TCONS_00050290 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050290
Unique NameTCONS_00050290
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050290 ID=TCONS_00050290|Name=TCONS_00050290|organism=Clytia hemisphaerica|type=transcript|length=169bp
GTCACATACAAAACAATCCCTTGGGACATCAAATTCTCAACTCATCGATT
GAATTGCAGTTATACTATAAATTTGAAATACTGTCTGTACATACAAATAC
ATCAGTGGAGAAATAGTGACTTGTGTCAAGGGTTCCAGCGAGAAGAAATA
TCAAAAAGACGATAAATTC
Run BLAST on NCBI

transcript from alignment at scaffold_168:191007..191175

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050290 ID=TCONS_00050290|Name=TCONS_00050290|organism=Clytia hemisphaerica|type=transcript|length=169bp|location=Sequence derived from alignment at scaffold_168:191007..191175 (Clytia hemisphaerica)
GAATTTATCGTCTTTTTGATATTTCTTCTCGCTGGAACCCTTGACACAAG
TCACTATTTCTCCACTGATGTATTTGTATGTACAGACAGTATTTCAAATT
TATAGTATAACTGCAATTCAATCGATGAGTTGAGAATTTGATGTCCCAAG
GGATTGTTTTGTATGTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031847XLOC_031847Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050290-exon-scaffold_168-1491911889:191007..191175TCONS_00050290-exon-scaffold_168-1491911889:191007..191175Clytia hemisphaericaexon
TCONS_00050290-exon-scaffold_168-1510915933:191007..191175TCONS_00050290-exon-scaffold_168-1510915933:191007..191175Clytia hemisphaericaexon
TCONS_00050290-exon-scaffold_168-1575043694:191007..191175TCONS_00050290-exon-scaffold_168-1575043694:191007..191175Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_168supercontigscaffold_168:191007..191175 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050290 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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