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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050177 ID=TCONS_00050177|Name=TCONS_00050177|organism=Clytia hemisphaerica|type=transcript|length=1061bp
CACTCATAAGATTGTTATGGAATTTCCCAATAGGCATGCGATTTTAAGAC
ATTTTTCCCCGAGTCTAGTGTAGGCGTGTATAAAAAAACCGAATTTTCGA
AACATTTAAGAGGTTTTTATTGAACGACGTAGGCTACTCATTGAGCAATG
TACGAAGAAAACAACCCTCcctcaaaagaagaaaaaataaagaacataCA
AAGGGTGGGTTGAAGATTTGAAGTGAACGAAAACAACTCATTTCGTTTGA
TTATGTATATAAGTATAGTATCTTTACCGTGATCCAGCTTTTGAGAAATA
AGgaattttgaaagtcaaagctTTATCAGTTTGCATACAAACGTTATTCT
AAAGTCCATTTAACGTTCATAACGGTCCAATATTACGACGTTTGATGACT
GTTaaaaaacaacgttgtgtgcgcGAGCTGGGATCCTTATTTCATGACGA
TGTATCTCGGTTCTATAAAGCTATCGTAACTTGAAACATTGTGGAAAATG
ATGTTGGATATTAATGAGATTTTCATTAGTGTATGACCGAAACATCAATC
TGTAGAAATAATGCAAAGAGAAGTGATCATCGTATTTCATCAGTCAAAAA
TAGTATAAGTAAAGTAAGTCTGCAACCACAGCCAAAGGTGACCCAAAGGc
ccctctttcgatagctgtctaccaGAAAGTAATTGATTAACTGCTGAGCA
TCAAACAAAGAGGTTTCAAGTACCTTTTGTACTGAGTACGAAGTCTTTGG
TATCACCCAGTCAAATAATAGCGAGtctatgtattcgagataaatcgagg
agacggtataaagcaaagttgatNTTCGTTAATTAGAttatagcgagttt
atgtattcgagataaattgagggggacggtataaagcaaagttgacatgt
ctcctaaatcaccgtccactttgctcgacgacggtaaaaacaccaaaata
ccgtcgtctgtttaggtgagcaaaggcgatatagagccgtacatcaacta
tcgactgtTTTGTGTTAACGTCACTTACCGTGGGATCCTGTTCATGAAGC
TGTATCTCGTT Run BLAST on NCBI transcript from alignment at scaffold_167:1102257..1103317 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050177 ID=TCONS_00050177|Name=TCONS_00050177|organism=Clytia hemisphaerica|type=transcript|length=1061bp|location=Sequence derived from alignment at scaffold_167:1102257..1103317 (Clytia hemisphaerica)
AACGAGATACAGCTTCATGAACAGGATCCCACGGTAAGTGACGTTAACAC
AAAacagtcgatagttgatgtacggctctatatcgcctttgctcacctaa
acagacgacggtattttggtgtttttaccgtcgtcgagcaaagtggacgg
tgatttaggagacatgtcaactttgctttataccgtccccctcaatttat
ctcgaatacataaactcgctataaTCTAATTAACGAANatcaactttgct
ttataccgtctcctcgatttatctcgaatacatagaCTCGCTATTATTTG
ACTGGGTGATACCAAAGACTTCGTACTCAGTACAAAAGGTACTTGAAACC
TCTTTGTTTGATGCTCAGCAGTTAATCAATTACTTTCtggtagacagcta
tcgaaagaggggCCTTTGGGTCACCTTTGGCTGTGGTTGCAGACTTACTT
TACTTATACTATTTTTGACTGATGAAATACGATGATCACTTCTCTTTGCA
TTATTTCTACAGATTGATGTTTCGGTCATACACTAATGAAAATCTCATTA
ATATCCAACATCATTTTCCACAATGTTTCAAGTTACGATAGCTTTATAGA
ACCGAGATACATCGTCATGAAATAAGGATCCCAGCTCgcgcacacaacgt
tgttttttAACAGTCATCAAACGTCGTAATATTGGACCGTTATGAACGTT
AAATGGACTTTAGAATAACGTTTGTATGCAAACTGATAAagctttgactt
tcaaaattcCTTATTTCTCAAAAGCTGGATCACGGTAAAGATACTATACT
TATATACATAATCAAACGAAATGAGTTGTTTTCGTTCACTTCAAATCTTC
AACCCACCCTTTGtatgttctttattttttcttcttttgaggGAGGGTTG
TTTTCTTCGTACATTGCTCAATGAGTAGCCTACGTCGTTCAATAAAAACC
TCTTAAATGTTTCGAAAATTCGGTTTTTTTATACACGCCTACACTAGACT
CGGGGAAAAATGTCTTAAAATCGCATGCCTATTGGGAAATTCCATAACAA
TCTTATGAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050177-exon-scaffold_167-1491911889:1102257..1103317 | TCONS_00050177-exon-scaffold_167-1491911889:1102257..1103317 | Clytia hemisphaerica | exon |
| TCONS_00050177-exon-scaffold_167-1510915933:1102257..1103317 | TCONS_00050177-exon-scaffold_167-1510915933:1102257..1103317 | Clytia hemisphaerica | exon |
| TCONS_00050177-exon-scaffold_167-1575043694:1102257..1103317 | TCONS_00050177-exon-scaffold_167-1575043694:1102257..1103317 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:1102257..1103317 . |
Blast
The following BLAST results are available for this feature:
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