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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050084 ID=TCONS_00050084|Name=TCONS_00050084|organism=Clytia hemisphaerica|type=transcript|length=2552bp
GGTAGTGGTGGAAGTTGGAAGTGAAGTAAAATAATGCAGAAATCAAAGAT
ATCAAATTCGAAAAACTTGACATAAAATGGGTTGTGGCTCCTCAAAAGTT
GCTGTTAGTACAGTACTCGTAAATGGCACACAGGACGGCGCCATACTTAA
AGATGCTAACGGAAATATCACACAATCAAAACCTATTGGTTCTAATGAAA
AAGAGAGACTTGGCTCTCAGCTAGGATCAAGTAATCGATTAGGTCCTGTT
GAAAGTCTTGGTATTTTTCGAAAACGCAAGAAGAATTTGTATCAATCTCT
GGATGTCTTTGAACAAATCGATCAACGTTCTGTCACGGTGCCATCTACTG
TTTCAAGGACTGCTCAATCTTTAGTTCAATATTTGACTGAACCTTACGAA
GCACCCCTATTCAAACTACGTGCAATCTGGATATGGGTCACTCATAATAT
CTCCTATGAcgtcaattcttttttcaatccaagtgaaaagaaaagctcCC
AGCTAGATGCATCGGACGTGCTATCAAGCGGAAAAGCTATTTGCTCAGGT
TATGCTAATCTGATAAATGTTTTAGCAGAatcagcTGGAATTAAAACTGA
GCGCGTGGATGGTTGGTCTAAAGGCTACAATTATCAATATGGTCAAAAGT
TTGGAGACATGAGTCCGAATCATGCATGGAATGTCGTAAAACTGAACAAT
GATTGGTGGCTGCTAGATTCAACATGGGGCGCTGGCTACGTAGACAAAGA
GAAGAATTTCGTACGACAGTATAGTGAACATTATTTTCTAACGGATCCTA
AACAATTCATTTTCGATCATTGTCCGACAGACATGCATTGGCAACTATTG
GAAGAAATGATCGCCGTTGAACGGTTCGAAAATTACGCTCGAGTTACGAA
ACATTTCTTTCGCctcaaaatgaaattattttcacatcaaaacgGAATTG
TTGTATGCGAAACTGGCCGTTTACATCTTAAGTTCCGTATTGATAAAGAT
ATTCCGATAAAATGTACCGGAAAATTATCGGAAGTTGACGGAGATGTGGA
TACGGATCAATACATTCATGTTTATTCGACAGAAAAGACGCTTCACGTTT
TAGTCGATGTTCCTCGCGTTGgacaatttgatttgaaaatattcgCACGA
GAACTGAACTCAGAGCAGAGCAATTTGAATTTAGTATGCAGGTATGCGAT
CACGTGTACTAATAAATTGGGACCGAGCTCAAGTTTTCCTAGACAATTCA
AAAGATGGAGTCCAGGCTTTTATTTACATTCTCCAACTGATGGTGTTTTG
TATAACGGTGAAACGTACAAGTTCCGAATTAGTTTACCGAATGTTACGGA
AATGGCAGTTTGTTTGGGTGGAAAGAATTCTACATGGGAACGCATTCCAA
ACAGTCGAGGTGCATTATGGGAAGGTGAAATCACGCTTCCTGATTGGGTG
GAACGAGTGAACGTGGTGGCacgttttgaagaaaaaactcCTTTCTCCAG
TCTTTTGGAATACAAAGTCGCTGAAAAGGATTGGGCaattgaaaattgtg
aaaatgaaCATTCATAATATTCGTGATATTCATttcgtaatgttttctac
ggaatcACACCggcaatttttaaacaatttttctcCAGATTGAATTTACC
ACTACTGGAAAAAACCGAGGTGTTACCGtagaaaatattacgtcatgaat
acatccccttctcacagacccggtagcattttttaagccagtggggataa
aaataacggactaaaactcgatggggattgatattcccatattttttatg
gctgaggatttcaattcttttgtttttaagtcagaaaattcagtgggaat
gggaaaaatagtaaatattttgcagtgaggattgtttTTTTAATCCTTTT
CGGtgaggacaaaaattggaggataattttccaccgggggcgatattttg
gccaatttttccagtgggaaggggtcccagtgggtcaaTGAGGAAGGGGT
GTATGAATATAATGAATCATACAAATTACgaattttgagatgtttttttt
atcattcgTTAATAAGGAAGTCTCTTATATTTGTTAACAAGGAAAGCTAC
CCCAAGGAACCGATCTCCACGCAAATTTCTATATTTGAATATACTTTAAT
CTGCAAAATATTCCGGCAAAATTTGCCCCGAGGATGTCTCAGAAGAAAAC
CGAAGATCAGCTTTTTCTATAATTTATGATTTTCAGCAGTCTATAAATAA
TTTCATTTACAGCATTTATACATAAAAATAATgtgaaaatctttctaaaa
ctAAGTTGATACATTATTGATTTTTATTGGTCTGGTTATGCATCAGTATA
CTGAagtgattttatatttttaaatagtttaaagtttgttttaaatatta
attggttttaaatttttgattgttgtgctattttttttttaaattcaaac
aaTGTAAATAGTTAATTTAGATGCtatttttatacatcaaaagatCAAAG
CATAATTGGGAAAGCGAAAACTCAAACTGGTATGATTAATccaaaaaata
tc Run BLAST on NCBI protein sequence of TCONS_00050084-protein >TCONS_00050084-protein ID=TCONS_00050084-protein|Name=TCONS_00050084-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MGCGSSKVAVSTVLVNGTQDGAILKDANGNITQSKPIGSNEKERLGSQLG
SSNRLGPVESLGIFRKRKKNLYQSLDVFEQIDQRSVTVPSTVSRTAQSLV
QYLTEPYEAPLFKLRAIWIWVTHNISYDVNSFFNPSEKKSSQLDASDVLS
SGKAICSGYANLINVLAESAGIKTERVDGWSKGYNYQYGQKFGDMSPNHA
WNVVKLNNDWWLLDSTWGAGYVDKEKNFVRQYSEHYFLTDPKQFIFDHCP
TDMHWQLLEEMIAVERFENYARVTKHFFRLKMKLFSHQNGIVVCETGRLH
LKFRIDKDIPIKCTGKLSEVDGDVDTDQYIHVYSTEKTLHVLVDVPRVGQ
FDLKIFARELNSEQSNLNLVCRYAITCTNKLGPSSSFPRQFKRWSPGFYL
HSPTDGVLYNGETYKFRISLPNVTEMAVCLGGKNSTWERIPNSRGALWEG
EITLPDWVERVNVVARFEEKTPFSSLLEYKVAEKDWAIENCENEHS Run BLAST on NCBI transcript from alignment at scaffold_167:947391..957819- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050084 ID=TCONS_00050084|Name=TCONS_00050084|organism=Clytia hemisphaerica|type=transcript|length=10429bp|location=Sequence derived from alignment at scaffold_167:947391..957819- (Clytia hemisphaerica)
GGTAGTGGTGGAAGTTGGAAGTGGTGAGTAGTGTATAATTATTTTCCTGC
TTTATAATCTCATAATCTCAGGAAGCTTTTAGCACCAGTGAAAAAATGAC
TAAACTTATACTTTTGCTGCTCTCTGCTGCATGAACAGGGGAATTTCAAT
GTATATAACTACTTTTCACCAAATTAAACTAATCAGCTAATCACACATTT
GAAAGGTAGGTTCTTGATTACATCACATCCCAAACCAAATGAAGCATTGT
ACCGTGAAGTCCATAACTTGCATCAGTAGTGGAGAGAAAGTTTTGTTGCA
TCGCCCACAAATGAATGACCTGGATGGTCATTAAAATACAAAGTTAAATC
AAAACAAAATGGTTGAGTCGAACTGCGAGCGGAGCAGCTTTGATTGGTCA
GTTATTTGATGGCTATCTATGCAAGTTTCCCTCCACTGATGCGAGTTACC
CGACACGGTACCATTTTAGAGAATCTCATATTTGCCGTGCAAGTAATTTT
GGCAAGTTACTCGCCGACAGAATCCCGGGTAAATGAAACAGCATGGTTGG
ATAATAAAAAATCATGCGAGATCATGCATTTCAAGATGGCAGGAATTCAG
ATGTTTCTCGATGGGCTGCGCTGGGACGTGCAACCTCAAATTTAATAATG
ATAATATTAAACATATATGATGCATGACATCACTTATGATTAGGGGATAT
GTATTTTCCACCTGCAAATTTTGTAAATCAGGTGTATGCAATGACTTCAG
GGTAGATAAGAGCTGCAAGCGGAGCTGCATAGTTCATCGTAGTTCATTTG
TTTTGAAATTTTGCTGCTTTTACTGGTCAGTCATTTGATGGCTATGCAAT
TTTCCCTTCATTGATGAAAGTTACCCAACTTCATGGTATGGTATTGACCA
TGAAATTCCGGTGTCAGTACAGGTCATGTCACGGCCCGGTTGTTCAAGTA
AAAGTGGATTAGTGGCTGATAAGCTTAAATTTTTCCAAAAATCTCTATTA
GCGCTGATTAAGACAGGCAACAGAATCCACAGTTGTTAGGAAAAAAATTA
GGCTAAAAGTTGTGATTAAATTCCGATTAAATAGACCAAATTTTAATCAT
TCTCTGACCCACAATAAAGCTGTTATATATATTATGTTATAAATCATTAA
AAGCAGAATCTTGAGTAGATTTTTATTCTTAAGAAGTGATGGCTTAAAAA
GAACTTACAAAATCAAATTATGGTTTGTTTGACCTAACCTAACATAAGGT
TAGCCCTGTATTTGCCTTAATTTAAAGATTAAGAAAATGCTGGGAAAAAC
ATTTCTAATTACTTATTTCTACTTTCTACTATTATGTCCTCTAGTTGCTT
AAATGAGTTTGCAACCAAAGTGGAAGGCAAGCCAAAGGCTCTAAGCTATC
TACCCAAAGGAAAGGGAGGGTTTTGGATGAACAACCAGCTGTAAGATCAT
CACATTTTCCATCTCATAGTTTTGTTATGGTATTAAAATCAAACTTATAT
TTTTGCCACCAATATTAAGTAAATCAATTAGTTGTAGGCCATACTCTGCT
TAGTTTTATCAAAATTTCAATATTTGAACCTGTACTTTGATTGGGATAAA
TCTGCGCGAAAAATTCCAGAATGTGGAAATCACGAAATTTAGTACTGACA
GTACTTGTGAAACACGTTTCCATGAAAAAATTAGTACCCACGAAAATATA
TACAATATCAAAAATAGATATTGCAGTTTGTTTATTCTGAAATTTTAAGA
TAGAAACATAATTTTAGAAACACACAATGTCTTAGTTATTCATTTGAAGA
AAAGATTTATAATAAGGACTTAAAAAAAATGTTTCCTTGGATTTTCATTT
CTATTGTAGTTTCCATATTAAAACAACTTATACAAATAAGTAATTCTGTT
TTGTTTTTGCTTTTTAAAAGACTTTTTACTAGATCAGATATATGGTACTT
TCTTTGATATAACTATATTAAGGGGAAAGATATTCCAAATCATTTATCAA
ACAGTGCAATTTCAAAAGCAAACTTTTTGCACCTTTTTTCTGCTCTATCA
TATTTCATCTAGTTGCAAATTTTTTGTTGCTATGGTAATATCTTGTTTAT
TACTTCTCAAATTGGATAGGACAGCGGATACAAAACCATCACTCTGGCTT
CACTGTGTACATTTGGGGTAAAATAAAGTGATTTGGCTAGTTTGAATTCT
CAAATGGTTAGGGCACTTGGTGTCTCGATATACTTGTTTTGTTCAAGACT
TTTTAATGTACCTTAATATTGAATACACCTGGACCATTTCTTCAAGAAAG
GAATCTATTTAGTTTGTATCTGAGAAAAAAAACTCCTAAAAGACCTATCC
ATCTCATTTAAAATTGCATTGAAAATACTGTATCTGATGATCATGTAATT
GTTTTTTTGGTTTAATTTCAGCTTGCTTGGCCTTGTCTAATGAGGAATTT
TATATTCAGAAAATATTTTATTTTTACGGATCTTTTTCTTCATAGAATCA
CTTAATTTGGAGTGTCCTAAACAGATGCTTTGGATTTAAAAGTAGCTTTA
CTTTTGGGACTTGATAAGGGAATGTAGGGGAATCAAGTCTCTATACGATG
CTTTGATTTAACACTTTTATTTGAGTTTGGATTTGGAGATGTGTACAGGA
ATATCTTTTAATAAATTAATCTATCTTTGAAATTATATGAGTGATTTATA
TCTAAAAAGCAGTATGAAAATTTTATTTTTCAATTAATAGAAAGCCCTCT
GCCTACCCTATGCTGGTATGGTCAAAAGGAATTTCATTTTAGGATTTGTG
CATAATTGATATTCTAGTTCCAATAGAATCGTTCTTATTGCTTTACTGGT
CAAAATCTGGTCTTTATTATAATCTTGTTCTTTTCAAGTATTAAAGCGAA
TCTTTTGTTTTAAGAGGTTTTTCTATCGAAATAAAGTTTGAGAGAGAGCT
TAATGTAAGAGGAACCTAGCCTATAGGAGTATTTCTGAACTTCTAAACAA
ACACTATATTAGAACCTTGGCTGAATAGGATCATCATCTTCAATTCAAGT
AGACTATTTCATTTTAAGGTATTTAAACTCAAGAAAGTTTGCTATTACTT
CTATCATGAAGCATAAGTCATATAGTCTATGAACAGCTTTTGGATGTCGT
TCTACACAAGGGAAGTTACAAAACAAACTCAAAGTTTCTTTGACAAAACA
CTCCTTCATTAATTTGAGTACCTTAATGGATCAGTTCAAGGACTACTAGA
ATCGCTTAAGCACAGCATGGGAAAGTTTGTCGATATGTAGCGAGGGTACT
TGAAAGTCTAGGTTTTATTTGCACTTTAGATATAAAATACTAATGACAGA
ACATTCTACTTTTCATATTTTTGCTTCTTTTATAATTTTAGAAGTAAAAT
AATGCAGAAATCAAAGATATCAAATTCGAAAAACTTGACATAAAATGGGT
TGTGGCTCCTCAAAAGTTGCTGTTAGTACAGTACTCGTAAATGGCACACA
GGACGGCGCCATACTTAAAGATGCTAACGGAAATATCACACAATCAAAAC
CTATTGGTTCTAATGAAAAAGAGAGACTTGGCTCTCAGCTAGGATCAAGT
AATCGATTAGGTCCTGTTGAAAGTCTTGGTATTTTTCGAAAACGCAAGAA
GAATTTGTATCAATCTCTGGATGTCTTTGAACAAATCGATCAACGTTCTG
TCACGGTTGGTTTCTTTCAGCTTTCCATCCTAGAACGATTGAATTTTCAT
AAAAACGCCCTGTTCAGTTTTGCTACCTTAAGGGAACTTATTTTGGCGGG
AACTAATTTTGGCGAATTTGGCGAATTTAGACGAAATTCGCCAAATTTAG
TTCCCGCCAAAATTAAATATTTTGCTCACTCGCCAAAATAAGTTCCCGCC
AAAATTAGATTTTTTGTTTCCTTGCCTAAATAACCCCTGAAATTCATCAA
AATTGCTCAAAATAAGGTAAAATAGAACAGATTTACGCTGTCATTCGCCA
AAATTGGTTCCCGCCAAAATTTAAAAAATTCACTATTCGCCAAAATTAGT
TCTCGCCAAAATTAAAATTTTTAAAGATTTTCACTGCTCGCCAAAATTAG
TTCCGGCCAAATAAGTTCCCTTAAGGTATATATTTTTTAGGAAATGTTTT
ATTCGTGTAAAAATCTGCTTGTAGAATCACAACAAATGTGCTTATAAGCA
CGCAAGCACGCCTTAGATACCTTTAACCACCACGGACTTATTCATTTTTT
TCTATGTTCAACTGTTATATATCTTTTGTCAAACGATGCAATTAACGTGC
AAAAGAGATTAGCGCAAAGGTTGATGGGATTGGAACTCGTACAAACACAT
CGAGAGTAATGATTATGTCAAAAGTAAAATCTATTTTTAGATTCAGCACG
GTGCGCTATTTAAAGTCGGCATTCGGCAGTGTTGACCCAAAAAGCGACTT
AAGTATGAGTAGAGTCATCATCAATTCTCTCGAAAACCGAAAATAAATTG
CCCAAAAAGTCAATCATCTCCTAATGCATATCATAGGAGTAAGTGACAAG
CAACCATCCACAGCCTTAATAAATAAAATTCCGACCTAAAACTCAGACAC
AGATCGAAAAATTTTTGCGGGCCTTTTTGTACGTTTCGACGCACTTTTAT
TGATTTACACATCATTTCTGTGTCTAGCTATGCAATCACTAGCCTATACT
AGACGTCACCCGCGTTTGTTTTACGCAATTAAATCGTCAAAGTGGAACTC
ACTAAGAAACGAGATGAAAAATCCCGGTTTTTAGTGAGGTGCTCGCTATG
CAATCACTGGTTTATTAGCCCATACCGCTAAAATATTTTTAATTTATTTG
GTTTGTGCTTTATTGTAGGTGCCATCTACTGTTTCAAGGACTGCTCAATC
TTTAGTTCAATATTTGACTGAACCTTACGAAGCACCCCTATTCAAACTAC
GTGCAATCTGGATATGGGTCACTCATAATATCTCCTATGACGTCAATTCT
TTTTTCAATCCAAGTGAAAAGAAAAGCTCCCAGTTAGATGCATCGGACGT
GCTATCAAGCGGAAAAGCTATTTGCTCAGGTTATGCTAATCTGATAAATG
TTTTAGCAGAGTAAGTTGCTTTTATTTTGTTTTGTTAATTGTACCTTTTG
GTTGTGTTTCATAATGAGTATCAACAAAAAGCTTCCTTTTGGTTTCTGAA
ATTCTGCCCCTATGCAACAACTTTTTTTAATATGTGCTGTTTTATAGTCA
ATTGTTGCTTTTTGAGTGTATTTTACTATTATAGGGAATAAGGGGCTGTA
AATTTGTAGTTTGGTTGAACTATTATGAAAAAACATTCGCAAATGTTGTG
TTAATATCCCTTAAGTAGGAGATCCGCCTCTAGACGTCGGCTAAATTTTA
TTGTTTTGACACCCCTGTCTCAAAGAACTTACCAGTGGATACCCTTAAAA
CCACATACCCCTTAAAACCCACAATGTTGCATTTTTGGCTTTCATAACTA
CCAGATTTAATTTTATGTNNNNNNNNNNNNNATTTATTTGGTTTGTGCTT
TATTGTAGGTGCCATCTACTGTTTCAAGGACTGCTCAATCTTTAGTTCAA
TATTTGACTGAACCTTACGAAGCACCCCTATTCAAACTACGTGCAATCTG
GATATGGGTCACTCATAATATCTCCTATGACGTCAATTCTTTTTTCAATC
CAAGTGAAAAGAAAAGCTCCCAGCTAGATGCATCGGACGTGCTATCAAGC
GGAAAAGCTATTTGCTCAGGTTATGCTAATCTGATAAATGTTTTAGCAGA
GTAAGTTGCTTTTATTTTGTTTTGTTAATTGTACCTTTTGGTTGTGTTTC
ATAATGAGTATCAACAAAAAGCTTCCTTTTGGTTTCTGAAATTCTGCCCC
TCTGCAACAATAGTACCGTGGTTACGCCCCAATAATTTTTTTAAGGATAA
GTTTTTTCCTCATTTTGTCATTTAAAGACTTTTTAATATGTGCTGTTTTT
TAGTCAATTGTTGCTTTTTGAGTGTATTTTACTATTATAGGGAATAAGGG
GCTGTAAATTTGTAGTTTGGTTGAACTATTATGAAAAAACATTTAAGTAG
GAGATCCGCCTCTAGACGTCGGCTAAATTTTATTGTTTTGACACCCCTGT
CTCAAAGAACTTACTAATTTTTCAGTTGTTTTAACTTTTAACGTGAATAA
TAATGCTTTTTCATTAAATTTCCTTTTTTAATGAATTGGGGTTTTCAAAA
AAATGTCATTCCAGTGAGAATAAGAACCCAGTGTACTTCCCAAAGATGTT
GAAAATATAATTATCTCACCGAAAACAAGTGTTTGGTCGAATTTTCCTCT
GGTGTAATAAAGGTAAAAAATTGGTTTCTATTATTTTACAGATCAGCTGG
AATTAAAACTGAGCGCGTGGATGGTTGGTCTAAAGGCTACAATTATCAAT
ATGGTCAAAAGTTTGGAGACATGAGTCCGAATCATGCATGGAATGTCGTA
AAACTGAACAATGATTGGTGGCTGCTAGATTCAACATGGGGCGCTGGCTA
CGTAGACAAAGAGAAGAATTTCGTACGACAGTATAGTGAACATTATTTTC
TAACGGATCCTAAACAATTCATTTTCGATCATTGTCCGACAGACATGCAT
TGGCAGCTATTGGAAGAAATGATCGCCGTTGANAAAAAAATGTCATTCCA
GTGAGAATAAGAACCCAGTGTACTTCCCAAAGATGTTGAAAATATAATTA
TCTCACCGAAAACAAGTGTTTGGTCGAATTTTCCTCTGGTGTAATAAAGG
TAAAAAATTGGTTTCTATTATTTTACAGATCAGCTGGAATTAAAACTGAG
CGCGTGGATGGTTGGTCTAAAGGCTACAATTATCAATATGGTCAAAAGTT
TGGAGACATGAGTCCGAATCATGCATGGAATGTCGTAAAACTGAACAATG
ATTGGTGGCTGCTAGATTCAACATGGGGCGCTGGCTACGTAGACAAAGAG
AAGAATTTCGTACGACAGTATAGTGAACATTATTTTCTAACGGATCCTAA
ACAATTCATTTTCGATCATTGTCCGACAGACATGCATTGGCAACTATTGG
AAGAAATGATCGCCGTTGAACGGTTCGAAAATTACGCTCGAGTTACGAAA
CATTTCTTTCGCCTCAAAATGAAATTATTTTCACATCAAAACGGAATTGT
TGTATGCGAAACTGGCCGTTTACATCTTAAGTTCCGTATTGATAAAGATA
TTCCGATAAAATGTACCGGAAAATTATCGGAAGTTGACGGAGATGTGGAT
ACGGATCAATACATTCATGTTTATTCGACAGAAAAGACGCTTCACGTTTT
AGTCGATGTTCCTCGCGTTGGACAATTTGATTTGAAAATATTCGCACGAG
AACTGAACTCAGAGCAGAGCAATTTGAATTTAGTATGCAGGTATGCGATC
ACGTGTACTAATAAATTGGGACCGAGCTCAAGTTTTCCTAGACAATTCAA
AAGATGGAGTCCAGGCTTTTATTTACATTCTCCAACTGATGGTGTTTTGT
ATAACGGTGAAACGTACAAGTTCCGAATTAGTTTACCGAATGTTACGGAA
ATGGCAGTTTGTTTGGGTAAAAAGTATTTCTGCTCTATCGGTCTTTTCAT
CACTTATATCACGGATAACATCTGTCTCATCTTCAAACAGTGTCCAATCT
TTCATTAATGAAAAGAATGTACCTCCTAGAAACTTTGATGGTTGTCATAG
CATTGACAAACGCAGCCCTTTATTTAGAAAAGAAAATTTCAATCGACCTT
TCGGAAATTGAAAAAACCAGCGATGTGAAATAAATTTATGGCAATCTTGC
TTCTAGCGCCAGATTAGGAGTGGTTCTGTCCTGAATTTTGAGTTGGTCAA
AATTCATGGCAAAGAACTAAAATCCTCGACATTTTAATTTCGGGAAAACC
GATCAAAGAATACCTTAGAGTGTGTTTTATAGCATTGACAAACGCAGCCC
TTTATTTAGAAAAGAAAATTTCAATCGACCTTTCGAAAAACAGTTTTAAA
TGTTACAAAATTTGTTTTTCTTGAATGATTTCTTGANGGCTACAATTATC
AATATGGTCAAAAGTTTGGAGACATGAGTCCGAATCATGCATGGAATGTC
GTAAAACTGAACAATGATTGGTGGCTGCTAGATTCAACATGGGGCGCTGG
CTACGTAGACAAAGAGAAGAATTTCGTACGACAGTATAGTGAACATTATT
TTCTAACGGATCCTAAACAATTCATTTTCGATCATTGTCCGACAGACATG
CATTGGCAACTATTGGAAGAAATGATCGCCGTTGAACGGTTCGAAAATTA
CGCTCGAGTTACGAAACATTTCTTTCGCCTCAAAATGAAATTATTTTCAC
ATCAAAACGGAATTGTTGTATGCGAAACTGGCCGTTTACATCTTAAGTTC
CGTATTGATAAAGATATTCCGATAAAATGTACCGGAAAATTATCGGAAGT
TGACGGAGATGTGGATACGGATCAATACATTCATGTTTATTCGACAGAAA
AGACGCTTCACGTTTTAGTCGATGTTCCTCGCGTTGGACAATTTGATTTG
AAAATATTCGCACGAGAACTGAACTCAGAGCAGAGCAATTTGAATTTAGT
ATGCAGGTATGCGATCACGTGTACTAATAAATTGGGACCGAGCTCAAGTT
TTCCTAGACAATTCAAAAGATGGAGTCCAGGCTTTTATTTACATTCTCCA
ACTGATGGTGTTTTGTATAACGGTGAAACGTACAAGTTCCGAATTAGTTT
ACCGAATGTTACGGAAATGGCAGTTTGTTTGGGTAAAAAGTATTTCTGCT
CTATCGGTCTTTTCATCACTTATATCACGGATAACATCTGTCTCATCTTC
AAACAGTGTCCAATCTTTCATTAATGAAAAGAATGTACCTCCTAGAAACT
TTGATGGTTGTCATAGCATTGACAAACGCAGCCCTTTATTTAGAAAAGAA
AATTTCAATCGACCTTTCGGAAATTGAAAAAACCAGCGATGTGAAATAAA
TTTATGGCAATCTTGCTTCTAGCGCCAGATTAGGAGTGGTTCTGTCCTGA
ATTTTGAGTTGGTCAAAATTCATGGCAAAGAACTAAAATCCTCGACATTT
TAATTTCGGGAAAACCGATCAAAGAATACCTTAGAGTGTGTTTTATAATA
TACATGCCATTATTTTATTTCGTTTGCATTTATTTTCTTGACAGGTGGAA
AGAATTCTACATGGGAACGCATTCCAAACAGTCGAGGTGCATTATGGGAA
GGTGAAATCACGCTTCCTGATTGGGTGGAACGAGTGAACGTGGTGGCACG
TTTTGAAGAAAAAACTCCTTTCTCCAGTCTTTTGGAATACAAAGTCGCTG
AAAAGGATTGGGCAATTGAAAATTGTGAAAATGAACATTCATAATATTCG
TGATATTCATTTCGTAATGTTTTCTACGGAATCACACCGGCAATTTTTAA
ACAATTTTTCTCCAGATTGAATTTACCACTACTGGAAAAAACCGAGGTGT
TACCGTAGAAAATATTACGTCATGAATACATCCCCTTCTCACAGACCCGG
TAGCATTTTTTAAGCCAGTGGGGATAAAAATAACGGACTAAAACTCGATG
GGGATTGATATTCCCATATTTTTTATGGCTGAGGATTTCAATTCTTTTGT
TTTTAAGTCAGAAAATTCAGTGGGAATGGGAAAAATAGTAAATATTTTGC
AGTGAGGATTGTTTTTTTAATCCTTTTCGGTGAGGACAAAAATTGGAGGA
TAATTTTCCACCGGGGGCGATATTTTGGCCAATTTTTCCAGTGGGAAGGG
GTCCCAGTGGGTCAATGAGGAAGGGGTGTATGAATATAATGAATCATACA
AATTACGAATTTTGAGATGTTTTTTTTATCATTCGTTAATAAGGAAGTCT
CTTATATTTGTTAACAAGGAAAGCTACCCCAAGGAACCGATCTCCACGCA
AATTTCTATATTTGAATATACTTTAATCTGCAAAATATTCCGGCAAAATT
TGCCCCGAGGATGTCTCAGAAGAAAACCGAAGATCAGCTTTTTCTATAAT
TTATGATTTTCAGCAGTCTATAAATAATTTCATTTACAGCATTTATACAT
AAAAATAATGTGAAAATCTTTCTAAAACTAAGTTGATACATTATTGATTT
TTATTGGTCTGGTTATGCATCAGTATACTGAAGTGATTTTATATTTTTAA
ATAGTTTAAAGTTTGTTTTAAATATTAATTGGTTTTAAATTTTTGATTGT
TGTGCTATTTTTTTTTTAAATTCAAACAATGTAAATAGTTAATTTAGATG
CTATTTTTATACATCAAAAGATCAAAGCATAATTGGGAAAGCGAAAACTC
AAACTGGTATGATTAATCCAAAAAATATC Coding sequence (CDS) from alignment at scaffold_167:947391..957819- >TCONS_00050084 ID=TCONS_00050084|Name=TCONS_00050084|organism=Clytia hemisphaerica|type=CDS|length=5964bp|location=Sequence derived from alignment at scaffold_167:947391..957819- (Clytia hemisphaerica)
GTGGAAAGAATTCTACATGGGAACGCATTCCAAACAGTCGAGGTGCATTA
TGGGAAGGTGAAATCACGCTTCCTGATTGGGTGGAACGAGTGAACGTGGT
GGCACGTTTTGAAGAAAAAACTCCTTTCTCCAGTCTTTTGGAATACAAAG
TCGCTGAAAAGGATTGGGCAATTGAAAATTGTGAAAATGAACATTCATAA
ATCAGCTGGAATTAAAACTGAGCGCGTGGATGGTTGGTCTAAAGGCTACA
ATTATCAATATGGTCAAAAGTTTGGAGACATGAGTCCGAATCATGCATGG
AATGTCGTAAAACTGAACAATGATTGGTGGCTGCTAGATTCAACATGGGG
CGCTGGCTACGTAGACAAAGAGAAGAATTTCGTACGACAGTATAGTGAAC
ATTATTTTCTAACGGATCCTAAACAATTCATTTTCGATCATTGTCCGACA
GACATGCATTGGCAACTATTGGAAGAAATGATCGCCGTTGAACGGTTCGA
AAATTACGCTCGAGTTACGAAACATTTCTTTCGCCTCAAAATGAAATTAT
TTTCACATCAAAACGGAATTGTTGTATGCGAAACTGGCCGTTTACATCTT
AAGTTCCGTATTGATAAAGATATTCCGATAAAATGTACCGGAAAATTATC
GGAAGTTGACGGAGATGTGGATACGGATCAATACATTCATGTTTATTCGA
CAGAAAAGACGCTTCACGTTTTAGTCGATGTTCCTCGCGTTGGACAATTT
GATTTGAAAATATTCGCACGAGAACTGAACTCAGAGCAGAGCAATTTGAA
TTTAGTATGCAGGTATGCGATCACGTGTACTAATAAATTGGGACCGAGCT
CAAGTTTTCCTAGACAATTCAAAAGATGGAGTCCAGGCTTTTATTTACAT
TCTCCAACTGATGGTGTTTTGTATAACGGTGAAACGTACAAGTTCCGAAT
TAGTTTACCGAATGTTACGGAAATGGCAGTTTGTTTGGGTGCCATCTACT
GTTTCAAGGACTGCTCAATCTTTAGTTCAATATTTGACTGAACCTTACGA
AGCACCCCTATTCAAACTACGTGCAATCTGGATATGGGTCACTCATAATA
TCTCCTATGACGTCAATTCTTTTTTCAATCCAAGTGAAAAGAAAAGCTCC
CAGCTAGATGCATCGGACGTGCTATCAAGCGGAAAAGCTATTTGCTCAGG
TTATGCTAATCTGATAAATGTTTTAGCAGAATGGGTTGTGGCTCCTCAAA
AGTTGCTGTTAGTACAGTACTCGTAAATGGCACACAGGACGGCGCCATAC
TTAAAGATGCTAACGGAAATATCACACAATCAAAACCTATTGGTTCTAAT
GAAAAAGAGAGACTTGGCTCTCAGCTAGGATCAAGTAATCGATTAGGTCC
TGTTGAAAGTCTTGGTATTTTTCGAAAACGCAAGAAGAATTTGTATCAAT
CTCTGGATGTCTTTGAACAAATCGATCAACGTTCTGTCACGGTGGAAAGA
ATTCTACATGGGAACGCATTCCAAACAGTCGAGGTGCATTATGGGAAGGT
GAAATCACGCTTCCTGATTGGGTGGAACGAGTGAACGTGGTGGCACGTTT
TGAAGAAAAAACTCCTTTCTCCAGTCTTTTGGAATACAAAGTCGCTGAAA
AGGATTGGGCAATTGAAAATTGTGAAAATGAACATTCATAAATCAGCTGG
AATTAAAACTGAGCGCGTGGATGGTTGGTCTAAAGGCTACAATTATCAAT
ATGGTCAAAAGTTTGGAGACATGAGTCCGAATCATGCATGGAATGTCGTA
AAACTGAACAATGATTGGTGGCTGCTAGATTCAACATGGGGCGCTGGCTA
CGTAGACAAAGAGAAGAATTTCGTACGACAGTATAGTGAACATTATTTTC
TAACGGATCCTAAACAATTCATTTTCGATCATTGTCCGACAGACATGCAT
TGGCAACTATTGGAAGAAATGATCGCCGTTGAACGGTTCGAAAATTACGC
TCGAGTTACGAAACATTTCTTTCGCCTCAAAATGAAATTATTTTCACATC
AAAACGGAATTGTTGTATGCGAAACTGGCCGTTTACATCTTAAGTTCCGT
ATTGATAAAGATATTCCGATAAAATGTACCGGAAAATTATCGGAAGTTGA
CGGAGATGTGGATACGGATCAATACATTCATGTTTATTCGACAGAAAAGA
CGCTTCACGTTTTAGTCGATGTTCCTCGCGTTGGACAATTTGATTTGAAA
ATATTCGCACGAGAACTGAACTCAGAGCAGAGCAATTTGAATTTAGTATG
CAGGTATGCGATCACGTGTACTAATAAATTGGGACCGAGCTCAAGTTTTC
CTAGACAATTCAAAAGATGGAGTCCAGGCTTTTATTTACATTCTCCAACT
GATGGTGTTTTGTATAACGGTGAAACGTACAAGTTCCGAATTAGTTTACC
GAATGTTACGGAAATGGCAGTTTGTTTGGGTGCCATCTACTGTTTCAAGG
ACTGCTCAATCTTTAGTTCAATATTTGACTGAACCTTACGAAGCACCCCT
ATTCAAACTACGTGCAATCTGGATATGGGTCACTCATAATATCTCCTATG
ACGTCAATTCTTTTTTCAATCCAAGTGAAAAGAAAAGCTCCCAGCTAGAT
GCATCGGACGTGCTATCAAGCGGAAAAGCTATTTGCTCAGGTTATGCTAA
TCTGATAAATGTTTTAGCAGAATGGGTTGTGGCTCCTCAAAAGTTGCTGT
TAGTACAGTACTCGTAAATGGCACACAGGACGGCGCCATACTTAAAGATG
CTAACGGAAATATCACACAATCAAAACCTATTGGTTCTAATGAAAAAGAG
AGACTTGGCTCTCAGCTAGGATCAAGTAATCGATTAGGTCCTGTTGAAAG
TCTTGGTATTTTTCGAAAACGCAAGAAGAATTTGTATCAATCTCTGGATG
TCTTTGAACAAATCGATCAACGTTCTGTCACGGTGGAAAGAATTCTACAT
GGGAACGCATTCCAAACAGTCGAGGTGCATTATGGGAAGGTGAAATCACG
CTTCCTGATTGGGTGGAACGAGTGAACGTGGTGGCACGTTTTGAAGAAAA
AACTCCTTTCTCCAGTCTTTTGGAATACAAAGTCGCTGAAAAGGATTGGG
CAATTGAAAATTGTGAAAATGAACATTCATAAATCAGCTGGAATTAAAAC
TGAGCGCGTGGATGGTTGGTCTAAAGGCTACAATTATCAATATGGTCAAA
AGTTTGGAGACATGAGTCCGAATCATGCATGGAATGTCGTAAAACTGAAC
AATGATTGGTGGCTGCTAGATTCAACATGGGGCGCTGGCTACGTAGACAA
AGAGAAGAATTTCGTACGACAGTATAGTGAACATTATTTTCTAACGGATC
CTAAACAATTCATTTTCGATCATTGTCCGACAGACATGCATTGGCAACTA
TTGGAAGAAATGATCGCCGTTGAACGGTTCGAAAATTACGCTCGAGTTAC
GAAACATTTCTTTCGCCTCAAAATGAAATTATTTTCACATCAAAACGGAA
TTGTTGTATGCGAAACTGGCCGTTTACATCTTAAGTTCCGTATTGATAAA
GATATTCCGATAAAATGTACCGGAAAATTATCGGAAGTTGACGGAGATGT
GGATACGGATCAATACATTCATGTTTATTCGACAGAAAAGACGCTTCACG
TTTTAGTCGATGTTCCTCGCGTTGGACAATTTGATTTGAAAATATTCGCA
CGAGAACTGAACTCAGAGCAGAGCAATTTGAATTTAGTATGCAGGTATGC
GATCACGTGTACTAATAAATTGGGACCGAGCTCAAGTTTTCCTAGACAAT
TCAAAAGATGGAGTCCAGGCTTTTATTTACATTCTCCAACTGATGGTGTT
TTGTATAACGGTGAAACGTACAAGTTCCGAATTAGTTTACCGAATGTTAC
GGAAATGGCAGTTTGTTTGGGTGCCATCTACTGTTTCAAGGACTGCTCAA
TCTTTAGTTCAATATTTGACTGAACCTTACGAAGCACCCCTATTCAAACT
ACGTGCAATCTGGATATGGGTCACTCATAATATCTCCTATGACGTCAATT
CTTTTTTCAATCCAAGTGAAAAGAAAAGCTCCCAGCTAGATGCATCGGAC
GTGCTATCAAGCGGAAAAGCTATTTGCTCAGGTTATGCTAATCTGATAAA
TGTTTTAGCAGAATGGGTTGTGGCTCCTCAAAAGTTGCTGTTAGTACAGT
ACTCGTAAATGGCACACAGGACGGCGCCATACTTAAAGATGCTAACGGAA
ATATCACACAATCAAAACCTATTGGTTCTAATGAAAAAGAGAGACTTGGC
TCTCAGCTAGGATCAAGTAATCGATTAGGTCCTGTTGAAAGTCTTGGTAT
TTTTCGAAAACGCAAGAAGAATTTGTATCAATCTCTGGATGTCTTTGAAC
AAATCGATCAACGTTCTGTCACGGTGGAAAGAATTCTACATGGGAACGCA
TTCCAAACAGTCGAGGTGCATTATGGGAAGGTGAAATCACGCTTCCTGAT
TGGGTGGAACGAGTGAACGTGGTGGCACGTTTTGAAGAAAAAACTCCTTT
CTCCAGTCTTTTGGAATACAAAGTCGCTGAAAAGGATTGGGCAATTGAAA
ATTGTGAAAATGAACATTCATAAATCAGCTGGAATTAAAACTGAGCGCGT
GGATGGTTGGTCTAAAGGCTACAATTATCAATATGGTCAAAAGTTTGGAG
ACATGAGTCCGAATCATGCATGGAATGTCGTAAAACTGAACAATGATTGG
TGGCTGCTAGATTCAACATGGGGCGCTGGCTACGTAGACAAAGAGAAGAA
TTTCGTACGACAGTATAGTGAACATTATTTTCTAACGGATCCTAAACAAT
TCATTTTCGATCATTGTCCGACAGACATGCATTGGCAACTATTGGAAGAA
ATGATCGCCGTTGAACGGTTCGAAAATTACGCTCGAGTTACGAAACATTT
CTTTCGCCTCAAAATGAAATTATTTTCACATCAAAACGGAATTGTTGTAT
GCGAAACTGGCCGTTTACATCTTAAGTTCCGTATTGATAAAGATATTCCG
ATAAAATGTACCGGAAAATTATCGGAAGTTGACGGAGATGTGGATACGGA
TCAATACATTCATGTTTATTCGACAGAAAAGACGCTTCACGTTTTAGTCG
ATGTTCCTCGCGTTGGACAATTTGATTTGAAAATATTCGCACGAGAACTG
AACTCAGAGCAGAGCAATTTGAATTTAGTATGCAGGTATGCGATCACGTG
TACTAATAAATTGGGACCGAGCTCAAGTTTTCCTAGACAATTCAAAAGAT
GGAGTCCAGGCTTTTATTTACATTCTCCAACTGATGGTGTTTTGTATAAC
GGTGAAACGTACAAGTTCCGAATTAGTTTACCGAATGTTACGGAAATGGC
AGTTTGTTTGGGTGCCATCTACTGTTTCAAGGACTGCTCAATCTTTAGTT
CAATATTTGACTGAACCTTACGAAGCACCCCTATTCAAACTACGTGCAAT
CTGGATATGGGTCACTCATAATATCTCCTATGACGTCAATTCTTTTTTCA
ATCCAAGTGAAAAGAAAAGCTCCCAGCTAGATGCATCGGACGTGCTATCA
AGCGGAAAAGCTATTTGCTCAGGTTATGCTAATCTGATAAATGTTTTAGC
AGAATGGGTTGTGGCTCCTCAAAAGTTGCTGTTAGTACAGTACTCGTAAA
TGGCACACAGGACGGCGCCATACTTAAAGATGCTAACGGAAATATCACAC
AATCAAAACCTATTGGTTCTAATGAAAAAGAGAGACTTGGCTCTCAGCTA
GGATCAAGTAATCGATTAGGTCCTGTTGAAAGTCTTGGTATTTTTCGAAA
ACGCAAGAAGAATTTGTATCAATCTCTGGATGTCTTTGAACAAATCGATC
AACGTTCTGTCACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050084-exon-scaffold_167-1575043694:957797..957819 | TCONS_00050084-exon-scaffold_167-1575043694:957797..957819 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1575043694:954115..954428 | TCONS_00050084-exon-scaffold_167-1575043694:954115..954428 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1575043694:952020..952261 | TCONS_00050084-exon-scaffold_167-1575043694:952020..952261 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1575043694:950204..950991 | TCONS_00050084-exon-scaffold_167-1575043694:950204..950991 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1575043694:947391..948575 | TCONS_00050084-exon-scaffold_167-1575043694:947391..948575 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1510915933:957797..957819 | TCONS_00050084-exon-scaffold_167-1510915933:957797..957819 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1510915933:954115..954428 | TCONS_00050084-exon-scaffold_167-1510915933:954115..954428 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1510915933:952020..952261 | TCONS_00050084-exon-scaffold_167-1510915933:952020..952261 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1510915933:950204..950991 | TCONS_00050084-exon-scaffold_167-1510915933:950204..950991 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1510915933:947391..948575 | TCONS_00050084-exon-scaffold_167-1510915933:947391..948575 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1491911889:957797..957819 | TCONS_00050084-exon-scaffold_167-1491911889:957797..957819 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1491911889:954115..954428 | TCONS_00050084-exon-scaffold_167-1491911889:954115..954428 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1491911889:952020..952261 | TCONS_00050084-exon-scaffold_167-1491911889:952020..952261 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1491911889:950204..950991 | TCONS_00050084-exon-scaffold_167-1491911889:950204..950991 | Clytia hemisphaerica | exon |
| TCONS_00050084-exon-scaffold_167-1491911889:947391..948575 | TCONS_00050084-exon-scaffold_167-1491911889:947391..948575 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:947391..957819 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002931 | Transglutaminase-like |
Blast
BLAST of TCONS_00050084 vs. Swiss-Prot (Human)
Match: KY (Kyphoscoliosis peptidase OS=Homo sapiens GN=KY PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.254e-35 Identity = 83/220 (37.73%), Postives = 115/220 (52.27%), Query Frame = 2
Query: 269 RKRKKNLYQSLDVFEQIDQRSVTVPSTVSRTAQSLVQYLTEPYEAPLFKLRAIWIWVTHNISYDVNSFFNPSEKKSSQLDASDVLSSGKAICSGYANLINVLAESAGIKTERVDGWSKGYNYQYGQKF-GDMSPNHAWNVVKLNNDWWLLDSTWGAGYVDK-EKNFVRQYSEHYFLTDPKQFIFDHCPTDMHWQLLEEMIAVERFENYARVTKHFFRLKM 922
R K++ L FE++D + V T LV L + L ++RAIWIW+ H+I YD+ + EK +D+L + K C GYA L + AG++ V G+SKG+ YQ GQ F G+ +HAWN V L W L+DSTWG+G VD F Y+E YFLT P FI DH P + +WQLL+ ++ +FEN F+ M
Sbjct: 139 RSSLKSMSLDLQQFEKLDIYASQV--TAKSGLDELVSDLLQEAHTDLERVRAIWIWICHHIEYDIAA---AQEKDRQAFKPTDILRTQKTNCDGYAGLFERMCRLAGVQCMTVPGYSKGFGYQTGQSFSGEF--DHAWNAVYLEGRWHLVDSTWGSGLVDTITSKFTFLYNEFYFLTHPALFIEDHFPDNKNWQLLKPPQSLRQFENNMYHKSEFYNKGM 351
The following BLAST results are available for this feature:
|
