TCONS_00050136 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050136
Unique NameTCONS_00050136
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5595

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050136 ID=TCONS_00050136|Name=TCONS_00050136|organism=Clytia hemisphaerica|type=transcript|length=5595bp
AAAAACctgtatttcttttttctatttattttatattatttattttcagg
CTAACATCATTCTCgacaaggaaaagaaaaaaccaTCCAAACCGACCAAA
ccgaaaacaaaaaaacaaaagttcaTGGAGCTGCTCCGTGACGATGAAGT
TGATCATGAGAAAACTGATTTTGATAAAACATGCACTTCACCACCAAAAC
GATACGCTCCAAatttttctaatatttctaGGACGCACAAGACACAACAT
ACAACATCTAATACACTAAAACCATCCACTTCAACCCAATCAAAACCCCC
GTCAATCAAAAAGCCGAAAACGAGCAAAGAATCTCCTACATCGACCACCG
AAAGCGAAGACTCTGATTCCACTGAATctgaaattgaatttgaagaGGAG
CACGACTTTGGAGAGTTCAAGTCATTGAGCGACAGGTCGTTAACGCTGAA
CTTCACCCACTTATATGAAGAATTCTNGAGCTAAGAATCTCCTCCATCGA
CCACCGAAAGCGAAGACTCTGATTCCACTAAATCTGAAATTGAATTTAAA
GAGGAGCACGACCTTGGAGAGTTCAAGTCATTGAGCGACAGGTCGTTAAC
GCTGAACTTCAATCCAAAATTTCATTCTGGGCGATACAAAAAGAAACAGG
TCTGGGACATGATACAGAAAAAACTTAAGTCGACAATAAAACCTGGAAAT
CCAGTACCCACTGCCGCCCAGTGCAAATACAAATGGCGTGCAATGAGTAA
AGCATATAACaagtaaaatatttatttatattatttCAACTACGATCCTG
GATCCTACGGTCCTggtatttgtgacatttttgttgAGGTTTACTCTTAG
CTCCGTAGagtgtgcaaaatttgaggtttaCAACTAAAATTTTGCTATGA
TTAGGCTGAGTAAATTTCCTTTCCACCGATATAAGTATATTTTTTTGAGG
TTTACACAAACTTGAGATATCCATTTTTGAAGTAGGAGCAAAATATGAGG
TTGACATAGAAGatgaagattttatttttagggTTCAGTTGTTGCAGTTG
CTGCTAGCGAGAAGTCTGATGACATTGTCTGGTTCATCAAGGTTGTTGGA
AGTGCAGTAACTGATTACAATATCACTGATAACTATGGAAATACAATTCC
TGCTGGTATGGAACATCTCCAGGGACATTTTCTTGAACGtgaatttacaa
agaaaaactGTCAGTTGTTTAAACTTTCTAAAACAATAACCTACTTTTAT
CGAGAGATTGTTGCCTATCCATTTGTTCCATTTCAGGAGACAAAGAAAGG
CTTTCGATTGGGAAAAAAAGACTTGACAGATATCTTATTAAGATATAAAA
GGTTCAGCTTCCCGAAACCACCGAAGAAGAAACGTTTGCTATGCTTGCTG
AAGACAACATTGATCGCCTCGAAGAAACACTATCTGGTACGTAAGAAATC
AAGCCAAATAAATACAGTAATAATCTATTCGAATAATTAGCTGGATTAGA
AGAAGGCCTAAAAAATAGTTATGGTAGACCTAACCTTTGTTAATAAACTC
AATTTCAGGTGAAGGAACAACGCACAAAGTCAATTCCATAATCATCCAGC
CTGTTAACAAGAACAAAACAGTTGAGATGGTTGGTCGCAGAGGACAGTTC
CCGTCACAATCAGTACACACGAAGCGAAGGTATTAACTTCATATAATTGG
TCCTTGAAAAATTGCTAATTTGACAGCGAATTTCGCTTCcattaaaactt
atttttaggtggataatatttttctcttaatttctttcagaatttttcga
AATCCTCCAACGTTGGTAAAGGATTATGTCCTTGGTAAAAGGATAGGACC
AGAGAAAGCCCCTGCTGTCGAGAAAGATTCGTTTGCTGACATTCTTCGAG
CTGATCAAAGTCACCTTTACAACGCATGGGTCGCTTTAAGAATCAGTCAA
CCAATTCTGCAGCACGTACCAAGCTGGACAGGTTTCTTTATCAAGATCCG
ACAAGACGTTCCCATCAGTCCAAGCAGTGTTGGTTATCTTGATTGTTTGG
ACGCCCCCGCTACTGAAATGCCGACGATCTATCCCATGCTGGAGCGGGCT
CTTCGCATCAAAGACCAACTCAAGGTCAGATTGATCGTTTGTGTTTATGA
TCAGGCCATCTATGCAAAAGCGTATCAGATAAAGTGTAAGGAGCCGGAGA
AGTTTAAGAGCGTCTTCCTGATGATGGGCACCTTCCATATCATCATGACC
CTTCTTGCCGTCATGGCTGCTCGATTCAAAGACGCTGGCCTCAAGGATTT
GGTGATCCAAAGTGTTCTCATCGCTGAAGGTTCTGTTGACACCATGTTTT
CCGGATCACGTACCTACAAACGAGCAGTCAGGGCGTACAAAATCCTGTAC
GAGTCATTTTCGCGTCTGCTTTTGGAAAAGTTTGCGATCAAGTATCCAGC
AACTGTCAAGGTATTACATGATAACATTGGACCCGCTGCCCTTGACGACT
TCAATGGTGTGGTGACGTCAAAAGAAATGCAACAGTATTCCAATGACCTG
ACTTTGTTGAGCCTAGCAGAACAAGGAAAACTTGAAAAGTTTTGGTTGTC
ATTTCTGGACATGTGTGAGCTTCTTTTCGACATTATCTTTGCAACTCGCA
GTGGTCATTGGGCATTATACTTGATTTCGATACGACAATCTCTACCTTGG
TTTTTCGCCTACGATCGACAGAACTACTCTCGATATTTGACAGCCCACTA
CCGAGAACTAGTCCATCTTGAAAGCAACTTTCCTGATGTGTACGTAGATT
TTGAAGGTGGTAACTTCTCCGTTCAACTATCACCTGACAACCTCTTCGGA
AGAATGGAAGCTGACAAAGTGATTGAAACAACAATCAACAAGGACACAAA
GACACCAGGTGGAACAACAGGTACTTAAGCTTACATAATTGTTATCAGTC
AAACTTCGTTTATCATTATCTTCTTAAATAATCTGCGAACTTTAAATAGT
TAAGTCACATCTTTTGAGACAACAGTAATGTGATTTTAATTCTACTACTT
TAGCTTTTGTTATTTCCTTTAAGGGTTCAGCACAAACCACGGAGCCGTTC
AAAGATGGGTACTTACCGCAGCGTACAGAGCCGAAGTCCGCAAACACATG
CAAGAATTTCTCTCTATGTCAAAGGATTCGAAGCATCCCGATTTAAGCCC
TGCACGAATTAGACGTGACCAAAAGGATGTCAAGACTGTTAAAGACACGG
TCGACTCCATGTTTGTGAATCCTTTCGATGAAGTGGATTTGATAAGCATT
ACATCAGGTGTTGCACCAACAACAGAAGTCTGTGACCAACTAATGGATGC
AGAGGTGTTAGGTGAAAACGCACTCGTGAAGTTTCAGCAAGAAAAGTTGG
AAAGCAATGAAGTTGACTTCTTTGCTACCTTGACGAAACTAAACCTGGGC
ACCTTTACAAAGCTGCTGAAGAAAACTGTCAAAATGATGAATGGCAAAGA
AGCTCAGTTTTCAGCACAGAGCAACATATTTGGGAAGATAGCCCTGATCC
AACAGTTTCGCACCCTCAATCTTCGAGAGGTTTTCTGTTTTCCTCTTGGT
CCCGTTCCATGGTCCTTGGCTGAGAGTAGCCGAGCactaaacaaaacaac
aaagtcATCACTGATGCGCCATTTGGAAAAAGACGTCTCTCTTcaacaaa
atgtcaaaaaaccgttTGCTGCAGTTATCGATGGTATGGCATTGGCGAGG
AAGACTAAACCAACTGGACACACCTATGACAGCTACGCCGACCATTTATT
AACAACCGCAATCGCAACATCGGCAAATGCTTCCAGAATCGATATCGTCT
TCGATGTTTATCGTGAGCAATCCATTAAAAATGCAGAACGAGTAAACCAT
GAGTCTGGTAAATTAGAGGTCAAGAGGATCATTGGTTGTCAAAAGGTGAA
GCAATTCTCGTCACTTCTTTCAAACGGAGCAAATAAGATGACCCTCATTC
GGTTTCTTGCTTCGAGATGGCAAAAGAAACACACTTGCATTGGGAACACT
TAAGTTTATGTGGCATATGAAAAAATCTGTGTTAAACTCGGTGGTACTGA
AGACCCAACATTAGCTTGCAACCACGAGGAGGTAGACACGCGCCTGGTCT
TTCACACGaaacaaatatcaaaaagaTCTTCCAAGAAAATAGTCATCCAT
ACACCTGATACTGATGTTCTATTAATTGCTCTTGGTCTTGCAACTGGAAT
TGAAGCTGAGATTCACATGAAAACTGGCGTCAAAAGTAAAACCAGGATAA
TCAGTCTAAAAGGTATCAAGGAATCTCTTAAGACAAGATACGACGTCAAA
GACGTAGAAAGGGTTTCGAGAGCACTCCTAGGTCTTCATGGATTTATTAC
TGGGTGCGATACGATCAGCTCCTTTGCTGGCAAGGGCAAAGTGAAACCTT
TAAAAACGATGATGAATGACGATCAATACATCAACCTATTTGCTACTTTT
GGAGATGCACCAGAGTTAACCGAAGCACAGTTCAATACCATCCAAAGTTT
TGTTTGCGATATGTATGGCCACAAAGACATGAACACAAACAACGTTCGTT
ACAAAATGTACGCTGCAAAACATGGTCATCTCGACCCCAAAATGATCCCA
CCATGCGCTGACAGCCTAAGGCAACACAGTCTACGTGCTTGCTATCAAGT
TTACATATGGAGAAACTCGTTGCAAAGTCATATCATCCCATCGCCTGTTG
ATTTTGGTTGGGACCAGAATGACGAAGGTGATCTCACTATTTCGTGGAAC
AAGGTGAACCCGGCCGGCTCCAGATGAAATTCTGGAAATGATGTTTTGCA
CGTGTTTAAAGAAGTGTGTCCGTGGATCGTGCCCTTGTGTGGATAACTCC
CTCAAATGTACAGATGCTTGCACCAACCATGAATGTGACAACTTCCAATC
GAATGAGGAACCAGCAGAAGAATATGAAATTGATTACGAGGACGATAATG
ATGAATGTGGGTATGAAACTGATGAGAGTGACGATGAGGAAAGTGACAGG
AGGAAAGATCTCTTTTGTTGAAATTGTGCTGGtaaccaatttttatttta
tttgctaATTATACTAGTGCTAGAAACTATTTTTACGAtattttaataac
attttaatcattcaaattggtctcaaaccagctcAAACACTTAATATGAC
CAAATCGGTGAAAGGAAAGTTGTCGGCCATTTTCGGCCTCTCGGGGCCAG
TTGAAGGTCCCCGAGGcccctttaatttttttttcactttttatgaTTCC
ATTCTATTGAAATGAAGTCCTTCTCAAAATTTGAAGCTAATAAATCAATT
GCATCGAGTCTTTGTCAGATTTTACCAAAAGTAGcgaaaaaagcaaattt
ttgaaatttctagtTCTATCTTCCCCGCCCTACTTTTTTGAGAGGCCAAC
TTGTCATCTTGTacattattttatgttttagtACCCTATTGTGaactttt
ttaaagtattttcagTATCATTCATTAATTTTATATGGCTATACCCCCCA
AGCATCGATCAAGacacaaaaatttcattttctgacCCAAGTCGG
Run BLAST on NCBI

protein sequence of TCONS_00050136-protein

>TCONS_00050136-protein ID=TCONS_00050136-protein|Name=TCONS_00050136-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
MQEFLSMSKDSKHPDLSPARIRRDQKDVKTVKDTVDSMFVNPFDEVDLIS
ITSGVAPTTEVCDQLMDAEVLGENALVKFQQEKLESNEVDFFATLTKLNL
GTFTKLLKKTVKMMNGKEAQFSAQSNIFGKIALIQQFRTLNLREVFCFPL
GPVPWSLAESSRALNKTTKSSLMRHLEKDVSLQQNVKKPFAAVIDGMALA
RKTKPTGHTYDSYADHLLTTAIATSANASRIDIVFDVYREQSIKNAERVN
HESGKLEVKRIIGCQKVKQFSSLLSNGANKMTLIRFLASRWQKKHTCIGN
T
Run BLAST on NCBI

transcript from alignment at scaffold_167:31223..36817

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050136 ID=TCONS_00050136|Name=TCONS_00050136|organism=Clytia hemisphaerica|type=transcript|length=5595bp|location=Sequence derived from alignment at scaffold_167:31223..36817 (Clytia hemisphaerica)
CCGACTTGGgtcagaaaatgaaatttttgtgtCTTGATCGATGCTTGGGG GGTATAGCCATATAAAATTAATGAATGATActgaaaatactttaaaaaag ttCACAATAGGGTactaaaacataaaataatgtACAAGATGACAAGTTGG CCTCTCAAAAAAGTAGGGCGGGGAAGATAGAactagaaatttcaaaaatt tgcttttttcgCTACTTTTGGTAAAATCTGACAAAGACTCGATGCAATTG ATTTATTAGCTTCAAATTTTGAGAAGGACTTCATTTCAATAGAATGGAAt cataaaaagtgaaaaaaaaattaaaggggCCTCGGGGACCTTCAACTGGC CCCGAGAGGCCGAAAATGGCCGACAACTTTCCTTTCACCGATTTGGTCAT ATTAAGTGTTTgagctggtttgagaccaatttgaatgattaaaatgttat taaaataTCGTAAAAATAGTTTCTAGCACTAGTATAATtagcaaataaaa taaaaattggttaCCAGCACAATTTCAACAAAAGAGATCTTTCCTCCTGT CACTTTCCTCATCGTCACTCTCATCAGTTTCATACCCACATTCATCATTA TCGTCCTCGTAATCAATTTCATATTCTTCTGCTGGTTCCTCATTCGATTG GAAGTTGTCACATTCATGGTTGGTGCAAGCATCTGTACATTTGAGGGAGT TATCCACACAAGGGCACGATCCACGGACACACTTCTTTAAACACGTGCAA AACATCATTTCCAGAATTTCATCTGGAGCCGGCCGGGTTCACCTTGTTCC ACGAAATAGTGAGATCACCTTCGTCATTCTGGTCCCAACCAAAATCAACA GGCGATGGGATGATATGACTTTGCAACGAGTTTCTCCATATGTAAACTTG ATAGCAAGCACGTAGACTGTGTTGCCTTAGGCTGTCAGCGCATGGTGGGA TCATTTTGGGGTCGAGATGACCATGTTTTGCAGCGTACATTTTGTAACGA ACGTTGTTTGTGTTCATGTCTTTGTGGCCATACATATCGCAAACAAAACT TTGGATGGTATTGAACTGTGCTTCGGTTAACTCTGGTGCATCTCCAAAAG TAGCAAATAGGTTGATGTATTGATCGTCATTCATCATCGTTTTTAAAGGT TTCACTTTGCCCTTGCCAGCAAAGGAGCTGATCGTATCGCACCCAGTAAT AAATCCATGAAGACCTAGGAGTGCTCTCGAAACCCTTTCTACGTCTTTGA CGTCGTATCTTGTCTTAAGAGATTCCTTGATACCTTTTAGACTGATTATC CTGGTTTTACTTTTGACGCCAGTTTTCATGTGAATCTCAGCTTCAATTCC AGTTGCAAGACCAAGAGCAATTAATAGAACATCAGTATCAGGTGTATGGA TGACTATTTTCTTGGAAGAtctttttgatatttgtttCGTGTGAAAGACC AGGCGCGTGTCTACCTCCTCGTGGTTGCAAGCTAATGTTGGGTCTTCAGT ACCACCGAGTTTAACACAGATTTTTTCATATGCCACATAAACTTAAGTGT TCCCAATGCAAGTGTGTTTCTTTTGCCATCTCGAAGCAAGAAACCGAATG AGGGTCATCTTATTTGCTCCGTTTGAAAGAAGTGACGAGAATTGCTTCAC CTTTTGACAACCAATGATCCTCTTGACCTCTAATTTACCAGACTCATGGT TTACTCGTTCTGCATTTTTAATGGATTGCTCACGATAAACATCGAAGACG ATATCGATTCTGGAAGCATTTGCCGATGTTGCGATTGCGGTTGTTAATAA ATGGTCGGCGTAGCTGTCATAGGTGTGTCCAGTTGGTTTAGTCTTCCTCG CCAATGCCATACCATCGATAACTGCAGCAaacggttttttgacattttgt tgAAGAGAGACGTCTTTTTCCAAATGGCGCATCAGTGATgactttgttgt tttgtttagtGCTCGGCTACTCTCAGCCAAGGACCATGGAACGGGACCAA GAGGAAAACAGAAAACCTCTCGAAGATTGAGGGTGCGAAACTGTTGGATC AGGGCTATCTTCCCAAATATGTTGCTCTGTGCTGAAAACTGAGCTTCTTT GCCATTCATCATTTTGACAGTTTTCTTCAGCAGCTTTGTAAAGGTGCCCA GGTTTAGTTTCGTCAAGGTAGCAAAGAAGTCAACTTCATTGCTTTCCAAC TTTTCTTGCTGAAACTTCACGAGTGCGTTTTCACCTAACACCTCTGCATC CATTAGTTGGTCACAGACTTCTGTTGTTGGTGCAACACCTGATGTAATGC TTATCAAATCCACTTCATCGAAAGGATTCACAAACATGGAGTCGACCGTG TCTTTAACAGTCTTGACATCCTTTTGGTCACGTCTAATTCGTGCAGGGCT TAAATCGGGATGCTTCGAATCCTTTGACATAGAGAGAAATTCTTGCATGT GTTTGCGGACTTCGGCTCTGTACGCTGCGGTAAGTACCCATCTTTGAACG GCTCCGTGGTTTGTGCTGAACCCTTAAAGGAAATAACAAAAGCTAAAGTA GTAGAATTAAAATCACATTACTGTTGTCTCAAAAGATGTGACTTAACTAT TTAAAGTTCGCAGATTATTTAAGAAGATAATGATAAACGAAGTTTGACTG ATAACAATTATGTAAGCTTAAGTACCTGTTGTTCCACCTGGTGTCTTTGT GTCCTTGTTGATTGTTGTTTCAATCACTTTGTCAGCTTCCATTCTTCCGA AGAGGTTGTCAGGTGATAGTTGAACGGAGAAGTTACCACCTTCAAAATCT ACGTACACATCAGGAAAGTTGCTTTCAAGATGGACTAGTTCTCGGTAGTG GGCTGTCAAATATCGAGAGTAGTTCTGTCGATCGTAGGCGAAAAACCAAG GTAGAGATTGTCGTATCGAAATCAAGTATAATGCCCAATGACCACTGCGA GTTGCAAAGATAATGTCGAAAAGAAGCTCACACATGTCCAGAAATGACAA CCAAAACTTTTCAAGTTTTCCTTGTTCTGCTAGGCTCAACAAAGTCAGGT CATTGGAATACTGTTGCATTTCTTTTGACGTCACCACACCATTGAAGTCG TCAAGGGCAGCGGGTCCAATGTTATCATGTAATACCTTGACAGTTGCTGG ATACTTGATCGCAAACTTTTCCAAAAGCAGACGCGAAAATGACTCGTACA GGATTTTGTACGCCCTGACTGCTCGTTTGTAGGTACGTGATCCGGAAAAC ATGGTGTCAACAGAACCTTCAGCGATGAGAACACTTTGGATCACCAAATC CTTGAGGCCAGCGTCTTTGAATCGAGCAGCCATGACGGCAAGAAGGGTCA TGATGATATGGAAGGTGCCCATCATCAGGAAGACGCTCTTAAACTTCTCC GGCTCCTTACACTTTATCTGATACGCTTTTGCATAGATGGCCTGATCATA AACACAAACGATCAATCTGACCTTGAGTTGGTCTTTGATGCGAAGAGCCC GCTCCAGCATGGGATAGATCGTCGGCATTTCAGTAGCGGGGGCGTCCAAA CAATCAAGATAACCAACACTGCTTGGACTGATGGGAACGTCTTGTCGGAT CTTGATAAAGAAACCTGTCCAGCTTGGTACGTGCTGCAGAATTGGTTGAC TGATTCTTAAAGCGACCCATGCGTTGTAAAGGTGACTTTGATCAGCTCGA AGAATGTCAGCAAACGAATCTTTCTCGACAGCAGGGGCTTTCTCTGGTCC TATCCTTTTACCAAGGACATAATCCTTTACCAACGTTGGAGGATTtcgaa aaattctgaaagaaattaagagaaaaatattatccacctaaaaataagtt ttaatgGAAGCGAAATTCGCTGTCAAATTAGCAATTTTTCAAGGACCAAT TATATGAAGTTAATACCTTCGCTTCGTGTGTACTGATTGTGACGGGAACT GTCCTCTGCGACCAACCATCTCAACTGTTTTGTTCTTGTTAACAGGCTGG ATGATTATGGAATTGACTTTGTGCGTTGTTCCTTCACCTGAAATTGAGTT TATTAACAAAGGTTAGGTCTACCATAACTATTTTTTAGGCCTTCTTCTAA TCCAGCTAATTATTCGAATAGATTATTACTGTATTTATTTGGCTTGATTT CTTACGTACCAGATAGTGTTTCTTCGAGGCGATCAATGTTGTCTTCAGCA AGCATAGCAAACGTTTCTTCTTCGGTGGTTTCGGGAAGCTGAACCTTTTA TATCTTAATAAGATATCTGTCAAGTCTTTTTTTCCCAATCGAAAGCCTTT CTTTGTCTCCTGAAATGGAACAAATGGATAGGCAACAATCTCTCGATAAA AGTAGGTTATTGTTTTAGAAAGTTTAAACAACTGACagtttttctttgta aattcaCGTTCAAGAAAATGTCCCTGGAGATGTTCCATACCAGCAGGAAT TGTATTTCCATAGTTATCAGTGATATTGTAATCAGTTACTGCACTTCCAA CAACCTTGATGAACCAGACAATGTCATCAGACTTCTCGCTAGCAGCAACT GCAACAACTGAAccctaaaaataaaatcttcatCTTCTATGTCAACCTCA TATTTTGCTCCTACTTCAAAAATGGATATCTCAAGTTTGTGTAAACCTCA AAAAAATATACTTATATCGGTGGAAAGGAAATTTACTCAGCCTAATCATA GCAAAATTTTAGTTGtaaacctcaaattttgcacactCTACGGAGCTAAG AGTAAACCTcaacaaaaatgtcacaaataccAGGACCGTAGGATCCAGGA TCGTAGTTGaaataatataaataaatattttacttGTTATATGCTTTACT CATTGCACGCCATTTGTATTTGCACTGGGCGGCAGTGGGTACTGGATTTC CAGGTTTTATTGTCGACTTAAGTTTTTTCTGTATCATGTCCCAGACCTGT TTCTTTTTGTATCGCCCAGAATGAAATTTTGGATTGAAGTTCAGCGTTAA CGACCTGTCGCTCAATGACTTGAACTCTCCAAGGTCGTGCTCCTCTTTAA ATTCAATTTCAGATTTAGTGGAATCAGAGTCTTCGCTTTCGGTGGTCGAT GGAGGAGATTCTTAGCTCNAGAATTCTTCATATAAGTGGGTGAAGTTCAG CGTTAACGACCTGTCGCTCAATGACTTGAACTCTCCAAAGTCGTGCTCCt cttcaaattcaatttcagATTCAGTGGAATCAGAGTCTTCGCTTTCGGTG GTCGATGTAGGAGATTCTTTGCTCGTTTTCGGCTTTTTGATTGACGGGGG TTTTGATTGGGTTGAAGTGGATGGTTTTAGTGTATTAGATGTTGTATGTT GTGTCTTGTGCGTCCtagaaatattagaaaaatTTGGAGCGTATCGTTTT GGTGGTGAAGTGCATGTTTTATCAAAATCAGTTTTCTCATGATCAACTTC ATCGTCACGGAGCAGCTCCAtgaacttttgtttttttgttttcggTTTGG TCGGTTTGGAtggttttttcttttccttgtcGAGAATGATGTTAGcctga aaataaataatataaaataaatagaaaaaagaaatacagGTTTTT

Coding sequence (CDS) from alignment at scaffold_167:31223..36817

>TCONS_00050136 ID=TCONS_00050136|Name=TCONS_00050136|organism=Clytia hemisphaerica|type=CDS|length=906bp|location=Sequence derived from alignment at scaffold_167:31223..36817 (Clytia hemisphaerica)
TTAAGTGTTCCCAATGCAAGTGTGTTTCTTTTGCCATCTCGAAGCAAGAA
ACCGAATGAGGGTCATCTTATTTGCTCCGTTTGAAAGAAGTGACGAGAAT
TGCTTCACCTTTTGACAACCAATGATCCTCTTGACCTCTAATTTACCAGA
CTCATGGTTTACTCGTTCTGCATTTTTAATGGATTGCTCACGATAAACAT
CGAAGACGATATCGATTCTGGAAGCATTTGCCGATGTTGCGATTGCGGTT
GTTAATAAATGGTCGGCGTAGCTGTCATAGGTGTGTCCAGTTGGTTTAGT
CTTCCTCGCCAATGCCATACCATCGATAACTGCAGCAaacggttttttga
cattttgttgAAGAGAGACGTCTTTTTCCAAATGGCGCATCAGTGATgac
tttgttgttttgtttagtGCTCGGCTACTCTCAGCCAAGGACCATGGAAC
GGGACCAAGAGGAAAACAGAAAACCTCTCGAAGATTGAGGGTGCGAAACT
GTTGGATCAGGGCTATCTTCCCAAATATGTTGCTCTGTGCTGAAAACTGA
GCTTCTTTGCCATTCATCATTTTGACAGTTTTCTTCAGCAGCTTTGTAAA
GGTGCCCAGGTTTAGTTTCGTCAAGGTAGCAAAGAAGTCAACTTCATTGC
TTTCCAACTTTTCTTGCTGAAACTTCACGAGTGCGTTTTCACCTAACACC
TCTGCATCCATTAGTTGGTCACAGACTTCTGTTGTTGGTGCAACACCTGA
TGTAATGCTTATCAAATCCACTTCATCGAAAGGATTCACAAACATGGAGT
CGACCGTGTCTTTAACAGTCTTGACATCCTTTTGGTCACGTCTAATTCGT
GCAGGGCTTAAATCGGGATGCTTCGAATCCTTTGACATAGAGAGAAATTC
TTGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031741XLOC_031741Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050136-proteinTCONS_00050136-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050136-exon-scaffold_167-1491911889:31223..36817TCONS_00050136-exon-scaffold_167-1491911889:31223..36817Clytia hemisphaericaexon
TCONS_00050136-exon-scaffold_167-1510915933:31223..36817TCONS_00050136-exon-scaffold_167-1510915933:31223..36817Clytia hemisphaericaexon
TCONS_00050136-exon-scaffold_167-1575043694:31223..36817TCONS_00050136-exon-scaffold_167-1575043694:31223..36817Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:31223..36817 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0333623 0.0385404 0.231203 0.233493 0.268518 0.213458 0.154629 0.225987 0.131546 0.276029 0.0886726 0.128334 0.0481891 0.0272972 0.0149613 0.0200698 0.00988972 0.0354782 0.0350108 0.0222669 0.0318436 0.0279579 0.0151051 0.0137327 0.153099 0.165038 0.0180643 0.0674753 0.0292444 0.0148977
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050136 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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