TCONS_00049937 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049937
Unique NameTCONS_00049937
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4246

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049937 ID=TCONS_00049937|Name=TCONS_00049937|organism=Clytia hemisphaerica|type=transcript|length=4246bp
AAAAGACTCGAGCCATATCTCACTGTGAATTTATCTTTCAGAGAATAAAT
AAACCaatatcaaaaaaaaacaaatcaaaacaaatacatCAGAAGACAAG
CACCTAATCGCATCTTAAATTGTTTATTAATGCCTGTCTTTGCATTCGAA
TCAGCCATGGCGTGCTTATCAGCCGAAATTACTGCCAACAATCAATTATT
CATCCAAGAAGACCAAAAGAAAGCATGGGTGCTGAATGAAGAACTGTATG
ACCAACTGCGACGTCAATTGCAAGAGCTCAAAGTGGAAATCTGCAAACAG
TGTAAAAAGAATTTCGAACTCGAAAAAGAAGTTAAATTTTTCGATCAAAG
AATCGCACTTTTGATCAACCATAAAATAAGTGTAGAGgaaTTTCCAGACA
ATATTTCATATGGAGAACACAGACTCGATACATTGAAAGATGATATTCAA
AAACAGTGTTTTGGAAACTTGTTCTTCTTGCTGCAAACGGAACCAAAATA
CATCGCTAAATTGACGCGTAGTGTGGACACGACAGAAATTGATGAATTGT
TACAAATCGTCATGTTTTCTTTGTATGGCAACCAATACGGTGAACGAGAA
GAACACTTGCTCCTCAAAATGTTCGAGTTGGCATTGAACATGGAATTCGA
CGAGACTGATGAATTCGGAAGCTTGATGAGACAAAATACAGCAATCTCAA
GGATGATGACCACTTATACAAGACGTGGGCCTGGACAAGAGTATTTAAAA
GACACACTACAGGAACTTGTGGAGCAAACGAACTTAACTGGTCTCAGTGA
AGATCTCAATCTTGAAGTGAACCCGGTGAAGGTCTATTGCGCTCTACACA
GTGTCGTCGATGACGAGAGGAATAACGTCACAATGGAGAAAGCATTGAAA
GACAAAGATGTTAAGGCCACCATCAACGCTCGCCTAGTCAAACTGGAAAA
TATCACCAAATATTTCTTCGATGCTATTATCCAATCGTTGAACAGTGTAC
CTTATGGCATTCGGTGGTTGTGCAAAGCTATCTACCAACTCTGCCAGGAG
AAATTTCCTCACGtttcaattgaaaatattaCAGGGCTGATTGGCGGGTT
CTTCTTACTACGTTTCATCAATCCCGCGATTGTTTTCCCGCATAATTACA
TGCTTCTGAATTCTCAACCTCGATCACAAATGCGAAGAAACTTTGTGTTG
ATCGCAAAACTCTTACAAGCTATCAGCAACAAAGGAGCTTCACAAATTCT
GAAAGAAGTCTACATGAAACCTTTGGAAGCTTTTGTTGAATCGAGACAAC
AAATTTTGCAAGATTTTCTCATGAAGTTGTGCAATGTGGACGACTTCCAT
TCCAACCTCGAGATGGAGCAGTATCTATCACTACCGAAAGATATGAACAT
TCGAATCACGTTAAAAGAAATGTATCGCCTCCACGATCTCCTCTGCAAAT
ACCAAGATTTCCTGACGGTCGAAGATAACGAAAAATTGACTGTTTTGCTT
CTCGAACTTGGTGATCCAAGCGCCAAATATCGTGACCAACAGGTTGAGAA
TGTGAGCGTTGACATCAATTTGTTGAGCCGTTGGGATGTCTCTTCCAACC
TCAAGAATGACATGATCAACGATTATGAACGCACTTCCGAACGTGGTATC
AAAGCTTTAAGGAAACGttgtcaaaatttattgacaaggCTACTGACTAC
GGCTCCATACTTAATGCAAGAATTGACGTTGAAAAATGTCTTTGCGCATG
CGTACAAGACAGGTGATGACGAGATCGAACGTATTACGCAACTCGTGAAA
TCACATCTCGATTCGCTCAAAGAATCTGACCCCAACTACAAAGAAGAAGA
ATTTTACGTGCACGTCAAAGATAGTGTTTCGAAACAAGAAATCCATTATG
ATAAAATGAGCAAAGAACTGAAAAGTTTGAAGAACGTTCAAGAGaCACTC
ATCTGGCACGGAGAGTTCTTGAGTCAACAGCTAGACGCATACAAAGAATA
TTTACAGGATGCAAGAAATAAGGCAGCTGTCAGAGAAGGCAGAGCATCTC
CAggaaaaatgaccaaacaaaatTCAGGACCATACAAATTCTCATACACT
GCTCTTGAAAAAGAGGGAGTCATCTTTGAATGCAAATCCATTAGNCTTAT
TCTTCGATTTATAGGAGGGCAGAGCATCTCCAggaaaaatgaccaaacaa
aatTCAGGACCATACAAATTCTCATACACTGCTCTTGAAAAAGAGGGCGT
CATCTTTGAATGCAAATCCATTAGCTATAAGAAAAaacaaaatattgcat
ttacAGTCTTCTGTAAGGAACCTGGAATCTACACTATTCAATTGCATTAT
AAAATACCTCTTCCTGGCCAACAGACCCTAATGGAGTTAGATTTGCACCT
GGAAGATTTGTTGAACCTCCAACATTTTGATGACCCTGTTTACAACATCA
ATGAATACGTTGTACTGGATGTCCGACGCACCTTATCTTTCCTGCATAAA
TATTTCGGGCCCAAGAAATTATGACTAACCGCCGGGGGATTCAACACACA
GCTTAGAACTTTACGACGGTCATTCCGTTCCAAAAGTCACCGCGATTCTG
TCGGTTGATGGGACGGGAAATGGTAGCCGAGCTGTGTTGTTGGATATTGT
TGAATCCTTGGAAGAGGATTATGGGATATCATTATTTGGTGAAATACCCC
CAGAATGCACTACGATCTCGCATAATGGTCACAATGTGATTAAAGAAGAA
CTTTCACCTAGGCACCAAAGAATTCGATTCAAACTGATTCAAATGGTTTC
AGGCTAGCCTCTGGTAGGTTGAGCTATATGGGCTTTGCGTCAAACGTGGC
TTTAATTTTGTGGGTCACTTGCCGCTATTGAAGGGGAGGGTTTCTATAAG
AAATCGTGCAACCCTTTTTTATTTATGCTGAACATTATTATGGACCAAAT
GAGCAGCTTGAGGACGCGTCGCAGACGAGGTCCATAAACGGGTGCCTTTA
TGTTGGTATTTCTGATGTTTTGTTCTGATGAAATATTTCATAGCATTAGA
TTATAATGGCCATTTTATATGCTATTAATTAGAGTTATTATACAGTAATA
AATATCATTCGAAATTACTCCTGGACCTTATTATAGATTTTATTTATCTT
ATGTTTACTACGTTTCAAAGTTTattaagaaatttgtttttgtagGGTCA
AAATTTCCGCCTCTTAGTTTTGTACAAAGGAAGCCTgcattttttagaat
tttattaTTATGAGAATTAGCGTAGGATTCAAaaatacccccttctcaca
gacccggtgagattttttcagccagtgggggcaAAAATAGCGGaccaaaa
ctcaatggggattgatattttgCTCATGACTGGCGATttgaattcctttg
tttttgagcaaGAAAATTCAGTGTGGAGGGAAAGAATAGCACAATAATTT
Gcaatgaggattggtttatctgattattttcagcggggacgatattttgg
tcaatttttccagtggggctgtgagaagggggtattcAAAAGAGTTTACA
TTGTTTACTAAACAATGCTACACAACTATTCACTATAATTTCGAAGAGAA
ATCGAGATGATTTCTAGTCTAGCAATgtatttcttacattttttgccCTT
AAAAAGAGCAGTCTCTCATCGATGTTATCGATTAATTCTAACGACTCTGA
TAGACCTTGATACCTCACCCAGGGtaaatttttattctttataaTATACA
TACATAGCAaagtatatttttgtttttctatacttctcttataaataaga
acaattttttatgaaattatttCTTCATACATCAtacgattttgattttt
cgtcTTTTGATATCTGtttctaatttcaagttttcttcgTTTCTGCACTA
ATCGAGAAAAGGACTTACATGCTGGTAAAGTTGGCTTTCCCTTATTCAAA
TTCGAACATTTaactctccctaattcgaactcgaacaaATCTTCCAAGTG
CAAATCtactgaaattttattgaactGTCATCTCTTTTCTTCTCCCTCTG
AAAAcgtggatttttttttaatatacagTAGCATTTTTTTCTGCAGTGAC
GAAAATTTTACGGATTTATCACTGTCATTGTAAATACGATACGACAAGTT
GTTCATATTATtattaaaacatatttttttcatgtccctttttcatagtt
ttagtttttgtttgatcagaaatatttttaatgaaatttagtaaat
Run BLAST on NCBI

transcript from alignment at scaffold_167:1113414..1127243+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049937 ID=TCONS_00049937|Name=TCONS_00049937|organism=Clytia hemisphaerica|type=transcript|length=13830bp|location=Sequence derived from alignment at scaffold_167:1113414..1127243+ (Clytia hemisphaerica)
AAAAGACTCGAGCCATATCTCACTGTGAATTTATCTTTCAGAGAATAAAT
AAACCaatatcaaaaaaaaacaaatcaaaacaaatacatCAGAAGACAAG
CACCTAATCGCATCTTAAATTGTTTATTAATGCCTGTCTTTGCATTCGAA
TCAGCCATGGCGTGCTTATCAGCCGAAATTACTGCCAACAATCAATTATT
CATCCAAGAAGACCAAAAGAAAGCATGGGTGCTGAATGAAGAACTGTATG
ACCAACGTAAGTATTACACTTTGTCTTCACAGGCTATTTCTAACCTTTTT
CATGGAACTAATTATCATCAGGTCATTTCATCGAACCGTGTTTTTGGCAA
GGTTTTCGCTTTATATACCCACACTTTTAACtgtattttttctatttctg
tTATACGAAAAGCCTAGAGTAATGAAGTCAATGTAGTCTCCTCAAACCTG
CTATATTCGAAAGTAGATAAAGGTTTTTGGTAGAAATTAGACTATTAACG
TAAAGGCTATAGTGATGTGTAGTTTAGTTGTTGCTCTCTCAGTGTCTTTA
CTTTTCTTCACTATACTCCACTTGTTGTAGGGTACTTGTTGTCTTTTTCA
TCACACTTGAACACAGACCGTCTCTCGTACGTCATAAATACCGTACTGTA
TCCTCATTAATACACCACAACTGATTTTCCTTATCTCAATGGCAAGCTGG
CAGAGAGGACTCTCCTTtaattctttcttctttttatctCAAACGTGAAC
TGATTTTTCTTGCTTCATTTTCGTGTTGTAACAAACCAACCGTGAATTCA
AGAAGTATGACATAGTTTAGAGGGCACATTTTCCCTTTTTCTTTCCACCT
AGTCTATTATCCATATGGTTATTTTAGCATGATTCAACTGCAGACGGAGA
GTATAAATTCGCTCAGTGTACTACGAAAAGTTAGTGAAGAGTAGCTAGCA
ATATAAAGACCTTGAAGAGCTGGACCAAGTTTCTTTGCGAATATTTATGG
TTCTATGATTGATTTTCAGTTACGGAATGGAAAAACCAATGAGTTGTAAG
TGTTTTGTCTAACGTTGGCTTCGAACTTTTGACAGTTTTAACTGCTTGAC
ATACACAAATCAATATCGATTCTAGCTAATTTTACTTACAATAAATCAAT
CATATCACGTAGGTCCGGCTTTTGTTTATTGGATAAAATGACCTTTAAAA
ACACAATTGCACATTCATCAATGACTTCACCCGGTTATTTTGAAGTGCTT
GACGGGGGATTGTACTTGAGTTTGACAGGAAGTCAACAGAGTGGCTCATC
TGAAAGCATGGCATGCTCTCTTGATTCATTATCAAGATTTTGAATACAAC
GGATTTCTACTCGACCGTCCCTCCCCCTTTTCCAAAATGACGTCTTAACA
TTCCAAgtcatattttttacttcagCTACTTAATTGATTCTACTATGTGT
ATTATATATATGGCATCGATGAAATTTATTTATAAGTAAAAGTTTTTCAG
AACATGTCTTCGTATATTTTGAGATTAGAAACCTCATGCCGATGCAGTGT
AAGACATTCTCTATATGTGTTATAAATGCTGAAGGATTTTTTTCAATACT
ATGTCTAGTCAATGTTAAATGTCGCCCTCCCGCTTTCCATTTTAATCCTT
ATTGCTCTAAATGCAGATCCATTACATCGGTCATTTGTATAAAGTTGatc
atttcaaaattaaaaaaagccttttgaTGATTACCTTTAAAAAGTCATAC
TGGTTTTTGTGAAGGTTTGAACCTCTATGTTGTGATTATGATATGAATCA
ATGATATCCTCAAttataaatatattttcttaatgcCACGCCCGAAGAAG
GCGGAGTTTCTaacagaattttatttttaggagATAAAAAATTCCAGCTA
TGTCTCATTCTTTGAAACATTAACATAGTTTTGTGTCAAATTCAAGATTA
TtagaaaattgctaaaaatgtGTTATTTTATCCATTTTATCTCATGCTTT
TACCATCCTCGTGGCAAGTGAATCATCgagaaattctattttttgtaatt
tcagaATAACTTGCTAACTGATTCCTAGACATACTAAATGGACCGTTCGT
TTCATTTTAGTACTTAACATTACATCATCGACAAGTGAATGTGTTCATCA
AGTCACAAAGCTCGAACTGATGGATACACAATTAATATTCATGAAACTTT
TAGCTGGTTGCCTGATTATATAATTTCACTATCTTCgttccaaaatagaa
aaaaaaacaaaaaaactcacaTGTAAAAAACCCGTGAAATGTTTTTTGCT
GACGACAGTTTTTTGACGGAAAAACAAGCATGAGCAAGCCTAGGTATCAA
TGTCAAACGACCTTCACACATATCAATCAACGCCATGAGACATTCGCCAA
AAACCAAACAAActtaaaaagaaatataaaaacaaaacgatTTATAAGAA
ATACTCAGAAAAGTTAAAATATGCTACGCTACTTATAGTATAGATTCACT
ATAGGCTCTACATCTTCCCACGGTCACCACCCCCGGGGACTGGGGATAGT
TTTACTGTATCCATTCAACATCGTTTTCATATTAAAGGGCTATGATACTA
GAGTACCGgaggatgtttttaacttttcttaAATCCTTATTCATACGTCC
CCTTACAGTTACAAAGCGATGCTAGAGGTATCCATAACCTAACACCTACT
TTAATTTCAACAATCACGCTATTCGTTTTGCTCTTTCGGTTTGTTTATAT
CGAGCAGAATTTGCATTAtgaacaaatctttgtttatgtgTAGATGCATA
AGTAAGGCAAAGTTTGTGGCTATAAGTAGATTTGACATATATCAATGAAT
CTTGTCTGGGTCCCGCTTGTAACTAAACTAGAAGGGTCTTAGACACAGAT
GCATTTGTATGGTTGAGTTTTTGGAATTTCTTTCTCACAGAGAAAAGTCT
ATTACGTCACAGAAGCTCATAACATTAGTCAATTTCTTAGGTTTTTCTGT
GGTGACTATCTGGATTGTGTCATGACTTGTTGCGATTGATTTTATTTTAC
GTTCGAATTCAATTTCAGTACTTAATGTCAGCAAACAAGAAATACAGATG
AAATAacagaaaaactgaaaattgtattttaattaAAATCTGTATCAAGG
AAAATATATTCAAGCAGGAACTTTTTAAATCGCGTATTATAAATTGGGAG
ATGGATTTCTCTATGATGTATCAACTATGTAAGATATTTGATATTAGCTA
TAATAATTTTGCAAGAGTCCCACAAGCTAGATCTTATAATAGAAAGTTAG
CCTTTTAAATTAGTACATTGAGAAATCTATTGCAGGGACCAAAATAAGAA
GTCCTTACCCCTAATTTCTTCACTTCTAAACCCGTTCCTTTCCTTTCACT
TCAGTGCGACGTCAATTGCAAGAGCTCAAAGTGGAAATCTGCAAACAGTG
TAAAAAGAATTTCGAACTCGAAAAAGAAGTTAAATTTTTCGATCAAAGAA
TCGCACTTTTGATCAACCATAAAATAAGTGTAGAGGTAAGGGTTACTttt
ctctttcattttcctttgcTTTTTACTGGTATTATATGATTCTTCCTCAG
TCAAAGTTAGCTTGATATTGACAGAACTTACCTGAAGATCAATCCGAAGA
GCGATCCCGCTAATAATCAAGAAAGTCTGCGACCATAGTCTGTACGGATG
GAATTCGAAGCTATATCGATCATTATCTACCCAATGGTAGGCAAGGGCGC
CACTTTGTCTCCCTTGATTGCTCCACTTGCCTCTAGTCCTTCTCTTTAAA
TACTGAGCATCAatcagagaggcatcaagtaccattttgtgaTCTTTGGT
ATGATCCGGCCAGGGAATGAacccaaagattctcaaaatggtacttaaat
gcctctctgcttgatgctcaacaattaagagaaagatcacgggtaagtgg
agaaatctagggagaaagagtggcgccttctcctaccttcgggtggatag
ctatcgaaagaggagcctttgggtcgcccCCGACTGCGGTCACAGACATA
CTTACAACTATTGAACCCAAGGCATGGCAACCtcagccggatgctctacc
tttacactacccagctgacacacaacgttgtttcgacgtttttctaacgt
tcacaacgtcaatataacgtcagatgaacgttgaaacaacgttgtgtgcc
agctgggtacggCTCACCGGCTACCTAAGATTGAGTTAAtcatctttctt
cttctttatttttcaggaaTTTCCAGACAATATTTCATATGGAGAACACA
GACTCGATACATTGAAAGATGATATTCAAAAACAGGTACTTGTCTTTCAA
TGTCACTCCTCTCGCAGCCGCCCAGGAGAATGGGCGCAAGTTAAGCAGGA
TCAAATTTCAAGAAGACATTTTGCATCAACGCGAATAAAATCGAATTGTC
TCTTTTTTGCAATGATCGATAAGTGTGCAAGCTGTTACCGTATTTGgtaa
acttgaaaaaattccgAATTTCAAATTACATGGTTTTGCTTTTCAAGAAA
TTTCTAATCAGTAATATAGTCCTCGACATTgcgtttaaaaatctttgtat
TTAGCTCTATTTCTTCTACTTTTCAGTGTTTTGGAAACTTGTTCTTCTTG
CTGCAAACGGAACCAAAATACATCGCTAAATTGACGCGTAGTGTGGACAC
GACAGAAATTGATGAATTGTTACAAATCGTCATGTTTTCTTTGTATGGCA
ACCAATACGGTGAACGAGAAGAACACTTGCTCCTCAAAATGTTCGAGGTA
AGCTACAATTTAGCCTGTACCAGCCCGAATGCCCACGgatgatttttgtt
ttttaaagtttttttaaaaaaaccttGCAGTTTGTCTGTGTCGTTTCGCG
AGTTTTCTTTCGCGAACAAGAGTTTGGTACAGACTAGCGAaaaataaggt
tcacagggTGATTTGAGCTCATTAGTGGTCTTCCAGCATATTACTTGCTT
TATGTAACGATACTGTTGGTTGAAGAACCTGACGAACTCAGAACCTAACT
AGTTTCCATAGACAGTGACAAGGAAGTCAAACTAGCATGCCAATGTCAAT
AGTAAAGGTATTGATCGTAAACAAGCAACTGCAGTAAAAGCGATTCCTAA
ATTGTACTGTAGTCTAAGAATCAGCGGGCTCACTATACATTGTCGAGGTA
AAATCACCTTTTTACATTTTAGTTTAGACTGAGGTTAAAAGctataataa
taaataatatcCATCTTTTCTCAGTTGGCATTGAACATGGAATTCGACGA
GACTGATGAATTCGGAAGCTTGATGAGACAAAATACAGCAATCTCAAGGA
TGATGACCACTTATACAAGGTACTTAGTAGACCTTCTTCTGTGAATGATC
TCCTTCAATCTCCGTAATAATACTGTCCAGCGTCTACATTTTATCCCAGT
CTAACAATCAAAGCTCTGAGCCTGCCTAAGAGACGACTACAATTGACATT
ATTCATTAATTATTGAAAGTCATCGTCAACAAGACACTTTCATAAACggc
gctctactattcgataagctcctttattcaatgaaaatacaattcgAATA
CAAATACAATATCGAATTATAAAGCGTCAAACTGTACTTTTTTTACGCAG
GATATAATATTCGTTATCGGACAAAAGATTACTCTTCTAGGCCCTTCTGA
ATGAGCTCTGGAAAGAATATGTTATTGTTATAATATTGTTATTCTGGTGT
TTCATTTGATATGATTTACTTTCTTTCTTGATTCTAGACGTGGGCCTGGA
CAAGAGTATTTAAAAGACACACTACAGGAACTTGTGGAGCAAACGAACTT
AACTGGTCTCAGTGAAGATCTCAATCTTGAAGTGAACCCGGTGAAGGTCT
ATTGCGCTCTACACAGTGTCGTCGATGACGAGAGGTCCGTTTACCATACT
TCATATTGGATACTGGTTGTTTATCTTGTTCTCATTGCATTATCTGATTT
ACAATATCGTACCTTTCAGTCATTGCGTTTAGGCAATGGTAGTAGATATA
TTCTTTGATAGCATGGCATTGATATTTTGTTAAACAAGGAACGACAGGCA
ATTCTTTACGGTTGAAGGGTTCTAAATGTCTGGTAACTGTCTGCTTTTGC
AGAAGATGATTTTTTGAacgtaattcaaaaaatatGGCGTCCATCAGTAT
CGTATATAAAACCTAGGATACACGGGGACGCGGTTGTACTAAACATTTTA
TATCACGTGATCATTTTTCAGGAATAACGTCACAATGGAGAAAGCATTGA
AAGACAAAGATGTTAAGGCCACCATCAACGCTCGCCTAGTCAAACTGGAA
AATATCACCAAATATTTCTTCGATGCTATTATCCAATCGTTGAACAGTGT
ACCTTATGGCATTCGGTGGTTGTGCAAAGCTATCTACCAACTCTGCCAGG
TATGTACTGATTAGTCTAATCACCGTGGTTGCGAAGAAAGGGGTGGGCAA
ATGGCTATTGATTGATATCTCTGTCGTCGTGTCAAGTCAATAGACTCGTC
TTGGAAAATATTGTTGCTTTTGGTCTCAAGTGTAATAattgttattcaaa
ataaagcaTTTCTCGGGCTAAGCTATCAATGGCATAATTATCAAgcttgt
tttttcttctttctttacaGGAGAAATTTCCTCACGtttcaattgaaaat
attaCAGGGCTGATTGGCGGGTTCTTCTTACTACGTTTCATCAATCCCGC
GATTGTTTTCCCGCATAGTGAGTATAATATCCCTCTTCTACTATCTATTT
ATATTGTTATCTCTTAGGACTGCTTAGGATTGCACTaatatataaatgaa
aatcttcaaaatcatcTCTCATTGAAGATGTCAGGCCTTCAAGCCCTTCA
TGcgtttttcatgcccttttagtGTCCGGTTATTGGCCACCAACACGgac
gctgccctgcctttctaaaatatggcctggaTGTTGTGTGTTCCTTGGTT
TACAATAGGTCTTAAACGATTTTTCTCCTAACTTTCTTTTCTAGATTACA
TGCTTCTGAATTCTCAACCTCGATCACAAATGCGAAGAAACTTTGTGTTG
ATCGCAAAACTCTTACAAGCTATCAGCAACAAAGGAGCTTCACAAATTCT
GAAAGAAGTCTACATGAAACCTTTGGAAGCTTTTGTTGAATCGAGACAAC
AAATTTTGCAAGATTTTCTCATGAAGTTGTGCAATGTGGACGACTTCCAT
TCCAACCTCGAGGTACccctttttcataagaaaatgtTGTATTTGTCTAC
AGTATAGGAATCCAAGAAAAGAAATAAGTTCAAGTAGCGATTTTTTACTC
CTGTGCTTCTCTTTGTCATTTGAAATCATGGATCTGCTATCAACCTAAAC
CCTTAGTCAACCGTAATGACGATTCTCCCTTCCTTTCAACAGATGGAGCA
GTATCTATCACTACCGAAAGATATGAACATTCGAATCACGTTAAAAGAAA
TGTATCGCCTCCACGATCTCCTCTGCAAATACCAAGATTTCCTGGTAAGT
TGCCCGATAAAATCTTTCCCGGTTATTTCACGACTTAGTGTCAATTTCGA
AACGTTAGCTTTTGACGTTTGCAGGTCTTTTGTTTGTAGGTCGGCTTTTG
TctcaaaacatcaaatttgcAATCAAACTAGAACAACTAGATAATATTTA
AGCGATTggcggagttttttgaaaattagaaaaaaagaaaaaagcagtTC
TAGGATCAAAAAGATAATTTTGCGCACAGTAAGTAACCCTATGTTTCCAC
GTTTTTCAGACGGTCGAAGATAACGAAAAATTGACTGTTTTGCTTCTCGA
ACTTGGTGATCCAAGCGCCAAATATCGTGACCAACAGGTTGAGAATGTGA
GCGTTGACATCAATTTGTTGAGCCGTTGGGATGTCTCTTCCAACCTCAAG
AATGACATGATCAACGATTATGAACGCACTTCCGAACGTGGTATCAAAGC
TTTAAGGAAACGttgtcaaaatttattgacaaggCTACTGACTACGGTAA
GGCAGTTTGAGTTTttataagacatttttttgcttttaaagtTTGTGTTA
ACATAATTTCGTTCCTGAATTGACCTTTCATCTTTCGTATTCATTTCGGT
CTGGCACTTATCTCCTAACGATTgtgtttgaaattgaaaatgaaagtttt
ttccgTGCTTTCAGTGCAAGAATTAGTTTCGAATTATGTTTTGCTTTGAT
TCCATGTATTTCACacgaaaaattatcaaataaaaaaaaggacGGAAATG
CCCTAtgaaatataaatcaaacatTATAGTCCAGATTTTTGTatacttga
tttttttcttatctCGAAACTCTTGTATTGAAACTTTTCGGTCATTCTCT
TTAGGCTCCATACTTAATGCAAGAATTGACGTTGAAAAATGTCTTTGCGC
ATGCGTACAAGACAGGTGATGACGAGATCGAACGTATTACGCAACTCGTG
AAATCACATCTCGATTCGCTCAAAGAATCTGACCCCAACTACAAAGAAGA
AGAATTTTACGTGCACGTCAAAGATGTAAGATTCGCTTTCATGAGATAAT
TAActactttcaacaaaattttgtgTAAGAGAAAGTTTATGAGTTTTCAC
GCGTCAACCGAATTTTCCGTATCAAATGATATAAttgactttctctaatt
cgatcatCAAGTGACcaaaaattttattcgaattagagaaagatttaaaT
TACAGGAGTAATTCAAACCACTTCAGCTTAGGGGACAAATATTTTAGTTG
TGTTTTAGTTGGATGTAATTGTTCTAGGAAGCTCTCAAGATATCGACGTT
GATAATCGTGAAATAGTTAAAGTATAGTGTGCCGACCATGTGGAAGCTGC
CTACACTTATTtcataaaacctcttttttgAAAGAACGCGTGCTTCTCAG
CTGTCCCATTGGCGCTTGAAAGATTAAATCCCGAATTTCCGATTAATAAA
GTATAATCCGTTATAAtcctatttgatttggttgatcCTGAGTTAAGCAA
TCTCTTAATTTCAAACACGCTATTTATAACTTTCGTGGCTGATTCTTACA
TTATGTCAtcaaaatgacgtaatctttctgTCGTTCTTAGTTAGTTTTGT
GCCCGTCTACTCCGACTCCAATTATTgcagataccttatcggggaaaatt
ttcgtcacttgctggtagttggtaaacgcattaaggccggagaaaatttt
cgtcggggaaaaatattcgtcacttggccaaaatttcgtcacttttcccc
gacgaagttttccccgataaggtatccgAATCTAGTGAGCTCTGGGTAGT
TTTAACTTTCTccagtctctttaactcgaacctctttaactctgatgtct
ccttaactcgaacaagttttatggtcccttcagttagcattgccttataa
accttactccataactcaaaacTTCCTTAACGTGGACAGTGTTCCCCgta
cgtgttcgagttatggagaatcTACTATATCATTCAAAGCGCTAGCTATG
AAATAAAGACCCTTTGATAATAAAGTATTTGTATTATCTTTTAGAGTGTT
TCGAAACAAGAAATCCATTATGATAAAATGAGCAAAGAACTGAAAAGTTT
GAAGAACGTTCAAGAGGTTGGTAAttgattgattgattgattgattgatt
gattgattgattgattgattgattgattgatcattttcattGGATATTGA
TTGGTCTATTGTGTATTGAAACTTAattatatctttcttttttagaCACT
CATCTGGCACGGAGAGTTCTTGAGTCAACAGCTAGACGCATACAAAGGTT
AGACCTTTAAACTCTTCAAAAACTCTTCAAAGATCATGATATAGGTGAAA
TGAAATCAGTGTGTCGGGAAACGTTTTTCTTTGTGGGGTCCCAACAAGCA
CACGGCTATAATGAAATCTAAGCCAATTAGACAATAGTAGGCGCCCAAGT
AATTCCATCCCAGGTTAATTAGCCATAAAAAGAAGAAGTGATTTCTATTC
AGTTTCAATTATAACCCATCGTTTAAGTTAATTAAGTAATCATATAGGAC
GTCCTGCTGCGAATTCGATTAAACCATTTTGATGTGATTGTGCGCGTCCG
tcttttctataagaatattagaGATAACCCCTTTTGAACCATATGAAGGC
TAGCTTGACTTTgactttcattttgtttttgtcttttagAATATTTACAG
GATGCAAGAAATAAGGCAGCTGTCAGAGTaagtttgcttttaacatttCC
CCCCCAAAGCTCTCTAAAGCAAGGAGATTTCAAAACATTCCATATTCAAA
GTCTGTATAggaaactttttcatgaaaagtaAGGAACAAACTTTGCctga
taatttttatttttacctaCCTGCCTGCTTTTTAGAACCTCCATTGGTGC
ACAATTTTAATTCTTCTCTACGCTAAAAGTGTCCGATGGAAACTGTTTAC
GTTGGGAACATATTAAGAAGGAATGTTATTCTTCGATTTATAGGAAGGCA
GAGCATCTCCAggaaaaatgaccaaacaaaatTCAGGACCATACAAATTC
TCATACACTGCTCTTGAAAAAGAGGGAGTCATCTTTGAATGCAAATCCAT
TAGNCTTATTCTTCGATTTATAGGAGGGCAGAGCATCTCCAggaaaaatg
accaaacaaaatTCAGGACCATACAAATTCTCATACACTGCTCTTGAAAA
AGAGGGCGTCATCTTTGAATGCAAATCCATTAGCTATAAGAAGTAAGTGT
TTATACCAATAGACCTGGGGCAAGGAGGATTAGTCTCTTGAACAGCTGGG
GTTTACATTGTGAGCGCAccctgaaagaaaaattttaaaatttaccaACT
TGAGATATTTGATTTATGTCAAGATTAATTGTGTATGGTTGATATGACCA
AATACTTATCTTCATTCTTTCTTTCCTTCCAGAAaacaaaatattgcatt
tacAGTCTTCTGTAAGGAACCTGGAATCTACACTATTCAATTGCATTATA
AAAGTGAGTAATGTAGCATATTGTTAaacgttttgttttgttttgcatTT
TCGCTacacaaagaattttttttttttaaagattcgaaTTTTTCATTACa
cagttttctttttctttttcccacAGTACCTCTTCCTGGCCAACAGACCC
TAATGGAGTTAGATTTGCACCTGGAAGATTTGTTGAACCTCCAACATTTT
GATGACCCTGTAAGTAAcatttgtttccaactttcccGCCTGTTAAATTA
GATATATAGATACCTCAGAGCTTCAAATAGCGATTGGATACCGGACATTT
TCAGACTCAAATTGCTCCCTTTCCGACTTAAAAATCATAATTATCTAGCC
AAAGCAACCCTGATTGGACATTTTGTCtgacccacttgaaatcgttattt
cgagccatGAACCTTTTATTTTCATAACGGCTATTTCACCTTGCATTGCC
AACAAATAGTGGTTAAAAGTACTTAATGTGGTTAAAGAATAACGTCCTTT
AGCGGAAATAAGCTGTAAACATATTAGCCtaatttgaaattgatttattt
GGATCTAACAAATACATTATTCACTGGCCGCGCGTTTTCAAAGGCGGCCG
CCGACTTTCCGTTTCCGCCGCGAGGTCAAACCTTTGAAATgacttgttta
tttttattgccTTCATAATGTTACCGTTGTACTATTCGCCCATTTTTGAA
ATACCTGTAATTCCTTTGAAACTCTTGATATGTATGGTGTAAAGAATAAT
GTAATCATGATTCTACTCGAATTTCACTGTGATGGAATCAAAGCTTAATC
TCTGTCGCCATCGATGAAGATGAgatactttcaaaattttagcttttctt
ttctttttgctgATATTACCAACATTAATCATCACGATTTAAAGTCTATC
TGAAGCCTCTCAAAATCACTTTAGGTTATTCTAATGAATAATAATGACAT
TCTAACCACTTTCTCTTACAGGTTTACAACATCAATGAATACGTTGTACT
GGATGTCCGACGCACCTTATCTTTCCTGCATAAATATTTCGGGCCCAAGA
AATTATGACTAACCGCCGGGGGATTCAACACACAGCTTAGAACTTTACGA
CGGTCATTCCGTTCCAAAAGTCACCGCGATTCTGTCGGTTGATGGGACGG
GAAATGGTAGCCGAGCTGTGTTGTTGGATATTGTTGAATCCTTGGAAGAG
GATTATGGGATATCATTATTTGGTGAAATACCCCCAGAATGCACTACGAT
CTCGCATAATGGTCACAATGTGATTAAAGAAGAACTTTCACCTAGGCACC
AAAGAATTCGATTCAAACTGATTCAAATGGTTTCAGGCTAGCCTCTGGTA
GGTTGAGCTATATGGGCTTTGCGTCAAACGTGGCTTTAATTTTGTGGGTC
ACTTGCCGCTATTGAAGGGGAGGGTTTCTATAAGAAATCGTGCAACCCTT
TTTTATTTATGCTGAACATTATTATGGACCAAATGAGCAGCTTGAGGACG
CGTCGCAGACGAGGTCCATAAACGGGTGCCTTTATGTTGGTATTTCTGAT
GTTTTGTTCTGATGAAATATTTCATAGCATTAGATTATAATGGCCATTTT
ATATGCTATTAATTAGAGTTATTATACAGTAATAAATATCATTCGAAATT
ACTCCTGGACCTTATTATAGATTTTATTTATCTTATGTTTACTACGTTTC
AAAGTTTattaagaaatttgtttttgtagGGTCAAAATTTCCGCCTCTTA
GTTTTGTACAAAGGAAGCCTgcattttttagaattttattaTTATGAGAA
TTAGCGTAGGATTCAAaaatacccccttctcacagacccggtgagatttt
ttcagccagtgggggcaAAAATAGCGGaccaaaactcaatggggattgat
attttgCTCATGACTGGCGATttgaattcctttgtttttgagcaaGAAAA
TTCAGTGTGGAGGGAAAGAATAGCACAATAATTTGcaatgaggattggtt
tatctgattattttcagcggggacgatattttggtcaatttttccagtgg
ggctgtgagaagggggtattcAAAAGAGTTTACATTGTTTACTAAACAAT
GCTACACAACTATTCACTATAATTTCGAAGAGAAATCGAGATGATTTCTA
GTCTAGCAATgtatttcttacattttttgccCTTAAAAAGAGCAGTCTCT
CATCGATGTTATCGATTAATTCTAACGACTCTGATAGACCTTGATACCTC
ACCCAGGGtaaatttttattctttataaTATACATACATAGCAaagtata
tttttgtttttctatacttctcttataaataagaacaattttttatgaaa
ttatttCTTCATACATCAtacgattttgatttttcgtcTTTTGATATCTG
tttctaatttcaagttttcttcgTTTCTGCACTAATCGAGAAAAGGACTT
ACATGCTGGTAAAGTTGGCTTTCCCTTATTCAAATTCGAACATTTaactc
tccctaattcgaactcgaacaaATCTTCCAAGTGCAAATCtactgaaatt
ttattgaactGTCATCTCTTTTCTTCTCCCTCTGAAAAcgtggatttttt
tttaatatacagTAGCATTTTTTTCTGCAGTGACGAAAATTTTACGGATT
TATCACTGTCATTGTAAATACGATACGACAAGTTGTTCATATTATtatta
aaacatatttttttcatgtccctttttcatagttttagtttttgtttgat
cagaaatatttttaatgaaatttagtaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031651XLOC_031651Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049937-exon-scaffold_167-1491911889:1113414..1113669TCONS_00049937-exon-scaffold_167-1491911889:1113414..1113669Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1113414..1113669TCONS_00049937-exon-scaffold_167-1510915933:1113414..1113669Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1113414..1113669TCONS_00049937-exon-scaffold_167-1575043694:1113414..1113669Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1116818..1116948TCONS_00049937-exon-scaffold_167-1491911889:1116818..1116948Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1116818..1116948TCONS_00049937-exon-scaffold_167-1510915933:1116818..1116948Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1116818..1116948TCONS_00049937-exon-scaffold_167-1575043694:1116818..1116948Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1117680..1117748TCONS_00049937-exon-scaffold_167-1491911889:1117680..1117748Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1117680..1117748TCONS_00049937-exon-scaffold_167-1510915933:1117680..1117748Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1117680..1117748TCONS_00049937-exon-scaffold_167-1575043694:1117680..1117748Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1118040..1118210TCONS_00049937-exon-scaffold_167-1491911889:1118040..1118210Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1118040..1118210TCONS_00049937-exon-scaffold_167-1510915933:1118040..1118210Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1118040..1118210TCONS_00049937-exon-scaffold_167-1575043694:1118040..1118210Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1118688..1118782TCONS_00049937-exon-scaffold_167-1491911889:1118688..1118782Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1118688..1118782TCONS_00049937-exon-scaffold_167-1510915933:1118688..1118782Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1118688..1118782TCONS_00049937-exon-scaffold_167-1575043694:1118688..1118782Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1119201..1119347TCONS_00049937-exon-scaffold_167-1491911889:1119201..1119347Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1119201..1119347TCONS_00049937-exon-scaffold_167-1510915933:1119201..1119347Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1119201..1119347TCONS_00049937-exon-scaffold_167-1575043694:1119201..1119347Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1119685..1119862TCONS_00049937-exon-scaffold_167-1491911889:1119685..1119862Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1119685..1119862TCONS_00049937-exon-scaffold_167-1510915933:1119685..1119862Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1119685..1119862TCONS_00049937-exon-scaffold_167-1575043694:1119685..1119862Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1120084..1120180TCONS_00049937-exon-scaffold_167-1491911889:1120084..1120180Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1120084..1120180TCONS_00049937-exon-scaffold_167-1510915933:1120084..1120180Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1120084..1120180TCONS_00049937-exon-scaffold_167-1575043694:1120084..1120180Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1120458..1120675TCONS_00049937-exon-scaffold_167-1491911889:1120458..1120675Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1120458..1120675TCONS_00049937-exon-scaffold_167-1510915933:1120458..1120675Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1120458..1120675TCONS_00049937-exon-scaffold_167-1575043694:1120458..1120675Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1120856..1120957TCONS_00049937-exon-scaffold_167-1491911889:1120856..1120957Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1120856..1120957TCONS_00049937-exon-scaffold_167-1510915933:1120856..1120957Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1120856..1120957TCONS_00049937-exon-scaffold_167-1575043694:1120856..1120957Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1121223..1121459TCONS_00049937-exon-scaffold_167-1491911889:1121223..1121459Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1121223..1121459TCONS_00049937-exon-scaffold_167-1510915933:1121223..1121459Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1121223..1121459TCONS_00049937-exon-scaffold_167-1575043694:1121223..1121459Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1121818..1121988TCONS_00049937-exon-scaffold_167-1491911889:1121818..1121988Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1121818..1121988TCONS_00049937-exon-scaffold_167-1510915933:1121818..1121988Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1121818..1121988TCONS_00049937-exon-scaffold_167-1575043694:1121818..1121988Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1123008..1123079TCONS_00049937-exon-scaffold_167-1491911889:1123008..1123079Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1123008..1123079TCONS_00049937-exon-scaffold_167-1510915933:1123008..1123079Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1123008..1123079TCONS_00049937-exon-scaffold_167-1575043694:1123008..1123079Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1123209..1123260TCONS_00049937-exon-scaffold_167-1491911889:1123209..1123260Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1123209..1123260TCONS_00049937-exon-scaffold_167-1510915933:1123209..1123260Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1123209..1123260TCONS_00049937-exon-scaffold_167-1575043694:1123209..1123260Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1123653..1123690TCONS_00049937-exon-scaffold_167-1491911889:1123653..1123690Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1123653..1123690TCONS_00049937-exon-scaffold_167-1510915933:1123653..1123690Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1123653..1123690TCONS_00049937-exon-scaffold_167-1575043694:1123653..1123690Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1123957..1124205TCONS_00049937-exon-scaffold_167-1491911889:1123957..1124205Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1123957..1124205TCONS_00049937-exon-scaffold_167-1510915933:1123957..1124205Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1123957..1124205TCONS_00049937-exon-scaffold_167-1575043694:1123957..1124205Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1124396..1124466TCONS_00049937-exon-scaffold_167-1491911889:1124396..1124466Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1124396..1124466TCONS_00049937-exon-scaffold_167-1510915933:1124396..1124466Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1124396..1124466TCONS_00049937-exon-scaffold_167-1575043694:1124396..1124466Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1124590..1124672TCONS_00049937-exon-scaffold_167-1491911889:1124590..1124672Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1124590..1124672TCONS_00049937-exon-scaffold_167-1510915933:1124590..1124672Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1124590..1124672TCONS_00049937-exon-scaffold_167-1575043694:1124590..1124672Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1491911889:1125435..1127243TCONS_00049937-exon-scaffold_167-1491911889:1125435..1127243Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1510915933:1125435..1127243TCONS_00049937-exon-scaffold_167-1510915933:1125435..1127243Clytia hemisphaericaexon
TCONS_00049937-exon-scaffold_167-1575043694:1125435..1127243TCONS_00049937-exon-scaffold_167-1575043694:1125435..1127243Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1113414..1127243 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.05567	3.72577	9.75246	14.1172	3.86027	3.47164	6.76977	8.72053	6.68597	8.87324	7.14006	5.70622	21.6452	14.3988	28.2968	32.9214	22.0669	37.6403	23.3151	32.6009	26.6712	28.7938	19.7455	20.0692	8.46922	9.13641	170.802	178.922	131.973	143.717
Blast
[Close]
BLAST of TCONS_00049937 vs. Swiss-Prot (Human)
Match: IQGA1 (Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens GN=IQGAP1 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.362e-45
Identity = 174/707 (24.61%), Postives = 323/707 (45.69%), Query Frame = 1 
Query:  268 LQELKVEICKQCKKNFELEKEVKFFDQRIALLINHKISVEEFPDNISYG--------EHRLDTLKDDIQK--------------QCFGNLFFLLQTEPKYIAKLTRSVDTTEIDELLQIVMFSLYGNQYGEREEHLLLKMFELALNMEF-DETDEFGSLMRQNTAISRMMTTYTRRGPGQEYLKDTLQELVEQTNLTGLSED--LNLEVNPVKVYCALHSVVDDERN-------NVTMEKALKDKDVKATINARLVKLENITKYFFDAIIQSLNSVPYGIRWLCKAIYQLCQEKFPHVSIENITGLIGGFFLLRFINPAIVFPHNYMLLNSQPRSQM----RRNFVLIAKLLQ-AISNKGASQILKEVYMKPLEAFVESRQQILQDFLMKLCNVDDFHSNLEMEQY---LSLPKDMNIRITLKEMYRLHDLLCKYQDFLTVEDNEKLTVLLLEL----------GDPSAKYRDQQVENVS---VDINLLSRWDVSS--NLKNDMINDYERTSERGIKALRKRCQNLLTRLLTTAPYLMQEL----TLKNVFAHAYKTGD-----------------DEIERITQLVKSHLDSLKESDPNYKEEEFYVHVKDSVSKQEIHYDKMSKELKSLKNVQETLIWHGEFLSQQLDAYKEYLQDARNKAAVREGRAS--PGKMTKQNSGPYKFSYTA--LEKEGVIFECKSIXL 2148
            L +++ E+    + N +LE ++   D +I LL+ +KI+++   D +S+         E   D +  + QK              + + +LF+LLQT P Y+AKL   +   +  + +  V+F+LY     +REE+LLL++F+ AL  E   + D+   ++  N  + +M+ ++ R   GQ  L+  L  +V++     + +D  LN++ +PV +Y +  + ++ +         +VT E+AL  ++VK  +++ +  +  +T  F  AI+ S++ +PYG+R++ K +     EKFP    + +  +IG     R++NPAIV P  + +++     Q+    RRN   IAK+LQ A SNK    +    ++  +  ++    Q  + F    C+V +      +++Y   ++L K + I I++ E+   H LL  +QD +  E N+ +  LL +L          G+ S    D   E ++   V + L +++DV    N + D       T    +  +R +    LT +L T     QE      ++       KT D                 ++ E+I   +K  L  L   DP  K +E    +   +  Q  +  +   EL  L+     L     F  +Q+D YK Y++   +  A + G+ S  P +M  + S      YTA  L ++GV+ E + + +
Sbjct:  889 LMKMREEVITLIRSNQQLENDLNLMDIKIGLLVKNKITLQ---DVVSHSKKLTKKNKEQLSDMMMINKQKGGLKALSKEKREKLEAYQHLFYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTLYNYASNQREEYLLLRLFKTALQEEIKSKVDQIQEIVTGNPTVIKMVVSFNRGARGQNALRQILAPVVKE-----IMDDKSLNIKTDPVDIYKSWVNQMESQTGEASKLPYDVTPEQALAHEEVKTRLDSSIRNMRAVTDKFLSAIVSSVDKIPYGMRFIAKVLKDSLHEKFPDAGEDELLKIIGNLLYYRYMNPAIVAPDAFDIIDLSAGGQLTTDQRRNLGSIAKMLQHAASNKMF--LGDNAHLSIINEYLSQSYQKFRRFFQTACDVPELQDKFNVDEYSDLVTLTKPV-IYISIGEIINTHTLLLDHQDAIAPEHNDPIHELLDDLGEVPTIESLIGESSGNLNDPNKEALAKTEVSLTLTNKFDVPGDENAEMDARTILLNTKRLIVDVIRFQPGETLTEILETPATSEQEAEHQRAMQRRAIRDAKTPDKMKKSKSVKEDSNLTLQEKKEKIQTGLKK-LTELGTVDPKNKYQELINDIARDIRNQRRYRQRRKAELVKLQQTYAALNSKATFYGEQVDYYKSYIKTCLDNLASK-GKVSKKPREMKGKKSKKISLKYTAARLHEKGVLLEIEDLQV 1582
The following BLAST results are available for this feature:
BLAST of TCONS_00049937 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IQGA12.362e-4524.61Ras GTPase-activating-like protein IQGAP1 OS=Homo ... [more]
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