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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050174 ID=TCONS_00050174|Name=TCONS_00050174|organism=Clytia hemisphaerica|type=transcript|length=922bp
gttttccaattttttttgctcgcaAACGACACGTTGTGTTGAGTTcgtaa
acatttttattttgtgatcattttgaaatttaatcaTATTCATTTGATCA
CTCGAAGTGTGTAGACTCaaatcttgttttgattttgttgtagCTACACA
CAAATCTGTGTAAAAAGAGCTAAAAATATGAGACAATTAAAAGGAAAAGT
CAgcaaagaaaatggaaaaatgaagagAGATCGAAAGAAGTCATTCAAAG
AAGGACAAAATAAAGCTATGACTGTCGCTGTTCCAGTTCTTTTGGGAATT
GTACTTATGATCATTGTTTTTGTGGTGATGAAAACAAACAGCAAGGCAAA
GATGGAAGtgtaaaagaaattgaaagaacTTTATTAACAATTAATGGAAC
TGTTAGCACAATAacgaaaacaaacaaacacatcAACACAGAGAAAGTTT
TATTTATCATATTTTATCTTCTTCATCTATACCTTATACATATAATTCTT
TgtaaagaaaaactgaaaactttaaaatactTTCGAATTTATCAGTGAAA
ATTTATGATCTTTGTGAAGTAATCTTTTTGTGATAAATCATTATGCTGCC
TTTCTATACATATCTTGTAACATCAGTTTAGTCTACGATATTTCAACTAG
AATTTAAAGCATTTTTAGTTTGATTTTTACAGGGAAAGAACAAATATATA
ATTTTAAGCTTGTTTAAAAGCTACAAATCATAACGaaacaatttaaattt
ttcatattttttcagtACGAAAAAGTGCACACAAAACGAAACTTAGATAA
TCGGTTCATTAGAAGGAAGTTcattaataaaaaaagttaGCATTGCAATT
ACACTTAATCGATCCGATCACTTCcttgtgtccatcattaaatATAATAT
AACGATTGACAATCAATCCATT Run BLAST on NCBI transcript from alignment at scaffold_167:940808..941729 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050174 ID=TCONS_00050174|Name=TCONS_00050174|organism=Clytia hemisphaerica|type=transcript|length=922bp|location=Sequence derived from alignment at scaffold_167:940808..941729 (Clytia hemisphaerica)
AATGGATTGATTGTCAATCGTTATATTATatttaatgatggacacaagGA
AGTGATCGGATCGATTAAGTGTAATTGCAATGCtaactttttttattaat
gAACTTCCTTCTAATGAACCGATTATCTAAGTTTCGTTTTGTGTGCACTT
TTTCGTactgaaaaaatatgaaaaatttaaattgtttCGTTATGATTTGT
AGCTTTTAAACAAGCTTAAAATTATATATTTGTTCTTTCCCTGTAAAAAT
CAAACTAAAAATGCTTTAAATTCTAGTTGAAATATCGTAGACTAAACTGA
TGTTACAAGATATGTATAGAAAGGCAGCATAATGATTTATCACAAAAAGA
TTACTTCACAAAGATCATAAATTTTCACTGATAAATTCGAAagtatttta
aagttttcagtttttctttacAAAGAATTATATGTATAAGGTATAGATGA
AGAAGATAAAATATGATAAATAAAACTTTCTCTGTGTTgatgtgtttgtt
tgttttcgtTATTGTGCTAACAGTTCCATTAATTGTTAATAAAgttcttt
caatttcttttacaCTTCCATCTTTGCCTTGCTGTTTGTTTTCATCACCA
CAAAAACAATGATCATAAGTACAATTCCCAAAAGAACTGGAACAGCGACA
GTCATAGCTTTATTTTGTCCTTCTTTGAATGACTTCTTTCGATCTctctt
catttttccattttctttgcTGACTTTTCCTTTTAATTGTCTCATATTTT
TAGCTCTTTTTACACAGATTTGTGTGTAGctacaacaaaatcaaaacaag
atttGAGTCTACACACTTCGAGTGATCAAATGAATAtgattaaatttcaa
aatgatcacaaaataaaaatgtttacgAACTCAACACAACGTGTCGTTtg
cgagcaaaaaaaattggaaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050174-exon-scaffold_167-1491911889:940808..941729 | TCONS_00050174-exon-scaffold_167-1491911889:940808..941729 | Clytia hemisphaerica | exon |
| TCONS_00050174-exon-scaffold_167-1510915933:940808..941729 | TCONS_00050174-exon-scaffold_167-1510915933:940808..941729 | Clytia hemisphaerica | exon |
| TCONS_00050174-exon-scaffold_167-1575043694:940808..941729 | TCONS_00050174-exon-scaffold_167-1575043694:940808..941729 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:940808..941729 . |
Blast
The following BLAST results are available for this feature:
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