TCONS_00050081 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050081
Unique NameTCONS_00050081
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050081 ID=TCONS_00050081|Name=TCONS_00050081|organism=Clytia hemisphaerica|type=transcript|length=2559bp
AAACTAATCAGCTAATCACACATTTGAAAGAAGTAAAATAATGCAGAAAT
CAAAGATATCAAATTCGAAAAACTTGACATAAAATGGGTTGTGGCTCCTC
AAAAGTTGCTGTTAGTACAGTACTCGTAAATGGCACACAGGACGGCGCCA
TACTTAAAGATGCTAACGGAAATATCACACAATCAAAACCTATTGGTTCT
AATGAAAAAGAGAGACTTGGCTCTCAGCTAGGATCAAGTAATCGATTAGG
TCCTGTTGAAAGTCTTGGTATTTTTCGAAAACGCAAGAAGAATTTGTATC
AATCTCTGGATGTCTTTGAACAAATCGATCAACGTTCTGTCACGGTGCCA
TCTACTGTTTCAAGGACTGCTCAATCTTTAGTTCAATATTTGACTGAACC
TTACGAAGCACCCCTATTCAAACTACGTGCAATCTGGATATGGGTCACTC
ATAATATCTCCTATGAcgtcaattcttttttcaatccaagtgaaaagaaa
agctcCCAGCTAGATGCATCGGACGTGCTATCAAGCGGAAAAGCTATTTG
CTCAGGTTATGCTAATCTGATAAATGTTTTAGCAGAatcagcTGGAATTA
AAACTGAGCGCGTGGATGGTTGGTCTAAAGGCTACAATTATCAATATGGT
CAAAAGTTTGGAGACATGAGTCCGAATCATGCATGGAATGTCGTAAAACT
GAACAATGATTGGTGGCTGCTAGATTCAACATGGGGCGCTGGCTACGTAG
ACAAAGAGAAGAATTTCGTACGACAGTATAGTGAACATTATTTTCTAACG
GATCCTAAACAATTCATTTTCGATCATTGTCCGACAGACATGCATTGGCA
ACTATTGGAAGAAATGATCGCCGTTGAACGGTTCGAAAATTACGCTCGAG
TTACGAAACATTTCTTTCGCctcaaaatgaaattattttcacatcaaaac
gGAATTGTTGTATGCGAAACTGGCCGTTTACATCTTAAGTTCCGTATTGA
TAAAGATATTCCGATAAAATGTACCGGAAAATTATCGGAAGTTGACGGAG
ATGTGGATACGGATCAATACATTCATGTTTATTCGACAGAAAAGACGCTT
CACGTTTTAGTCGATGTTCCTCGCGTTGgacaatttgatttgaaaatatt
cgCACGAGAACTGAACTCAGAGCAGAGCAATTTGAATTTAGTATGCAGGT
ATGCGATCACGTGTACTAATAAATTGGGACCGAGCTCAAGTTTTCCTAGA
CAATTCAAAAGATGGAGTCCAGGCTTTTATTTACATTCTCCAACTGATGG
TGTTTTGTATAACGGTGAAACGTACAAGTTCCGAATTAGTTTACCGAATG
TTACGGAAATGGCAGTTTGTTTGGGTGGAAAGAATTCTACATGGGAACGC
ATTCCAAACAGTCGAGGTGCATTATGGGAAGGTGAAATCACGCTTCCTGA
TTGGGTGGAACGAGTGAACGTGGTGGCacgttttgaagaaaaaactcCTT
TCTCCAGTCTTTTGGAATACAAAGTCGCTGAAAAGGATTGGGCaattgaa
aattgtgaaaatgaaCATTCATAATATTCGTGATATTCATttcgtaatgt
tttctacggaatcACACCggcaatttttaaacaatttttctcCAGATTGA
ATTTACCACTACTGGAAAAAACCGAGGTGTTACCGtagaaaatattacgt
catgaatacatccccttctcacagacccggtagcattttttaagccagtg
gggataaaaataacggactaaaactcgatggggattgatattcccatatt
ttttatggctgaggatttcaattcttttgtttttaagtcagaaaattcag
tgggaatgggaaaaatagtaaatattttgcagtgaggattgtttTTTTAA
TCCTTTTCGGtgaggacaaaaattggaggataattttccaccgggggcga
tattttggccaatttttccagtgggaaggggtcccagtgggtcaaTGAGG
AAGGGGTGTATGAATATAATGAATCATACAAATTACgaattttgagatgt
tttttttatcattcgTTAATAAGGAAGTCTCTTATATTTGTTAACAAGGA
AAGCTACCCCAAGGAACCGATCTCCACGCAAATTTCTATATTTGAATATA
CTTTAATCTGCAAAATATTCCGGCAAAATTTGCCCCGAGGATGTCTCAGA
AGAAAACCGAAGATCAGCTTTTTCTATAATTTATGATTTTCAGCAGTCTA
TAAATAATTTCATTTACAGCATTTATACATAAAAATAATgtgaaaatctt
tctaaaactAAGTTGATACATTATTGATTTTTATTGGTCTGGTTATGCAT
CAGTATACTGAagtgattttatatttttaaatagtttaaagtttgtttta
aatattaattggttttaaatttttgattgttgtgctattttttttttaaa
ttcaaacaaTGTAAATAGTTAATTTAGATGCtatttttatacatcaaaag
atCAAAGCATAATTGGGAAAGCGAAAACTCAAACTGGTATGATTAATcca
aaaaatatc
Run BLAST on NCBI

transcript from alignment at scaffold_167:947391..957644-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050081 ID=TCONS_00050081|Name=TCONS_00050081|organism=Clytia hemisphaerica|type=transcript|length=10254bp|location=Sequence derived from alignment at scaffold_167:947391..957644- (Clytia hemisphaerica)
AAACTAATCAGCTAATCACACATTTGAAAGGTAGGTTCTTGATTACATCA
CATCCCAAACCAAATGAAGCATTGTACCGTGAAGTCCATAACTTGCATCA
GTAGTGGAGAGAAAGTTTTGTTGCATCGCCCACAAATGAATGACCTGGAT
GGTCATTAAAATACAAAGTTAAATCAAAACAAAATGGTTGAGTCGAACTG
CGAGCGGAGCAGCTTTGATTGGTCAGTTATTTGATGGCTATCTATGCAAG
TTTCCCTCCACTGATGCGAGTTACCCGACACGGTACCATTTTAGAGAATC
TCATATTTGCCGTGCAAGTAATTTTGGCAAGTTACTCGCCGACAGAATCC
CGGGTAAATGAAACAGCATGGTTGGATAATAAAAAATCATGCGAGATCAT
GCATTTCAAGATGGCAGGAATTCAGATGTTTCTCGATGGGCTGCGCTGGG
ACGTGCAACCTCAAATTTAATAATGATAATATTAAACATATATGATGCAT
GACATCACTTATGATTAGGGGATATGTATTTTCCACCTGCAAATTTTGTA
AATCAGGTGTATGCAATGACTTCAGGGTAGATAAGAGCTGCAAGCGGAGC
TGCATAGTTCATCGTAGTTCATTTGTTTTGAAATTTTGCTGCTTTTACTG
GTCAGTCATTTGATGGCTATGCAATTTTCCCTTCATTGATGAAAGTTACC
CAACTTCATGGTATGGTATTGACCATGAAATTCCGGTGTCAGTACAGGTC
ATGTCACGGCCCGGTTGTTCAAGTAAAAGTGGATTAGTGGCTGATAAGCT
TAAATTTTTCCAAAAATCTCTATTAGCGCTGATTAAGACAGGCAACAGAA
TCCACAGTTGTTAGGAAAAAAATTAGGCTAAAAGTTGTGATTAAATTCCG
ATTAAATAGACCAAATTTTAATCATTCTCTGACCCACAATAAAGCTGTTA
TATATATTATGTTATAAATCATTAAAAGCAGAATCTTGAGTAGATTTTTA
TTCTTAAGAAGTGATGGCTTAAAAAGAACTTACAAAATCAAATTATGGTT
TGTTTGACCTAACCTAACATAAGGTTAGCCCTGTATTTGCCTTAATTTAA
AGATTAAGAAAATGCTGGGAAAAACATTTCTAATTACTTATTTCTACTTT
CTACTATTATGTCCTCTAGTTGCTTAAATGAGTTTGCAACCAAAGTGGAA
GGCAAGCCAAAGGCTCTAAGCTATCTACCCAAAGGAAAGGGAGGGTTTTG
GATGAACAACCAGCTGTAAGATCATCACATTTTCCATCTCATAGTTTTGT
TATGGTATTAAAATCAAACTTATATTTTTGCCACCAATATTAAGTAAATC
AATTAGTTGTAGGCCATACTCTGCTTAGTTTTATCAAAATTTCAATATTT
GAACCTGTACTTTGATTGGGATAAATCTGCGCGAAAAATTCCAGAATGTG
GAAATCACGAAATTTAGTACTGACAGTACTTGTGAAACACGTTTCCATGA
AAAAATTAGTACCCACGAAAATATATACAATATCAAAAATAGATATTGCA
GTTTGTTTATTCTGAAATTTTAAGATAGAAACATAATTTTAGAAACACAC
AATGTCTTAGTTATTCATTTGAAGAAAAGATTTATAATAAGGACTTAAAA
AAAATGTTTCCTTGGATTTTCATTTCTATTGTAGTTTCCATATTAAAACA
ACTTATACAAATAAGTAATTCTGTTTTGTTTTTGCTTTTTAAAAGACTTT
TTACTAGATCAGATATATGGTACTTTCTTTGATATAACTATATTAAGGGG
AAAGATATTCCAAATCATTTATCAAACAGTGCAATTTCAAAAGCAAACTT
TTTGCACCTTTTTTCTGCTCTATCATATTTCATCTAGTTGCAAATTTTTT
GTTGCTATGGTAATATCTTGTTTATTACTTCTCAAATTGGATAGGACAGC
GGATACAAAACCATCACTCTGGCTTCACTGTGTACATTTGGGGTAAAATA
AAGTGATTTGGCTAGTTTGAATTCTCAAATGGTTAGGGCACTTGGTGTCT
CGATATACTTGTTTTGTTCAAGACTTTTTAATGTACCTTAATATTGAATA
CACCTGGACCATTTCTTCAAGAAAGGAATCTATTTAGTTTGTATCTGAGA
AAAAAAACTCCTAAAAGACCTATCCATCTCATTTAAAATTGCATTGAAAA
TACTGTATCTGATGATCATGTAATTGTTTTTTTGGTTTAATTTCAGCTTG
CTTGGCCTTGTCTAATGAGGAATTTTATATTCAGAAAATATTTTATTTTT
ACGGATCTTTTTCTTCATAGAATCACTTAATTTGGAGTGTCCTAAACAGA
TGCTTTGGATTTAAAAGTAGCTTTACTTTTGGGACTTGATAAGGGAATGT
AGGGGAATCAAGTCTCTATACGATGCTTTGATTTAACACTTTTATTTGAG
TTTGGATTTGGAGATGTGTACAGGAATATCTTTTAATAAATTAATCTATC
TTTGAAATTATATGAGTGATTTATATCTAAAAAGCAGTATGAAAATTTTA
TTTTTCAATTAATAGAAAGCCCTCTGCCTACCCTATGCTGGTATGGTCAA
AAGGAATTTCATTTTAGGATTTGTGCATAATTGATATTCTAGTTCCAATA
GAATCGTTCTTATTGCTTTACTGGTCAAAATCTGGTCTTTATTATAATCT
TGTTCTTTTCAAGTATTAAAGCGAATCTTTTGTTTTAAGAGGTTTTTCTA
TCGAAATAAAGTTTGAGAGAGAGCTTAATGTAAGAGGAACCTAGCCTATA
GGAGTATTTCTGAACTTCTAAACAAACACTATATTAGAACCTTGGCTGAA
TAGGATCATCATCTTCAATTCAAGTAGACTATTTCATTTTAAGGTATTTA
AACTCAAGAAAGTTTGCTATTACTTCTATCATGAAGCATAAGTCATATAG
TCTATGAACAGCTTTTGGATGTCGTTCTACACAAGGGAAGTTACAAAACA
AACTCAAAGTTTCTTTGACAAAACACTCCTTCATTAATTTGAGTACCTTA
ATGGATCAGTTCAAGGACTACTAGAATCGCTTAAGCACAGCATGGGAAAG
TTTGTCGATATGTAGCGAGGGTACTTGAAAGTCTAGGTTTTATTTGCACT
TTAGATATAAAATACTAATGACAGAACATTCTACTTTTCATATTTTTGCT
TCTTTTATAATTTTAGAAGTAAAATAATGCAGAAATCAAAGATATCAAAT
TCGAAAAACTTGACATAAAATGGGTTGTGGCTCCTCAAAAGTTGCTGTTA
GTACAGTACTCGTAAATGGCACACAGGACGGCGCCATACTTAAAGATGCT
AACGGAAATATCACACAATCAAAACCTATTGGTTCTAATGAAAAAGAGAG
ACTTGGCTCTCAGCTAGGATCAAGTAATCGATTAGGTCCTGTTGAAAGTC
TTGGTATTTTTCGAAAACGCAAGAAGAATTTGTATCAATCTCTGGATGTC
TTTGAACAAATCGATCAACGTTCTGTCACGGTTGGTTTCTTTCAGCTTTC
CATCCTAGAACGATTGAATTTTCATAAAAACGCCCTGTTCAGTTTTGCTA
CCTTAAGGGAACTTATTTTGGCGGGAACTAATTTTGGCGAATTTGGCGAA
TTTAGACGAAATTCGCCAAATTTAGTTCCCGCCAAAATTAAATATTTTGC
TCACTCGCCAAAATAAGTTCCCGCCAAAATTAGATTTTTTGTTTCCTTGC
CTAAATAACCCCTGAAATTCATCAAAATTGCTCAAAATAAGGTAAAATAG
AACAGATTTACGCTGTCATTCGCCAAAATTGGTTCCCGCCAAAATTTAAA
AAATTCACTATTCGCCAAAATTAGTTCTCGCCAAAATTAAAATTTTTAAA
GATTTTCACTGCTCGCCAAAATTAGTTCCGGCCAAATAAGTTCCCTTAAG
GTATATATTTTTTAGGAAATGTTTTATTCGTGTAAAAATCTGCTTGTAGA
ATCACAACAAATGTGCTTATAAGCACGCAAGCACGCCTTAGATACCTTTA
ACCACCACGGACTTATTCATTTTTTTCTATGTTCAACTGTTATATATCTT
TTGTCAAACGATGCAATTAACGTGCAAAAGAGATTAGCGCAAAGGTTGAT
GGGATTGGAACTCGTACAAACACATCGAGAGTAATGATTATGTCAAAAGT
AAAATCTATTTTTAGATTCAGCACGGTGCGCTATTTAAAGTCGGCATTCG
GCAGTGTTGACCCAAAAAGCGACTTAAGTATGAGTAGAGTCATCATCAAT
TCTCTCGAAAACCGAAAATAAATTGCCCAAAAAGTCAATCATCTCCTAAT
GCATATCATAGGAGTAAGTGACAAGCAACCATCCACAGCCTTAATAAATA
AAATTCCGACCTAAAACTCAGACACAGATCGAAAAATTTTTGCGGGCCTT
TTTGTACGTTTCGACGCACTTTTATTGATTTACACATCATTTCTGTGTCT
AGCTATGCAATCACTAGCCTATACTAGACGTCACCCGCGTTTGTTTTACG
CAATTAAATCGTCAAAGTGGAACTCACTAAGAAACGAGATGAAAAATCCC
GGTTTTTAGTGAGGTGCTCGCTATGCAATCACTGGTTTATTAGCCCATAC
CGCTAAAATATTTTTAATTTATTTGGTTTGTGCTTTATTGTAGGTGCCAT
CTACTGTTTCAAGGACTGCTCAATCTTTAGTTCAATATTTGACTGAACCT
TACGAAGCACCCCTATTCAAACTACGTGCAATCTGGATATGGGTCACTCA
TAATATCTCCTATGACGTCAATTCTTTTTTCAATCCAAGTGAAAAGAAAA
GCTCCCAGTTAGATGCATCGGACGTGCTATCAAGCGGAAAAGCTATTTGC
TCAGGTTATGCTAATCTGATAAATGTTTTAGCAGAGTAAGTTGCTTTTAT
TTTGTTTTGTTAATTGTACCTTTTGGTTGTGTTTCATAATGAGTATCAAC
AAAAAGCTTCCTTTTGGTTTCTGAAATTCTGCCCCTATGCAACAACTTTT
TTTAATATGTGCTGTTTTATAGTCAATTGTTGCTTTTTGAGTGTATTTTA
CTATTATAGGGAATAAGGGGCTGTAAATTTGTAGTTTGGTTGAACTATTA
TGAAAAAACATTCGCAAATGTTGTGTTAATATCCCTTAAGTAGGAGATCC
GCCTCTAGACGTCGGCTAAATTTTATTGTTTTGACACCCCTGTCTCAAAG
AACTTACCAGTGGATACCCTTAAAACCACATACCCCTTAAAACCCACAAT
GTTGCATTTTTGGCTTTCATAACTACCAGATTTAATTTTATGTNNNNNNN
NNNNNNATTTATTTGGTTTGTGCTTTATTGTAGGTGCCATCTACTGTTTC
AAGGACTGCTCAATCTTTAGTTCAATATTTGACTGAACCTTACGAAGCAC
CCCTATTCAAACTACGTGCAATCTGGATATGGGTCACTCATAATATCTCC
TATGACGTCAATTCTTTTTTCAATCCAAGTGAAAAGAAAAGCTCCCAGCT
AGATGCATCGGACGTGCTATCAAGCGGAAAAGCTATTTGCTCAGGTTATG
CTAATCTGATAAATGTTTTAGCAGAGTAAGTTGCTTTTATTTTGTTTTGT
TAATTGTACCTTTTGGTTGTGTTTCATAATGAGTATCAACAAAAAGCTTC
CTTTTGGTTTCTGAAATTCTGCCCCTCTGCAACAATAGTACCGTGGTTAC
GCCCCAATAATTTTTTTAAGGATAAGTTTTTTCCTCATTTTGTCATTTAA
AGACTTTTTAATATGTGCTGTTTTTTAGTCAATTGTTGCTTTTTGAGTGT
ATTTTACTATTATAGGGAATAAGGGGCTGTAAATTTGTAGTTTGGTTGAA
CTATTATGAAAAAACATTTAAGTAGGAGATCCGCCTCTAGACGTCGGCTA
AATTTTATTGTTTTGACACCCCTGTCTCAAAGAACTTACTAATTTTTCAG
TTGTTTTAACTTTTAACGTGAATAATAATGCTTTTTCATTAAATTTCCTT
TTTTAATGAATTGGGGTTTTCAAAAAAATGTCATTCCAGTGAGAATAAGA
ACCCAGTGTACTTCCCAAAGATGTTGAAAATATAATTATCTCACCGAAAA
CAAGTGTTTGGTCGAATTTTCCTCTGGTGTAATAAAGGTAAAAAATTGGT
TTCTATTATTTTACAGATCAGCTGGAATTAAAACTGAGCGCGTGGATGGT
TGGTCTAAAGGCTACAATTATCAATATGGTCAAAAGTTTGGAGACATGAG
TCCGAATCATGCATGGAATGTCGTAAAACTGAACAATGATTGGTGGCTGC
TAGATTCAACATGGGGCGCTGGCTACGTAGACAAAGAGAAGAATTTCGTA
CGACAGTATAGTGAACATTATTTTCTAACGGATCCTAAACAATTCATTTT
CGATCATTGTCCGACAGACATGCATTGGCAGCTATTGGAAGAAATGATCG
CCGTTGANAAAAAAATGTCATTCCAGTGAGAATAAGAACCCAGTGTACTT
CCCAAAGATGTTGAAAATATAATTATCTCACCGAAAACAAGTGTTTGGTC
GAATTTTCCTCTGGTGTAATAAAGGTAAAAAATTGGTTTCTATTATTTTA
CAGATCAGCTGGAATTAAAACTGAGCGCGTGGATGGTTGGTCTAAAGGCT
ACAATTATCAATATGGTCAAAAGTTTGGAGACATGAGTCCGAATCATGCA
TGGAATGTCGTAAAACTGAACAATGATTGGTGGCTGCTAGATTCAACATG
GGGCGCTGGCTACGTAGACAAAGAGAAGAATTTCGTACGACAGTATAGTG
AACATTATTTTCTAACGGATCCTAAACAATTCATTTTCGATCATTGTCCG
ACAGACATGCATTGGCAACTATTGGAAGAAATGATCGCCGTTGAACGGTT
CGAAAATTACGCTCGAGTTACGAAACATTTCTTTCGCCTCAAAATGAAAT
TATTTTCACATCAAAACGGAATTGTTGTATGCGAAACTGGCCGTTTACAT
CTTAAGTTCCGTATTGATAAAGATATTCCGATAAAATGTACCGGAAAATT
ATCGGAAGTTGACGGAGATGTGGATACGGATCAATACATTCATGTTTATT
CGACAGAAAAGACGCTTCACGTTTTAGTCGATGTTCCTCGCGTTGGACAA
TTTGATTTGAAAATATTCGCACGAGAACTGAACTCAGAGCAGAGCAATTT
GAATTTAGTATGCAGGTATGCGATCACGTGTACTAATAAATTGGGACCGA
GCTCAAGTTTTCCTAGACAATTCAAAAGATGGAGTCCAGGCTTTTATTTA
CATTCTCCAACTGATGGTGTTTTGTATAACGGTGAAACGTACAAGTTCCG
AATTAGTTTACCGAATGTTACGGAAATGGCAGTTTGTTTGGGTAAAAAGT
ATTTCTGCTCTATCGGTCTTTTCATCACTTATATCACGGATAACATCTGT
CTCATCTTCAAACAGTGTCCAATCTTTCATTAATGAAAAGAATGTACCTC
CTAGAAACTTTGATGGTTGTCATAGCATTGACAAACGCAGCCCTTTATTT
AGAAAAGAAAATTTCAATCGACCTTTCGGAAATTGAAAAAACCAGCGATG
TGAAATAAATTTATGGCAATCTTGCTTCTAGCGCCAGATTAGGAGTGGTT
CTGTCCTGAATTTTGAGTTGGTCAAAATTCATGGCAAAGAACTAAAATCC
TCGACATTTTAATTTCGGGAAAACCGATCAAAGAATACCTTAGAGTGTGT
TTTATAGCATTGACAAACGCAGCCCTTTATTTAGAAAAGAAAATTTCAAT
CGACCTTTCGAAAAACAGTTTTAAATGTTACAAAATTTGTTTTTCTTGAA
TGATTTCTTGANGGCTACAATTATCAATATGGTCAAAAGTTTGGAGACAT
GAGTCCGAATCATGCATGGAATGTCGTAAAACTGAACAATGATTGGTGGC
TGCTAGATTCAACATGGGGCGCTGGCTACGTAGACAAAGAGAAGAATTTC
GTACGACAGTATAGTGAACATTATTTTCTAACGGATCCTAAACAATTCAT
TTTCGATCATTGTCCGACAGACATGCATTGGCAACTATTGGAAGAAATGA
TCGCCGTTGAACGGTTCGAAAATTACGCTCGAGTTACGAAACATTTCTTT
CGCCTCAAAATGAAATTATTTTCACATCAAAACGGAATTGTTGTATGCGA
AACTGGCCGTTTACATCTTAAGTTCCGTATTGATAAAGATATTCCGATAA
AATGTACCGGAAAATTATCGGAAGTTGACGGAGATGTGGATACGGATCAA
TACATTCATGTTTATTCGACAGAAAAGACGCTTCACGTTTTAGTCGATGT
TCCTCGCGTTGGACAATTTGATTTGAAAATATTCGCACGAGAACTGAACT
CAGAGCAGAGCAATTTGAATTTAGTATGCAGGTATGCGATCACGTGTACT
AATAAATTGGGACCGAGCTCAAGTTTTCCTAGACAATTCAAAAGATGGAG
TCCAGGCTTTTATTTACATTCTCCAACTGATGGTGTTTTGTATAACGGTG
AAACGTACAAGTTCCGAATTAGTTTACCGAATGTTACGGAAATGGCAGTT
TGTTTGGGTAAAAAGTATTTCTGCTCTATCGGTCTTTTCATCACTTATAT
CACGGATAACATCTGTCTCATCTTCAAACAGTGTCCAATCTTTCATTAAT
GAAAAGAATGTACCTCCTAGAAACTTTGATGGTTGTCATAGCATTGACAA
ACGCAGCCCTTTATTTAGAAAAGAAAATTTCAATCGACCTTTCGGAAATT
GAAAAAACCAGCGATGTGAAATAAATTTATGGCAATCTTGCTTCTAGCGC
CAGATTAGGAGTGGTTCTGTCCTGAATTTTGAGTTGGTCAAAATTCATGG
CAAAGAACTAAAATCCTCGACATTTTAATTTCGGGAAAACCGATCAAAGA
ATACCTTAGAGTGTGTTTTATAATATACATGCCATTATTTTATTTCGTTT
GCATTTATTTTCTTGACAGGTGGAAAGAATTCTACATGGGAACGCATTCC
AAACAGTCGAGGTGCATTATGGGAAGGTGAAATCACGCTTCCTGATTGGG
TGGAACGAGTGAACGTGGTGGCACGTTTTGAAGAAAAAACTCCTTTCTCC
AGTCTTTTGGAATACAAAGTCGCTGAAAAGGATTGGGCAATTGAAAATTG
TGAAAATGAACATTCATAATATTCGTGATATTCATTTCGTAATGTTTTCT
ACGGAATCACACCGGCAATTTTTAAACAATTTTTCTCCAGATTGAATTTA
CCACTACTGGAAAAAACCGAGGTGTTACCGTAGAAAATATTACGTCATGA
ATACATCCCCTTCTCACAGACCCGGTAGCATTTTTTAAGCCAGTGGGGAT
AAAAATAACGGACTAAAACTCGATGGGGATTGATATTCCCATATTTTTTA
TGGCTGAGGATTTCAATTCTTTTGTTTTTAAGTCAGAAAATTCAGTGGGA
ATGGGAAAAATAGTAAATATTTTGCAGTGAGGATTGTTTTTTTAATCCTT
TTCGGTGAGGACAAAAATTGGAGGATAATTTTCCACCGGGGGCGATATTT
TGGCCAATTTTTCCAGTGGGAAGGGGTCCCAGTGGGTCAATGAGGAAGGG
GTGTATGAATATAATGAATCATACAAATTACGAATTTTGAGATGTTTTTT
TTATCATTCGTTAATAAGGAAGTCTCTTATATTTGTTAACAAGGAAAGCT
ACCCCAAGGAACCGATCTCCACGCAAATTTCTATATTTGAATATACTTTA
ATCTGCAAAATATTCCGGCAAAATTTGCCCCGAGGATGTCTCAGAAGAAA
ACCGAAGATCAGCTTTTTCTATAATTTATGATTTTCAGCAGTCTATAAAT
AATTTCATTTACAGCATTTATACATAAAAATAATGTGAAAATCTTTCTAA
AACTAAGTTGATACATTATTGATTTTTATTGGTCTGGTTATGCATCAGTA
TACTGAAGTGATTTTATATTTTTAAATAGTTTAAAGTTTGTTTTAAATAT
TAATTGGTTTTAAATTTTTGATTGTTGTGCTATTTTTTTTTTAAATTCAA
ACAATGTAAATAGTTAATTTAGATGCTATTTTTATACATCAAAAGATCAA
AGCATAATTGGGAAAGCGAAAACTCAAACTGGTATGATTAATCCAAAAAA
TATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031711XLOC_031711Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050081-exon-scaffold_167-1575043694:957615..957644TCONS_00050081-exon-scaffold_167-1575043694:957615..957644Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1575043694:954115..954428TCONS_00050081-exon-scaffold_167-1575043694:954115..954428Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1575043694:952020..952261TCONS_00050081-exon-scaffold_167-1575043694:952020..952261Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1575043694:950204..950991TCONS_00050081-exon-scaffold_167-1575043694:950204..950991Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1575043694:947391..948575TCONS_00050081-exon-scaffold_167-1575043694:947391..948575Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1510915933:957615..957644TCONS_00050081-exon-scaffold_167-1510915933:957615..957644Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1510915933:954115..954428TCONS_00050081-exon-scaffold_167-1510915933:954115..954428Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1510915933:952020..952261TCONS_00050081-exon-scaffold_167-1510915933:952020..952261Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1510915933:950204..950991TCONS_00050081-exon-scaffold_167-1510915933:950204..950991Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1510915933:947391..948575TCONS_00050081-exon-scaffold_167-1510915933:947391..948575Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1491911889:957615..957644TCONS_00050081-exon-scaffold_167-1491911889:957615..957644Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1491911889:954115..954428TCONS_00050081-exon-scaffold_167-1491911889:954115..954428Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1491911889:952020..952261TCONS_00050081-exon-scaffold_167-1491911889:952020..952261Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1491911889:950204..950991TCONS_00050081-exon-scaffold_167-1491911889:950204..950991Clytia hemisphaericaexon
TCONS_00050081-exon-scaffold_167-1491911889:947391..948575TCONS_00050081-exon-scaffold_167-1491911889:947391..948575Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:947391..957644 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.896228	0.517033	0	0.0231838	26.8459	21.7874	16.9792	16.6641	11.2852	12.9182	8.53677	10.9535	2.37419	1.17213	0.599529	1.00155	1.56776	1.20414	2.81258	2.96481	1.50817	4.07318	4.16733	2.69962	30.1648	23.2785	5.72699	4.87253	1.40953	0.811269
Blast
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BLAST of TCONS_00050081 vs. Swiss-Prot (Human)
Match: KY (Kyphoscoliosis peptidase OS=Homo sapiens GN=KY PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.280e-35
Identity = 83/220 (37.73%), Postives = 115/220 (52.27%), Query Frame = 3 
Query:  276 RKRKKNLYQSLDVFEQIDQRSVTVPSTVSRTAQSLVQYLTEPYEAPLFKLRAIWIWVTHNISYDVNSFFNPSEKKSSQLDASDVLSSGKAICSGYANLINVLAESAGIKTERVDGWSKGYNYQYGQKF-GDMSPNHAWNVVKLNNDWWLLDSTWGAGYVDK-EKNFVRQYSEHYFLTDPKQFIFDHCPTDMHWQLLEEMIAVERFENYARVTKHFFRLKM 929
            R   K++   L  FE++D  +  V  T       LV  L +     L ++RAIWIW+ H+I YD+ +     EK       +D+L + K  C GYA L   +   AG++   V G+SKG+ YQ GQ F G+   +HAWN V L   W L+DSTWG+G VD     F   Y+E YFLT P  FI DH P + +WQLL+   ++ +FEN       F+   M
Sbjct:  139 RSSLKSMSLDLQQFEKLDIYASQV--TAKSGLDELVSDLLQEAHTDLERVRAIWIWICHHIEYDIAA---AQEKDRQAFKPTDILRTQKTNCDGYAGLFERMCRLAGVQCMTVPGYSKGFGYQTGQSFSGEF--DHAWNAVYLEGRWHLVDSTWGSGLVDTITSKFTFLYNEFYFLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENNMYHKSEFYNKGM 351
The following BLAST results are available for this feature:
BLAST of TCONS_00050081 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KY4.280e-3537.73Kyphoscoliosis peptidase OS=Homo sapiens GN=KY PE=... [more]
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