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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050388 ID=TCONS_00050388|Name=TCONS_00050388|organism=Clytia hemisphaerica|type=transcript|length=1827bp
CATATCTTGTCATATCCCATCTCTGCTTTAAAAGTTTATTGTTGGCAGGA
GTTATCGATTGGTAAGCACGATGCATTCTACCtacttttacaaaagaaat
taaaatcccataaaagttagaaaaaccCAAAAAGGCCCCTGCGCACTCGA
GATATGTCCTCGCGCTGTAATTTGAGAAGAACAAATGGCcgacttttttt
gtttttgttctctGCCATTATCAAACGTTACTATGGTGACGTTAGATTTA
GCCTCTATCGTGGAGCAGGCGCTACAAAAGAAGCGCAGTCTAGTAActtc
cgaaaacgaaagtgaaagtttaGCTGGATGGAGCCtactcaaatttcaaa
aaaggtcaAGCAGGTATATAAGTTGAACCTCGTGATTGACACATTTCTAC
TATTCACCTTAAAGTATAAcctctaacaaagaaatataaaatCAAAGCAA
AATGGTGTTCCGAACAGCAATCATTGTTGCGTTGGTTTGTGTTTGTTATC
GCTCTCTATATTTGTGGTTGGTAGCCAGAGGTGTGGGCGTGCATTTCAAC
GAGCACCACCCCGGTCAATGCAGCGTCATCCCTGGCATCTCATGTGGATC
TGAAAAGATAGTTGTCGCCAAGAGAAATTCCAACCAAGGATTGGCTTTCA
TAACAAATGGTTTTAAGGGGTTTACAAGGTGTTCCAAAGAAACGACGCAA
GGTAATATTtatactttcgatttcaagaaTCCAGATGTTGGAGCTGTGAA
GTTGAACATTGATCACTCGGAGATTTGGCAATCCTTTGATCCTCACGGCA
TCGATTTGGTAGAGAACGAAAAAGATAATACAATTAAATTGTATGTTGTT
AACCATGCCAAATTGACTGAAAGCGTTGAGGTGTTTTTGTTTGATCCCCA
ACAACCTAAATCGTTGAAACATTTAAATACTATAAGAGACAAGAGTTTCG
TTTGTTTAAATGATATTACAATGTTGAACGAAAACGAGTTTTATGTGACT
AATTGGATCAAATATTGTCATTATCCGATGGTAGTACCGGCTCTTGAATT
GTTCTTGGGTGTTGAGACAGGCTCAGTGGTTTATTATGATGGCAACAAAG
GAGAGGTGATTGAGCGTGGCCAGGGTTTGAATGGTATCGCACAATCTAAA
GATTCCAAACAACTTCTTGTCGTCTCTTGCAGTACCACTTTCCTTCATGT
GTACGAGATATCAAACTCACCAAGTAAACNCTCTTGCAGTACCACTTTCC
TTCATGTGTACGAGATATCAAACTCACCAAGAAAACTGAAGTTGATTGAG
AAGATCGATTTGATTTATTACGGAGATAATATCTACACTGATTTTCTCAC
AGGTGATTATTATGTTGGTGTTCAAAAGAAAGTCATCAAGTTATTGCTGG
CAGTTAAGAACCAGACACGTTTTGCACCATCAACAGGTGTTCGCGTCCAC
CAGCGAAACGGTGTTTATGAAGTAGAAGAAGTGTTGCATGACAGTggtcg
ttcgttcgttcatggTGTCTCAAGCTTTGTCCATTATAAAAACCAATATC
TCCTTGGTACCATTTTTCATGACTTTGGTTATTGTAAGAAAGATTGATAA
ATAGGGTAGAATGGACAGTTAAATAATgagctatttcaaaatataattaG
ACCCGTGTTACTCTGGGAAAATAGCTACCTACAGTAGTGTGGTGGCTGGG
GTGGTCAGGGGCGATTTTTGGGGGAGCTGATAAACAAGAGGCGCAAAAAG
GCGCATTTGATTACTAATGTCAGCGCCTTTTGCTTTTTTAGACCTTAGAA
TTAGCAATTTTTAAAAAGCCAAATATG Run BLAST on NCBI protein sequence of TCONS_00050388-protein >TCONS_00050388-protein ID=TCONS_00050388-protein|Name=TCONS_00050388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
MVFRTAIIVALVCVCYRSLYLWLVARGVGVHFNEHHPGQCSVIPGISCGS
EKIVVAKRNSNQGLAFITNGFKGFTRCSKETTQGNIYTFDFKNPDVGAVK
LNIDHSEIWQSFDPHGIDLVENEKDNTIKLYVVNHAKLTESVEVFLFDPQ
QPKSLKHLNTIRDKSFVCLNDITMLNENEFYVTNWIKYCHYPMVVPALEL
FLGVETGSVVYYDGNKGEVIERGQGLNGIAQSKDSKQLLVVSCSTTFLHV
YEISNSPSKXSCSTTFLHVYEISNSPRKLKLIEKIDLIYYGDNIYTDFLT
GDYYVGVQKKVIKLLLAVKNQTRFAPSTGVRVHQRNGVYEVEEVLHDSGR
SFVHGVSSFVHYKNQYLLGTIFHDFGYCKKD Run BLAST on NCBI transcript from alignment at scaffold_17:70731..85158- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050388 ID=TCONS_00050388|Name=TCONS_00050388|organism=Clytia hemisphaerica|type=transcript|length=14428bp|location=Sequence derived from alignment at scaffold_17:70731..85158- (Clytia hemisphaerica)
CATATCTTGTCATATCCCATCTCTGCTTTAAAAGTTTATTGTTGGCAGGA
GTTATCGATTGGTAAGCACGATGCATTCTACCTACTTTTACAAAAGAAAT
TAAAATCCCATAAAAGTTAGAAAAACCCAAAAAGGCCCCTGCGCACTCGA
GATATGTCCTCGCGCTGTAATTTGAGAAGAACAAATGGCCGACTTTTTTT
GTTTTTGTTCTCTGCCATTATCAAACGTTACTATGGTGACGTTAGATTTA
GCCTCTATCGTGGAGCAGGCGCTACAAAAGAAGCGCAGTCTAGTAACTTC
CGAAAACGAAAGTGAAAGTTTAGCTGGATGGAGCCTACTCAAATTTCAAA
AAAGGTCAAGCAGGTATATAAGTTGAACCTCGTGATTGACACATTTCTAC
TATTCACCTTAAAGTATAAGTGAGTATGATCTGTTCTTATTGTATTCATA
ATCTTCTGCTTTGCTATTTTGTGTCTAGTCTAGAGTCTGTGAGATTTTGC
AACCCAATAGCAATTGTCGTTTTGGCGAACGAACGCGTGCGACAGGCTTT
GAAAGGCTTTGAATAACTTGACCATGGGACTTGTTGTATATCTGACCTGT
ATTTTCACTTACTTTAAATCTCTTTGACAACAAATTTGTTTTGATAACTC
CACCAAGTTTATCAATCATACTTTCTGTCATATAACATGCCAGAGATCCG
ATCAATCGAACTTGTCGAACCAATCAAACAATTCAAACTAAGCGAACCCA
GTCAAACGATTAAAATTCAATTAAAAAAATTAATCGAACCTATATCGAAC
ACTCACAATTTTTTAAGCAATAGCAGTTCGATCAGTTCGGTCAGTAAAAA
GTTCGATTAGTTCGATGATATTAAATCCTCATACAGTCAGGGAAATCCCT
CAATTGCGGTAGTAATTTCTTACTGCAATTGCGGGATAAACTTCACTTTT
GAATTTTTCATATACCGCAATTGCAGTATATTCAAGAAACAGAATTCAAG
ATTCAAGGAGAAAACAGGCAATTTTTGTACATAATTGGTCATATCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTATCTTTTGAACGCACAGACAAAATATTTTTTCC
GTAGATCAGATTCTTTTAATAAAGAAAAGCTATCTTCTCGTACGATTTTT
TACAGTCGATGTTTGTTGACCAGCACTATATGTAGCTGTTATAAGCCTTT
GTAGGCACGAATGAAAACTACCGCAATTGCAGTATACCGCAATTGAGGGA
TTTCCCTGACTGTCATATCTTCCCTCGCCTCGCTTGCAAAAACTTTGTCC
TGGTGTGACTCTTCAATCTTAGATCATCATCAGTGTGAAAAGATTTTTCA
ATTTAAATATTCATTCAATCAAAAGATATCAAACAAAGTTTATTGCTGGT
TGATCGACAAAAGGCTGTTTTTTTTGTCGTTTTTTACTACTTTATAGTAT
AGTGTTTATAGAGTCAACCAGCAATAAACTTTGTTTGATATCTTTTGATT
GAATGAATATTTTTGAAAAATTTTTTGAGAGTGATAATGATCTAAGATTG
ATGAATCACTCCTGTGAAAATGGTAATTATACCACATTTCTACAAGAAAT
CGATTTTTTTCTTCTTCATTTTTCATTTTCATTTTCCTTTTTTTTCTAAA
ATTTTTTACTTCATAATATTCCACTCACGATTATCTTTTTAAGGAGCACA
AAATCGCAATTCATTCGAATTCTATCAAAAGTTACAGCTATTTTTTTCTC
CAGCTGCAAATTATTTTGAGACAGACTTTAGGCCAAGCCTAATTGATGGT
TTGGTTCTTGTCCTCCAACCGACTCTATATATTTGAGAAAAGATGTTTCA
TTTTGAGTCAAAAAAATCGGCTCTTTTTTTATAAACAAAATCCACTTCGC
GCACAGAAACGAAATATTAAATAAGCGAGTGGCAAAAATGTCTTTGTGTA
GCCTATACTTAAAAACAAATATTAAGCACCTAAAAGCAGTCGCAGCTGTA
TTCCTTGTAAGAACACGAGGTGAACGCCTCAATCTGCAAGTGTAGAAGTG
ATTTTGTGATCGTTGTGTGTGGCCTTTGTGGATCCGGGCGGCTTCAGGCT
ATTTCTTTATATTCACGGTCTTAGGATGTTTAAACAATTGTGAAGGGCTC
ATTGTCTTGAGATCAGGTTTTTTTGCCAAACCAAGGTTTTCAATGGTGGG
GGCTGGGGATTTGGGGATTCATAAACAAATCTTTAATCAAAGTTTTTATG
AGTTTAAATGCCTCTACTAAGAACTTCAGCATTGGAATAATGGATAACCT
ATGCAGAGGTTAGTAAAAGTGTGTTCTAAATAGACCCTTTGTAGGACAAA
ATTAGTTTTTGACTTCAAAAATTGGCAGGAAAAATATTACACAGTGACTC
GAAAAACAATATATAATCTTAACCAACTATATTTTGCGATAATTTATCTC
TACATTGAATTTTCGTAGACGTGACTAGTGAATTGGCTTAGCCTTAGACA
GCTCAATTCATATTATCTTCACCCGTCAGTCCAATGAGTGCTAACAACAC
AACTTTGTGACTTTAGAAATTACTTTCCAAAACAAAGAAAAATCGATTTT
GAAAAGAAAACTAAAATAATGTAATTGTTCTTTTTTTATTAATTCTGAAA
CACCCTGACTCCACGAAAGGATTAGAAACATTTGAAAATAAAATCATATC
ATACGAATATCTCTTTCCCTTCTTCGAAATTAGATTTTCCAAGTTTTGCA
ATGTAGTGTCTTCCAATTAGAAATCTTGATCCTGATTGGTCAGCCTAAGC
TGGGCATTCAAATAGGTAAAATTTTCCAGTTCTTCCATAAGACGCCAAAA
AAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA
AAATTCTTAAAAATATAAATATTTATAAATAATTTACAAAGTGTTATAAA
CGCAATCTGTACTTAGGTGGCCGCATCTTTTTGATTAGCTAGACTCCCGG
GGGGGTACTAGGGTTGCGAGCTGACGGGGGGGTGCCGCCCGACTTTTGAA
CTTTGGACCCTTACCGGGACTAAAAAGGAGAAAACAAAGGAAAATTTTGG
GAATTTTCCGACCCTTAGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGGTAAAAAGTTAAAATTTTCCTATTTTTCCGACCCTT
AGTGGGACTGAAATTTGATTTTCTGATTTTTCCGACCCTTAGCGGGACTT
TGGAAATCCAAAAACTACCCTTAAGGGCGGCACATACCGTACCCTCCATT
TGCCTAAGTACCCCCCCGGGGCTAGACTATAAGGCGGTCTCCCTCCATAT
ATTTTTTGTGCATATCATCACTTGTATCTTTTTTGTAGTGTTAAATGGTA
AATAAATACTTACTTACTTACTTAACTTTTTGGGTACTTTTAGCGTGTGT
TGTTTTTACAGATCATAATGTGGTGTTTCAAGATGGCGGCTCAAGCGATA
AGTTTATAAAGTGTTGTTTCAAAGTATTTCCAGGGTGAATCTGTTGCAAG
CTTCAATATCTGTCATTTATTTTTTTAACTTGGCAAATCAAACACATGAT
TTTCATCAAGGGGATTCTTTTTCTACATCTTATGAACGGTTTGTGTAATT
TACGATGCGCGATCCAACGATTCACGATGCGCGATGCACGATCCATGCAT
ATATTATGTTAATTATTCTAATTATGCATTTAAAGGTTTTAGTAATCACA
TACTTTCATTCCTTCTTTTGTATTCCTGGNCAAGTTTTTGTTTATGTTGA
ATTTTCTGATACTTTTTATTTTTGCTTTTTATTACAGTAGTTTTTGAAAT
AAAAACATATTTTTCTTGTTTGCCTCTAGAGGGGGAATTGATGGTGTTAT
AATCAGAGGTGCCAACTCTCACGCATTGGACCTGAGACTCACGCATTCCA
ACACTGTCTCGCGCACTTTTTCAAANCGCATTGGACGTGAGACTCACGCA
TTCCAACACTGTCTCACGCACTTTTTCAAAAGTTTGATTTCTCATGCATT
TTTGACATTTAAAATAAATTTCCTTGTTTTTCCGATTTTTTTAAAAAAGT
TTCCCCAATGTTCCGATTTTCGGAAAACAATTTTCTGATTTTCAGAAATT
TTTTTCCCAGATTTCTGATTTTTGGAAAAATTTTCCCAGATTTTCGATCT
TTTGGAAAAAAATTTCCGGTTTCCGAAATCGGAAAAATCGGACTAAGATT
TCGGATTTTTGGAAAAATTTTCCCAGATTTTCGATCTTTTGGAAAAAAAT
TTCCGGTTTCCGAAATCGGAAAAATCGGACTAAGATTTCGGATTTTCCTT
TGAAATTTTTATCTCACGCAAAATGCACATCTCAAGTTGGCAGGTCTGTA
TAATGTTATTGGAATTTGATAAAGTATACAAAAGTACATACAGCTACTGT
CTAAATTTGATAAAGACTGGATGCAATCGTTTTTTTTTTGGACTTGGACG
TGTTTGGCTTCAGACGACCCTGCTGATACACCGGACATTCCGGCGTTATT
TTTTGTCTTGTGTTTTCTTCATTAAATTTTCAAAAGTGCACACCGGACTA
CACCGGACTGTCTAGTACCATCAACTGCTCCAACTTGGGACGAGTACGCA
ACATGGGACTTGTTGATATCTGGCTCTACCTGCTGACTGTAAATCAGGGT
CGGTCAGATGACGGGAACCAAATGATGACGATCACATCTCCTATTATTGG
ACTTTCAAAATTATGACAAATGGTCTTTGGAATTTGATCAATTATTGATA
TATATATATACAGTTTTTGTTGAAATTGATCAAATTATTTTTCACGCAGT
TTGGAACAGCAGATTTTTCTGATCTTTGCACACGTTTTTGGCTTTAACTA
AATGGTTGATATGGAATGAATGGCGACAACAGTTTTTACATATCTTTTAT
CGGACTTGCAGAAAGCGGACTGCAGAAAGTTACNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACACTATGTAGACTAAC
TAACATCCCAAACGAGCGAAGTTCCTGGACTTTTCAACCGGCAGCTAATT
GCCATTGTATCGAACGCTGATCTAACATTTGCTCACATCTCATCAAAATG
ATCCCTTTCACCCCTTTGACCCTTCCAACCCTCTTAGCTCTTTTGGCTGA
CCTTCCAGCCTCGGCTGGTTTATTTTTTTTGAAATCTTGTCCTCTGATAT
TCAAAGTATTAGTATTTGCAGGGTTCCTGAGGAATTAGAAGAAAAATGTT
TTTTTCATTTGTCTTCTATTGTCCACTGGACAAATTAGAGTCATAATGTC
ATACTTTTAAGACAGACTTTAGGTTTAAATTTTGATGAATTTGAATTTTC
ATATTTTCCCTCTCGTACCATTAAAGTGTTTGCTGAGCATGAATCTGGTA
ATGTCACCCAAATAGGTGAAAGAATTTTGAAAAAATAAATTTTTGAATTT
CACTTTTAGTCCTGGATAATCTTTTTATTAATGACTTCAATTTTCAGAAA
ACATAATATCAGGGCTTAATCAAACTGGCTTGGTCCAGAAATTTGACCTA
GAGTAGTTATAATCAGACAAATTTGGCAAAAAACTCTTTGTTGTTTACAC
TTCATTTAAGATGAAATATGCTAATCTAATACCTGTCTTAGATTTCAGTC
CATGGCTAATATATTAAGCTNAAAAATATTCCCATAAAGTTTGACTTCAT
GAAAAGAAAACTGGCTATGATCAGGTAACTTCATTCTAGATTTGAAGGAC
TCATTATAAGCTTTCAAAAAAAACCAAAAGTTTTCTATATTTCAGTTGAT
CAATAAAAAATTAGAAAACAAGGTTTCATACCTTGTTGGTTGAGGACATA
ACTTTTTGTCAAATTTACTTTAAAATCAGCAATAAACATTAAACTGAGTA
ATTATTTGGCTTTTAATACTTTGCTGTACTTGAACCAAAACTTTAATCAT
TGAAATTTGTTGTCTTGAAAGGTCTTTGTAACTATGATTTCCTGAAAATT
GAAGATTTATCTGTAAAATAGAATCCAATCATATATCATTTTTTGTCATA
ATCTAATTTTAAAAGTTAAATTTTGAGCTTGATATTAACTGTTGTACATC
TTCATAATCAGTAAATATGATTTTTCCTTGAAAAGCCACTCAACCTTTTC
AATAGAAAGGGTTAAATTGGTAATAATGCTATGTTGCAGACATAACATTT
TTTCTTCCAGGGTAGAAATAGAACATTTTACATCATTTATTTAAAATTTT
GGAGTGTCTTTTTCTGTTCCAAAATTTAAGGAATATTTGAGACTAAATCA
ATATAAAACCAAAAGATTTGGTTTGGTTTGATTTCAGTTATTACATGTTT
TTCTTCATGAAAAGAACAAAAGAAGACTCGACAATGATATTAAAACTTTC
TAACATTTCTAATTAAGAATTTTTAACTATGCTTGTTTTAGTCTCATTGA
ATATCTGGATCATCTCCCTAAGTTCATATCAGCTTGATACAAAAAATACA
AAAATCCCTTTTGCTTGCTTGCCTCCCTCATTTCGCTGGCTTTGTTATAC
GATATACGCGCTACTACAGGCAATTAGATAAACAAAAGAAGGGGGAGAAA
GAAAAAGAAGAAACTTCTCGTCGATAAGAAGAATGGACACATAACTGCTG
AAGAGGGTTAAAAATCTGATAAATACTTTAAAATAGTTATGCTCGCAACA
TCTGATTGGAGCAATTCTAACTAGTCTGTAAGTGAATGTGTAGTAGATTA
TGTTGTGTGAACACTACACAATGAATTTAATATGCAAATTAATGCATGAT
TTATTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTGTATAAAATGACCCCAAATGTAACCCTTGACATAGAAAAATGATT
CAGCTGAGTAAGGATAACTCCTTGAAAAATTTAAAGGATTAAATAGTGTG
CGGATATAACTCGAAGATGTGAACGGAAACAAGACGCTGTTCACTTCAAA
ATAATTTTTCGTGTTGACCATTTTTGAAACTTGCTCTAGTTTCCCATTAT
CTGGGAAGGATTTGAAATGTAAAAACCAGTGAGCTAAAGCTTTTCAATTT
TTTTCTGTGTCAAATCTGTGCGGACATAACTTTGTGAACGGAAAAAGTTA
TGTCTGCAACATTTTTGATTTTATATGCCAAAAAAACTTTTTTTTCCGGT
TCTTACTGTGTTTTTCATTTTTCATATCCTCTGGCTGTGAGAACCAAGCT
GAAAAAGCATGTTGTTGATGAATTATTATATTATGAATTATTACCCTATA
GAAAAATTTGAGTACCTGTTATATCAGAAAAAATTACTGTTTAAGCTTGC
CCATTTCAAAATTGACCAGAAAAAATAAGATTTGATATGACTATATACCT
ATTTAGAGATTTCACCAAAGCCTCAAAGTAGGAAAAGTAATAAATCGAAA
TGTGGGCCACATTACCAGATTCATGCTCTTCTATAAAAAAGTTTTTCAGC
TATCAGGTTTCTGATCTTTTTCCTAATCATGTTAGCAGAGACGTTTCGAT
TGACATTAACGTAGGTTTTTTATTGTTAGCACCCTACCCAATTTTCCCGT
GACAGCAGCTGCATGACTATGTTTGAAAATGAAAAATAGCTGGTTATCTC
ATTAAGGACTGATGGGGCCTAAATTTGTAGTTTACCAATGTCAATCTTTT
TATTGGGGTGCATGAATAGGCTTCTTTGTGGGATTTCCTCTGGTGTTCCA
TCACAAAAGAAATTCCCCTGACATCACTACACTGTATAAGAAAGTACTAA
ATGGGTGTACAATACACCTTTTGAAAACCCGCTTGTAACAAATGATTATA
TTTTATTACAAGCAGATTCTGGCAGATTATAGAAATGGCATTAACTAAAA
AAGATCTTGTATTCGGAATCATGTACATTGTTTTTGGAAAGCAGTTTCAT
CTTTGGCTTTGCGGTAAAGGTGTTAATGTGAGATTCATCAATCACCGACC
AGGAGATTGTAAAGTGTTGCCCGATTTACAATGTGGCTCAGAAAAGATCA
GTGTGACTAGCAATGGTTTAGCATTCATCACCAATGGGTTCGCTGATGCT
ACGAATTGCAACAAAGATTTCTTGAGAGGAAATCTGTATTTGTTTGACTT
CAACAAGCCTCATCATNAGTGTGACTAGCAATGGTTTAGCATTTATGACA
AACGGTCCATCCTCTACGAATTGTAACAAAGATTTCTTGAGAGGAAACCT
GTACTTGTTTGACTTCAACAAGCCTGATCAAGGTGCGAAGCGTTTGCAAA
TGAAGAATGTTTCTAAAGAGTTTTTGGAGAATTTCGATCCTCATGGCATG
GATGTGTTTGAAGTGAATGGAGTGGTCAAATTGTATGTTGTCAATCACCT
GGATGACTTTGATGCCATTGAAGTATTCCAATATTCATCTGAACACCCTA
CAGATGTTTACCATGTATCAACCATACGAAATGATTTGTTTAACTGTCTT
AATGACGTAACGATTATTGATGAAGATGAATTTTATACCACCAACTTCAT
CAAGTTCTGTTCCCGATCCAAATACCATTTCTTAACTTTCTTTGAGCTTG
CTTTCGGTATGAATACGGCAAACATTGTATTTTACAAAAAAGGCTTCACT
GCTATTGCTGCTCACGGTTCCTTATTCAACGGAATAGCACTTTCTCCTGA
TAAAAAATTTCTTTATTCTGCATCAACATCCACTTCAAGTATATCTGTGT
TCGAGCGTTACAATATTGGCCAGTTGAAACGTGTTAAACAGATTGAGGTA
GGGTATTTCCCCGATAACATTCACATCGACAGAGAAGGTCATTTGTATGT
TGGAATAGGGAAAGATATGTTTGGATTTGCACAGCTTACTAAAAATCAAA
CGGACTTTGTCTCAGCTTCAGCAGTTAAGGTTGAAATACCTGGAGATTAT
GACTGGAGAAATGTCAAAGTGAAAGAAATCCTTCATGACGACGGGAAAGA
TTTTGTTCATGTCGTGAGTTCTGCTGTTTTCTTCAATGACCAATACTTGC
TCGGAACAGTTTTTCATAAACTTGCTTATTGCAAAGTCTGGAGTTCAAAA
TTATTGCATACTGCAACTAACAGCAAAAAAGGCTTAGCTCCATAATCTTT
ATGAAATTTGTTTCTTATTATTTTATATTTAGCATTTTACATTTTGACTC
TGAGTTGTTTTACTTTTTGAGAGAAAAATATGAAATTATAATTACTTAAA
CTCACCTGTCTGGTGAATTTTCTTTTTATTGCAACTTAGTTTAGAGCTAA
AACACTGCACTGTAATTCTACCGAACTCTTTGTTTGAAAATATGTATTGA
GCAAAAAATCGACATTTTTTCTATTTGTTTTTCAAGAAACCCATTTCGTA
AAATTTTGTCCACTTTTTTTTTTCTAGAGTTATTCAAACAACATAGCAAT
CTCTGGCCCATTAACGATTCGATNCCGCTATTTTTTTTCTAGAGTTTTTC
AAACAACATAGCAATCTGGTCCATTAACGATTCGACATCAAAATTAATCT
TTTTAAAGAGTAAAAGGTTGAAGATTACTCGCCAAGATGACATTAAATAA
GAAACATCTTGTGTTTGGTATTCTGTATTTCATTTTGGCAAAGCAAATCC
ACCTTTGGTTATGCAGTCATGGCGTTGCTACCCGCCACATCAATCACCGA
CCTGGAAACTGTAAAGTTGTCCCCAATATACAATGTGGATCGGAAAAAGT
CAGTGTGACTAGCAATGGTTTAGCATTTATGACAAACGGTCCATCCTCTA
CGAATTGTAACAAAGATTTCTTGAGAGGAAACCTGTATTTGTTTGACTTC
AACAAGCCTGATCAAGGTGCGAAGCGTTTGCAAATGAAGAATGTTTCTAA
AGAGTTTTTGGAGAATTTTGATCCTCATGGCATGGATGTGTTTGAAGTGA
ATGGAGTGGTCAAATTGTATGTTGTCAACCACCTGGATGACTTTGATGCC
ATTGAAGTATTCCAGTATTCATCTGAACATCCTACAGATGTTTACCATGT
ATCAACCATACGAAATGATTTGTTTAACTGTCTTAATGACGTAACAATTA
TTGACAAAGATGAATTTTATGCCACCAACTTTGTGAAGTTTTTTTGTCTT
CGCTCGAGATTTAAGTATTTGTCGACATTTGAAGTGATTTTTCCATTAAA
CACTGCAAATATTGTATTGTACAATAAAGGATACAGTAGTATTGTAGCTC
ATGGTGCTGTTTTAAATGGTCTTGCTCAGTCCCCTGATAAGAAATTTATT
TATGCGGCGTCTAGCTCGACGTCAACGATCGTAGTTTATAAACGACAAAA
TGAAGGCCAGCTGAAACGTGTATCGCAGATCAATGTCGGGTATGCACCAG
ACAATGTACATGTAGATAAAAAAGGTCACGTATACGCCGGGACACAAAAG
AATTTCTTTGGAATGGGTCCTCTCTTGATGAATCAAACGGACTTTGTTTC
AGCTTCAGCAATCAAGGTTGAAATACCTGAAGATTATGACTGGAGAAATG
TCAAAGTGAAAGAAATCCTTCATGACGAAGGGAAAGATTTTGTTCATGTT
GTGAGTTCTGCTGTTTTCTTCAACGATTATTACCTTTTTGGAACAGTTTT
TCATAAACTTGCATATTGTGATAATACTAAACAAAAATGAAGAAAATCTA
CCCGAAGGAAGTTGTGATTTTTTCAATGAGATACTTAATTCAGTCCCCTA
ATTCAATATCCCAAGACACATAGTACATCAGTTGAAATTCAGCTACCTAA
GCTATAGTAGTATTTATTGAGCCCTTTGGCGTTGAAGAAAATCTCCACGA
TTATATATTTTTTTTCTCAGGTTTTTTTAGGGGCTCGATATCAGGTTTTT
GAAAGTCATGCCATAAAAATCGATAAAGGAACTGAAAGTTTTTTAGCTCT
CACGCATTGGATAAATTTGAGTACAAGAATATTCTAAAGTTGTTATTTCA
CTTCATTCAACTGTGTGTGATTTTACTTTCTATAGAAATTTGTCCGTTTT
TTTTTATAACACTTGATGATTATTGTTTTTAAGTTTTATGAATCAATTTT
TTGTACTTCATTTATTTTTTTATTCTACCTTTAACTGTATATTTCATACA
CTCCAACGAAAAACTTTAACCATCACCGTACAAAACAATTCTATTCTTCT
CTGTCCTTCTTGATAATCCTCGCTACTGCAAAGGCGTATTCTGAATTAGA
TCCACTTCAGAGATGCCCTTGTATATCTTATATTTTTAATGCATCTCAAA
TTTTTTAGATTATAGTTTACATACATACAATCATATTGTTTATTTTAATC
ACTCAATTTTATTCATCTGAAAACTTGAAAATGACACGAATTTGGAATCA
TGTGTTACGTTAACGTAAGGGTTAAGCATCCCCATATTTCGACGTCCGAA
AATTTTTAGGCTGTCAACTATTCATCGCTCTTGTCTCACTGAATGGAGTT
TCTATGCTACAAAGAGTTCAGCTTGAATATTTATAAATTTTCTGTTTAGC
ATCTTTTTTTTTCAATTTAGCCTCTAACAAAGAAATATAAAATCAAAGCA
AAATGGTGTTCCGAACAGCAATCATTGTTGCGTTGGTTTGTGTTTGTTAT
CGCTCTCTATATTTGTGGTTGGTAGCCAGAGGTGTGGGCGTGCATTTCAA
CGAGCACCACCCCGGTCAATGCAGCGTCATCCCTGGCATCTCATGTGGAT
CTGAAAAGATAGTTGTCGCCAAGAGAAATTCCAACCAAGGATTGGCTTTC
ATAACAAATGGTTTTAAGGGGTTTACAAGGTGTTCCAAAGAAACGACGCA
AGGTAATATTTATACTTTCGATTTCAAGAATCCAGATGTTGGAGCTGTGA
AGTTGAACATTGATCACTCGGAGATTTGGCAATCCTTTGATCCTCACGGC
ATCGATTTGGTAGAGAACGAAAAAGATAATACAATTAAATTGTATGTTGT
TAACCATGCCAAATTGACTGAAAGCGTTGAGGTGTTTTTGTTTGATCCCC
AACAACCTAAATCGTTGAAACATTTAAATACTATAAGAGACAAGAGTTTC
GTTTGTTTAAATGATATTACAATGTTGAACGAAAACGAGTTTTATGTGAC
TAATTGGATCAAATATTGTCATTATCCGATGGTAGTACCGGCTCTTGAAT
TGTTCTTGGGTGTTGAGACAGGCTCAGTGGTTTATTATGATGGCAACAAA
GGAGAGGTGATTGAGCGTGGCCAGGGTTTGAATGGTATCGCACAATCTAA
AGATTCCAAACAACTTCTTGTCGTCTCTTGCAGTACCACTTTCCTTCATG
TGTACGAGATATCAAACTCACCAAGTAAACNCTCTTGCAGTACCACTTTC
CTTCATGTGTACGAGATATCAAACTCACCAAGAAAACTGAAGTTGATTGA
GAAGATCGATTTGATTTATTACGGAGATAATATCTACACTGATTTTCTCA
CAGGTGATTATTATGTTGGTGTTCAAAAGAAAGTCATCAAGTTATTGCTG
GCAGTTAAGAACCAGACACGTTTTGCACCATCAACAGGTGTTCGCGTCCA
CCAGCGAAACGGTGTTTATGAAGTAGAAGAAGTGTTGCATGACAGTGGTC
GTTCGTTCGTTCATGGTGTCTCAAGCTTTGTCCATTATAAAAACCAATAT
CTCCTTGGTACCATTTTTCATGACTTTGGTTATTGTAAGAAAGATTGATA
AATAGGGTAGAATGGACAGTTAAATAATGAGCTATTTCAAAATATAATTA
GACCCGTGTTACTCTGGGAAAATAGCTACCTACAGTAGTGTGGTGGCTGG
GGTGGTCAGGGGCGATTTTTGGGGGAGCTGATAAACAAGAGGCGCAAAAA
GGCGCATTTGATTACTAATGTCAGCGCCTTTTGCTTTTTTAGACCTTAGA
ATTAGCAATTTTTAAAAAGCCAAATATG Coding sequence (CDS) from alignment at scaffold_17:70731..85158- >TCONS_00050388 ID=TCONS_00050388|Name=TCONS_00050388|organism=Clytia hemisphaerica|type=CDS|length=1146bp|location=Sequence derived from alignment at scaffold_17:70731..85158- (Clytia hemisphaerica)
ATGGTGTTCCGAACAGCAATCATTGTTGCGTTGGTTTGTGTTTGTTATCG
CTCTCTATATTTGTGGTTGGTAGCCAGAGGTGTGGGCGTGCATTTCAACG
AGCACCACCCCGGTCAATGCAGCGTCATCCCTGGCATCTCATGTGGATCT
GAAAAGATAGTTGTCGCCAAGAGAAATTCCAACCAAGGATTGGCTTTCAT
AACAAATGGTTTTAAGGGGTTTACAAGGTGTTCCAAAGAAACGACGCAAG
GTAATATTTATACTTTCGATTTCAAGAATCCAGATGTTGGAGCTGTGAAG
TTGAACATTGATCACTCGGAGATTTGGCAATCCTTTGATCCTCACGGCAT
CGATTTGGTAGAGAACGAAAAAGATAATACAATTAAATTGTATGTTGTTA
ACCATGCCAAATTGACTGAAAGCGTTGAGGTGTTTTTGTTTGATCCCCAA
CAACCTAAATCGTTGAAACATTTAAATACTATAAGAGACAAGAGTTTCGT
TTGTTTAAATGATATTACAATGTTGAACGAAAACGAGTTTTATGTGACTA
ATTGGATCAAATATTGTCATTATCCGATGGTAGTACCGGCTCTTGAATTG
TTCTTGGGTGTTGAGACAGGCTCAGTGGTTTATTATGATGGCAACAAAGG
AGAGGTGATTGAGCGTGGCCAGGGTTTGAATGGTATCGCACAATCTAAAG
ATTCCAAACAACTTCTTGTCGTCTCTTGCAGTACCACTTTCCTTCATGTG
TACGAGATATCAAACTCACCAAGTAAACNCTCTTGCAGTACCACTTTCCT
TCATGTGTACGAGATATCAAACTCACCAAGAAAACTGAAGTTGATTGAGA
AGATCGATTTGATTTATTACGGAGATAATATCTACACTGATTTTCTCACA
GGTGATTATTATGTTGGTGTTCAAAAGAAAGTCATCAAGTTATTGCTGGC
AGTTAAGAACCAGACACGTTTTGCACCATCAACAGGTGTTCGCGTCCACC
AGCGAAACGGTGTTTATGAAGTAGAAGAAGTGTTGCATGACAGTGGTCGT
TCGTTCGTTCATGGTGTCTCAAGCTTTGTCCATTATAAAAACCAATATCT
CCTTGGTACCATTTTTCATGACTTTGGTTATTGTAAGAAAGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050388-exon-scaffold_17-1575043694:84740..85158 | TCONS_00050388-exon-scaffold_17-1575043694:84740..85158 | Clytia hemisphaerica | exon |
| TCONS_00050388-exon-scaffold_17-1575043694:70731..72138 | TCONS_00050388-exon-scaffold_17-1575043694:70731..72138 | Clytia hemisphaerica | exon |
| TCONS_00050388-exon-scaffold_17-1510915933:84740..85158 | TCONS_00050388-exon-scaffold_17-1510915933:84740..85158 | Clytia hemisphaerica | exon |
| TCONS_00050388-exon-scaffold_17-1510915933:70731..72138 | TCONS_00050388-exon-scaffold_17-1510915933:70731..72138 | Clytia hemisphaerica | exon |
| TCONS_00050388-exon-scaffold_17-1491911889:84740..85158 | TCONS_00050388-exon-scaffold_17-1491911889:84740..85158 | Clytia hemisphaerica | exon |
| TCONS_00050388-exon-scaffold_17-1491911889:70731..72138 | TCONS_00050388-exon-scaffold_17-1491911889:70731..72138 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:70731..85158 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002640 | Arylesterase |
| IPR011042 | 6-blade_b-propeller_TolB-like |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004064 | arylesterase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0004064 |
arylesterase activity |
Blast
BLAST of TCONS_00050388 vs. Swiss-Prot (Human)
Match: PON1 (Serum paraoxonase/arylesterase 1 OS=Homo sapiens GN=PON1 PE=1 SV=3) HSP 1 Score: 114.775 bits (286), Expect = 1.211e-27 Identity = 105/347 (30.26%), Postives = 158/347 (45.53%), Query Frame = 2
Query: 569 CSVIPGISCGSEKIVVAKRNSNQGLAFITNGFK-GFTRCSKETTQGNIYTFDFKNPDVGAVKLNIDHSEI-WQSFDPHGIDLVENEKDNTIKLYVVNHAKLTESVEVFLFDPQQPKSLKHLNTIRDKSFVCLNDITMLNENEFYVTNWIKYCHYPM--VVPALELFLGVETGSVVYYDGNKGEVIERGQGL-NGIAQSKDSKQLLVVSCSTTFLHVYEISNSPSKXSCSTTFLHVYEISNSPRKLKLIEKIDLIYYGDNIYTDFLTGDYYVGVQKKVIKLLLAVKNQTRFAPSTGVRVHQRNGVYE--VEEVLHDSGRSFVHGVSSFVHYKNQYLLGTIFHDFGYCK 1588
C+++ GI GSE + + GLAFI++G K + + G I D D ++L I S+ SF+PHGI +E DN + L VVNH +VE+F F ++ KSL HL TIR K LNDI + FY TN HY + + + E++LG+ VVYY ++ V+ G NGI S D K + + +HVYE ++ L ++ +D DNI D TGD +VG +K+ + P++ V Q E V +V ++G + + G + YK + L+GT+FH YC+
Sbjct: 42 CNLVKGIETGSEDLEILPN----GLAFISSGLKYPGIKSFNPNSPGKILLMDLNEEDPTVLELGITGSKFDVSSFNPHGISTFTDE-DNAMYLLVVNHPDAKSTVELFKFQEEE-KSLLHLKTIRHKLLPNLNDIVAVGPEHFYGTN----DHYFLDPYLQSWEMYLGLAWSYVVYYSPSEVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYE--------------------KHANWTLTPLKSLDFNTLVDNISVDPETGDLWVGCHPNGMKIFFY---DSENPPASEVLRIQNILTEEPKVTQVYAENG-TVLQGSTVASVYKGKLLIGTVFHKALYCE 354
The following BLAST results are available for this feature:
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