACCAAATTTGGTAGGGAGACTCC
CTatgagaaaataacaattttgagctttagaattttttttattccgNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNACCCGATTTTGACCCCCGTCTTTTTAAAGAATGTTGCCTAGCAACA
AGATAAAGGCCTAAAATGAAAAAGTCTCAAGcccaaaaattttgcttttg
tttaaaccttactccataccAAATTTCAAATCTGTAGCTTATCGGCAACA
TATTGTTTAAATACCCCCTAAGCATTTCCAAGCCAAATTGCCTAATCGAT
CGTTGTTTTTTACCTTATATTACCTAAAATAGGGTGTGGCGTCAAAaccc
aaagtcaaaaaattcaagatgtagtatttttttgtgaaaatttaacctat
tccaagacattttgcacaatttttaaggtcagaagtccaaaattggttGT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCttaaaaattgtg
caaaatgtcttggaataggttaaattttcacaaaaaaatactacatcttg
aattttttgacttcacCTAAAAAATGGCTGTTGATGCCACACCCTAccta
aaaattcaatttctcgACTTTGGAATTGATCTAAATAAAAAGTGACACCA
TTTTCAAACACTAATCATCGAGAGCTATCGGATGAAGCTATTACTTTTAC
GCtatttcgaagttttttttccttcaaaattttgatgacgtcattttttg
gtcacgtgataattttcttttcaaaaaaatttttcaactttttttggaaa
aatgtttcaaaggtTGATATGGTAAGAAATGTTGTGTAGTCTATATAACA
ATCAAAAAACACCCTTGTTCAACAAGGTTGCTCAGCAAGTGGGAGAAAAA
CAGCCAAAAATGACCACCGTTCCAATTCTTTGATTTCTACTCTTTCTTTT
TCACCGAACTTTCTGGCAACCTTTCCTATTAATATAGGACTATTCAGAAA
GAAAACTTAGTTGAATACAGTATTTAGGATTCGTATTTATAGAAGAATTT
TCGCCGGGACTGCTTTAACCCGCTACAATGAGTCAATCCACACATATGTC
AACTTGTTTATGCAGGAGTGTTCAGTGCAGCCTTTACATGGAGTTACAAT
TGGAAGAGACCCATGCAAAGAGTGGCTCCTTACTTCAATGGCATCATCAC
AAACAGTCCATCCTACCTCAGACAAGTTGTCAAAAATGAAGGTTAgctgt
ttttttattgttgaaTATACTCGGGTAAGAAATGGAATGTCTCAAAGACA
TGGAAGTCCAAATTTCACGGTTCCATttgccaaactggagttatttaaaa
aacaagttttgctgacgtcagccatttttagtttttgcagtttttcgcga
aaatgaggACTAAAAAATTAGGTAACACCCTTACAGTGAAACTTTATCAT
GGTACCCTTCGTATTAAATCATTGGTTTGCTTATTTTCCGCCGGCCAATG
CTTTCCgaaatttttggtaattttcatgtttttgagacGTGCCACAACTT
ACCTGAGTAAACAATACTTATTTACTTAATCTTTGTCACTCAAGTCTGTC
CCTtgtatctatatattaatagcagtattctgtatgtcgttttgtctgtc
tgtatgttatactttcgttttcgcacgcaatgtttttgttcttccaaaag
ataacttttagttcttgctccacaaatgtgttaaatcagattcgcgccgt
tttataaagactttgttttgattgatagattagactttttctttttttct
ttctttctttacttttgttttatgttttcgaatgtaattaacgaccttat
ttgatttgagacattcgaattcttttcaaaacaaaagaaatcttttaaat
agaatctgttaaagaaaagaacaaatataaaataaaacacaagaatcaca
taacaagtttgttagaacaacagcaacattaaaaatacattcaaaaggcg
gtaaaaactagaattctttcttcgtaaaataggaactttaaacatgtatg
tcgataattattttgctgtaaatctaagtcattgttgaatttgaaaaatt
attgaagttatgacgaagttattttataaaaagcaNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaacaagg
gaaattgtgtgaattttaattcactttttggaactaatttgaccaaattt
ctatctttctggtggcaaaaagttgaaattttcctatttttccaattcga
agtttgattttccgatttttcaaactgccatgtttcaaaaaaggcaccct
taaggccggcacatacccatacccatacccttctcttgcctaagtacccc
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NNtggtcgccggtatggtgtaatttgggaatgacgccctttctgttttct
gatcatttttgccacaaaaatatttttcaaaatatggttaaaagatacgt
caaccaggagggatagagtcaaaatttgaagagaattctttcctttaatt
ttgatttgatcgtgtttaagccaccttcccaacatctcaaagggctttaa
atgcgttcagcaaacagctaaaccggcgtgcgacgctgggtaccggctag
tctatatattaatagcggtattctgtatgtcgttttgtctgtctgtatgt
tatactttcgttttcacacgcaatgtttttgttcttccaaaagataactt
ttagttcttgctccacaaatttgtttaacgatattcgcgccgttttataa
agactttgttttgattgatagattaggctttttctttttttttctttctt
ttcttttgttttatgttttcaaaTGTAATTGACGACtgtttgatttgaga
cattcgaattcttttcaaaacaaaagaaatcttttaaacagaatctgtta
aagaaaagaacaaatataaaataaaacacaagaaacaCAAGACAAagttg
ttagaacaacagcaacattaaaaatacattcaaaaggcggtaaaaactag
aattctttcttcgtaaaaagggacctttaaacatgtcgATAatcattttg
ctgtaaatctaagtcattgttgaatttgaaaaattattgaagttatgacg
aagttattttatcaCGCTTtgttgtctgcgtgtcctagctgccttctgGG
TTGACTATGGTTACGAGCTGACTTTCagccctgcccctcggacccttagc
agaataaagaggagaagaaacaagggaaattgtgtgaattttgattcact
ttttggaactaatttgaccaaatttcaatctTTCTGGGAAAAAAGTTGGA
ATTTATTCCTATTTTCccaattcttagtgggactgaagtttgattttccg
atttttcaaactgccatgtttcaaaatggcacccataaggccggcacata
tccatacccttctcttgcctgagaaccCCCTCCCCCgtgctgcctttttt
cgacgaatcgcgtgtcatgtctattatttcactccgcttatcttgacagg
aaagttttcctaaacatcaagaactagggcaaatataacgcgagcgaagc
gagaaaaaaaatctaattgcagagccgtctcggacgtcgctggtcaccgg
tatggtgtaatttgggaatgacgccctttctgttttctgatcatttttgt
cacaaaaatctttttcaaaatatggttataaaagatacgtcacccgggag
gggtagagtcaaactttgaagagaattcgtccctttaattttgatttcat
cgtgtttaagccaccttcccaacatctcaaaggactttaaatgcgttcag
caaacagctaaaccagcgtgcgacgccgggtaccggctagtatcaTATAT
TAGCCGTATGAAGAATAACCTTATCTTAGTGCAATGATATGTTCAAATGG
CTCCATATCTCTTATTATTTGATTGGATCGTACTTGAGACTATAGCTAAA
ACCATGTCTCAGGCCTCGGTGGCGTGTTTGATACCTTACTTGGGTAACCT
TACAGgggtttttctttgtttttggtaggctGGCGATAAAAAAATTAACT
CTTGTGACTTCTAGATACTAAGCCAGCGAGTTCTTAGCAAGTGTATTAGc
gtaaatatgtacttgaggcaACGAACCTAATTTTTCGAGTGGTGAATTGT
ATcttttttcgtgccttggacCGGTGAAATTCGCTGTTCGCCGGGCCTAA
AAAGACCCCTTTTGAACACTTTTTAAAATCTATAAATTTTACTGGCTATG
AGCCTCATTACCAAATCTCATCAGGAATCCGAATCCGATTTACTGATTGC
TGGATGAAGGGCTTTTCCCTGGGTTTGCAAAGGATATGGATAAAGTCAGA
TTTATCAATACTTCACCGCTGTTACAGGTATTGATCCCTCTGCGGTTAAt
actttttagggttttttcaagttatttttgaatACTAAACTTATTCATAT
GTTAATATTGTTTTCTCCAGGTCTTCGTTTGGCAGTACCAGGTGAACGTT
TACCAAAAGCCACAAGTTCGCTTGTTGAAGACGTTCCAGATGANTTAATA
TTGTTTTCTCCAGGTCTTCGTATGGCAGTACCAGGTGAACGTTTACCAAA
AGCCACAAGTTCGCTTGTTGAAGACGTTCCAGA

Coding sequence (CDS) from alignment at scaffold_167:534657..548189+

>TCONS_00049906 ID=TCONS_00049906|Name=TCONS_00049906|organism=Clytia hemisphaerica|type=CDS|length=2325bp|location=Sequence derived from alignment at scaffold_167:534657..548189+ (Clytia hemisphaerica)
ATGAAACTTTTTCTCATAGTGCTTGTTGCAGTTCTTTCCACGATAGAAGC
CTATGATGATGATGGCTTTTTCAATATCGCTCACATGTGTAACAATATAC
AAACGTTGGATTGGGCCGTCAAACAGGGTGCAAATGCAATCGAGGCTGAC
TTACAATTTGATCATCTAGCAAGACCGTCCAGATTTTATCATGGGCTTCC
ATGTGATTGTAATTGCATGTGCAATTTTTATTCAACTTGCAAGTGGTTTA
TGTCACACACAGTTTGTTATCCATTGAGCAAGAAAAGTAACAATTGCAAA
GCTGCTTCCAGAACTGATCTATGGCTTAGGAGGGCAGcaACAAAACATTC
ATCGAAAATTGCACTTCTTTGGTTCGACAGTAAAATCAAGGGAAACGGAT
ATTCTGATGAAAAGCTAAGACTTGCAGCtagaaatctTATCAAACTGTTA
ACACAACTTATTTAGATGAAACTTTTTCTCATAGTGCTTGTTGCAGTTCT
TTCCACGATAGAAGCCTATGATGATGATGGCTTTTTCAATATCGCTCACA
TGTGTAACAATATACAAACGTTGGATTGGGCCGTCAAACAGGGTGCAAAT
GCAATCGAGGCTGACTTACAATTTGATCATCTAGCAAGACCGTCCAGATT
TTATCATGGGCTTCCATGTGATTGTAATTGCATGTGCAATTTTTATTCAA
CTTGCAAGTGGTTTATGTCACACACAGTTTGTTATCCATTGAGCAAGAAA
AGTAACAATTGCAAAGCTGCTTCCAGAACTGATCTATGGCTTAGGAGGGC
AGcaACAAAACATTCATCGAAAATTGCACTTCTTTGGTTCGACAGTAAAA
TCAAGGGAAACGGATATTCTGATGAAAAGCTAAGACTTGCAGCtagaaat
ctTATCAAACTGTTAACACAACTTATTTAGATGAAACTTTTTCTCATAGT
GCTTGTTGCAGTTCTTTCCACGATAGAAGCCTATGATGATGATGGCTTTT
TCAATATCGCTCACATGTGTAACAATATACAAACGTTGGATTGGGCCGTC
AAACAGGGTGCAAATGCAATCGAGGCTGACTTACAATTTGATCATCTAGC
AAGACCGTCCAGATTTTATCATGGGCTTCCATGTGATTGTAATTGCATGT
GCAATTTTTATTCAACTTGCAAGTGGTTTATGTCACACACAGTTTGTTAT
CCATTGAGCAAGAAAAGTAACAATTGCAAAGCTGCTTCCAGAACTGATCT
ATGGCTTAGGAGGGCAGcaACAAAACATTCATCGAAAATTGCACTTCTTT
GGTTCGACAGTAAAATCAAGGGAAACGGATATTCTGATGAAAAGCTAAGA
CTTGCAGCtagaaatctTATCAAACTGTTAACACAACTTATTTAGATGAA
ACTTTTTCTCATAGTGCTTGTTGCAGTTCTTTCCACGATAGAAGCCTATG
ATGATGATGGCTTTTTCAATATCGCTCACATGTGTAACAATATACAAACG
TTGGATTGGGCCGTCAAACAGGGTGCAAATGCAATCGAGGCTGACTTACA
ATTTGATCATCTAGCAAGACCGTCCAGATTTTATCATGGGCTTCCATGTG
ATTGTAATTGCATGTGCAATTTTTATTCAACTTGCAAGTGGTTTATGTCA
CACACAGTTTGTTATCCATTGAGCAAGAAAAGTAACAATTGCAAAGCTGC
TTCCAGAACTGATCTATGGCTTAGGAGGGCAGcaACAAAACATTCATCGA
AAATTGCACTTCTTTGGTTCGACAGTAAAATCAAGGGAAACGGATATTCT
GATGAAAAGCTAAGACTTGCAGCtagaaatctTATCAAACTGTTAACACA
ACTTATTTAGATGAAACTTTTTCTCATAGTGCTTGTTGCAGTTCTTTCCA
CGATAGAAGCCTATGATGATGATGGCTTTTTCAATATCGCTCACATGTGT
AACAATATACAAACGTTGGATTGGGCCGTCAAACAGGGTGCAAATGCAAT
CGAGGCTGACTTACAATTTGATCATCTAGCAAGACCGTCCAGATTTTATC
ATGGGCTTCCATGTGATTGTAATTGCATGTGCAATTTTTATTCAACTTGC
AAGTGGTTTATGTCACACACAGTTTGTTATCCATTGAGCAAGAAAAGTAA
CAATTGCAAAGCTGCTTCCAGAACTGATCTATGGCTTAGGAGGGCAGcaA
CAAAACATTCATCGAAAATTGCACTTCTTTGGTTCGACAGTAAAATCAAG
GGAAACGGATATTCTGATGAAAAGCTAAGACTTGCAGCtagaaatctTAT
CAAACTGTTAACACAACTTATTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031635XLOC_031635Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049906-exon-scaffold_167-1491911889:534657..534865TCONS_00049906-exon-scaffold_167-1491911889:534657..534865Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1510915933:534657..534865TCONS_00049906-exon-scaffold_167-1510915933:534657..534865Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1575043694:534657..534865TCONS_00049906-exon-scaffold_167-1575043694:534657..534865Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1491911889:536057..536234TCONS_00049906-exon-scaffold_167-1491911889:536057..536234Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1510915933:536057..536234TCONS_00049906-exon-scaffold_167-1510915933:536057..536234Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1575043694:536057..536234TCONS_00049906-exon-scaffold_167-1575043694:536057..536234Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1491911889:537015..537124TCONS_00049906-exon-scaffold_167-1491911889:537015..537124Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1510915933:537015..537124TCONS_00049906-exon-scaffold_167-1510915933:537015..537124Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1575043694:537015..537124TCONS_00049906-exon-scaffold_167-1575043694:537015..537124Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1491911889:537816..537913TCONS_00049906-exon-scaffold_167-1491911889:537816..537913Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1510915933:537816..537913TCONS_00049906-exon-scaffold_167-1510915933:537816..537913Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1575043694:537816..537913TCONS_00049906-exon-scaffold_167-1575043694:537816..537913Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1491911889:538255..538544TCONS_00049906-exon-scaffold_167-1491911889:538255..538544Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1510915933:538255..538544TCONS_00049906-exon-scaffold_167-1510915933:538255..538544Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1575043694:538255..538544TCONS_00049906-exon-scaffold_167-1575043694:538255..538544Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1491911889:543822..543947TCONS_00049906-exon-scaffold_167-1491911889:543822..543947Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1510915933:543822..543947TCONS_00049906-exon-scaffold_167-1510915933:543822..543947Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1575043694:543822..543947TCONS_00049906-exon-scaffold_167-1575043694:543822..543947Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1491911889:548027..548189TCONS_00049906-exon-scaffold_167-1491911889:548027..548189Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1510915933:548027..548189TCONS_00049906-exon-scaffold_167-1510915933:548027..548189Clytia hemisphaericaexon
TCONS_00049906-exon-scaffold_167-1575043694:548027..548189TCONS_00049906-exon-scaffold_167-1575043694:548027..548189Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049906-proteinTCONS_00049906-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:534657..548189 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0736323	0.0358557	0	0.122486	0.0495942	0.0783626	0.141834	0.0442568	0.186104	0.384205	0.596063	0.39196	0.46524	0.660774	0.334215	0.71746	2.1554	4.21822	0.391559	0.0409067	2.59901	2.24079	0.421916	0.53738	56.4146	18.2507	0.404443	0.270579	0.0408963	0.0416445
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049906 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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