TCONS_00050759 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050759
Unique NameTCONS_00050759
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1590

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050759 ID=TCONS_00050759|Name=TCONS_00050759|organism=Clytia hemisphaerica|type=transcript|length=1590bp
GGAAATATTTGCCTCGATGGTTCAAATAGAAAACGTGTTGTTTTCATGTT
GGATTGACAAGGCtttgttttgaatgaaaacgaaagtgtatGTTCCAATA
ATTACTTCCTTCTTTTTCTGTTGATGTCGTCACCACAAATTAAGcaTTGC
TCATTCAAATATGGAAGACACAGACAAGAAACCAATTCACCTTGGTTTGC
TTATACccaaagaaaagaagaagaaaattaagcTACCTGAACGTATAGCA
GATTTATGTTTGATAGAAAATATCAAGATTACTGAAGTGGATATACACGG
CGATTTAGAAAGCCAAGGACCTTTTGATGTGTTTTTCCATAAAGTTGTGG
ATATACATAAAGACGGTTTAAGTTTGGAAGAAACAGAAAATCTAATACAA
AAGACTGTTGAATATTCGAAACGACATCCTGAAATGGTGGTTGTGGATGA
TTTTGAAGTTGTTATTAAGTTAATGAAAAGACAATATCAAGTCGAGATAC
TGAATCAATGCTCAATGACTGTCGATGGTGTTTCTGTTTACGTACCAAAA
ACTGTTGAGATACCTGAAAACACAGCCTTAGATGTTTGTCGCGAACTTAT
CGAAAGATCTGGAATCAAGTTTCCTATCTTGGCCAAACCTTTGGCTTCTT
GTCTCGATGGTGCGCATGATATGAAGATCGTTTTCAGTCATGAGAAACTA
TCTGATTTACCGGTGCCGTGTCTTTTGCAGGAGTTTTGTAACCATGGTGG
TGTTATATACAAAGTGTTTGTGATTGGGGATCGTGTCAGTATGTGCGAAA
GACCCTCCATACAGAATATAGATTGTGATCCTAACCAGCCCAGCCTAGTT
TTCGATACACGAAACGTTTCAAAAACGGGGCGTGCGTTTATTCCAGAACT
TCATGGTACTGATCCGAACGCCCGTGCGTGGTTATCGGGCGAAGAAAACC
CGAACATGTTAAATAAGACTGTTATCCAGGCTATCGTGGAACGACTTTTC
AATGTAACACGATTTCGCNAAGACTGTTATCCAGGCTATCGTGGAACGAC
TTTCCAAAGTAACACGATTTCGTATGTATGGTTTCGATATTTTGAAGGAT
TTAGAAGGGAATTACGCTTTGGTAGATTTGAATCATTTTCCTGGGTACTC
AGGTATCAGCGATGAAACTTTTAAGCGAGACGTTGTAAACATGATTAAAA
GTTGTGCTGGGTTGTAAGTAAATGATACAATAAAGTATACTTTTCTTATa
cgagaacaattttataagaacaataaggctcaaaatcgctaaaaaatgag
aacaatttaagaacaattttgtataaagcctaaaatacctcaattacacc
ctataagaagaaaaagataagaacagccgagcatcagaaaaattttactg
gttcatAGAAAAAGTGTATACTTTTATTCTCTTTAGCATTAGTCCAACTG
ATTTCTGTTCTTTTCCAGGGAATCGAATATCTCTTTAATTCGACTCAACT
AAATTCTTTGATTAAGTGTCTCAatataatagaccttatcggagtttttg
acttttctaaaaaagcgatgcattgtgggattgtttcgag
Run BLAST on NCBI

protein sequence of TCONS_00050759-protein

>TCONS_00050759-protein ID=TCONS_00050759-protein|Name=TCONS_00050759-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MEDTDKKPIHLGLLIPKEKKKKIKLPERIADLCLIENIKITEVDIHGDLE
SQGPFDVFFHKVVDIHKDGLSLEETENLIQKTVEYSKRHPEMVVVDDFEV
VIKLMKRQYQVEILNQCSMTVDGVSVYVPKTVEIPENTALDVCRELIERS
GIKFPILAKPLASCLDGAHDMKIVFSHEKLSDLPVPCLLQEFCNHGGVIY
KVFVIGDRVSMCERPSIQNIDCDPNQPSLVFDTRNVSKTGRAFIPELHGT
DPNARAWLSGEENPNMLNKTVIQAIVERLFNVTRFRXDCYPGYRGTTFQS
NTISYVWFRYFEGFRRELRFGRFESFSWVLRYQR
Run BLAST on NCBI

transcript from alignment at scaffold_185:229640..243715-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050759 ID=TCONS_00050759|Name=TCONS_00050759|organism=Clytia hemisphaerica|type=transcript|length=14076bp|location=Sequence derived from alignment at scaffold_185:229640..243715- (Clytia hemisphaerica)
GGAAATATTTGCCTCGATGGTTCAAATAGAAAACGTGTTGTTTTCATGTT
GGATTGACAAGGCTTTGTTTTGAATGAAAACGAAAGTGTATGTTCCAATA
ATTACTTCCTTCTTTTTCTGTTGATGTCGTCACCACAAATTAAGGTAATA
AAAAACAACTTTTATGATGATGTGTTTGATGTTCATTTGAGCATTTCTCC
ACTCTAGATCATTCTTTTTTACCATTTCTGTTTTCCTCATTTTTCAACTG
AAATAAAAATAATTAGGTGCCTAAAATTGAAAAATAAAAATTCTAAAAAC
ATGCGCAGATAAAATCCAATTTTAATCCATTTTTCCTCCTGGACGACATG
AAATTTCTGTAAAAAAGTCCAATAAAATTTCTTAGAAATTAGCAACCTTC
AATACTGGCAATACAGGGTGGTGTTTTTTCACAAAAAAGTATACTCAAGA
CTTTAAACCAGGCGTTGTCAACTGACAGGGATAGTTGTTTAAAAGAATGT
CACGGTCTTTTGAATTAAAAAAAAATTCTCCATCATACATTACTTTCCCT
CAGCTAATACGAACAGGACAGGTAAATTATCTTGTCTTGTGAAAGGCAAA
TCAGTCATGAAGTTTTTATTTTTATAAAAAAATTATGCTGAAGAAATCAT
TTGTTAGTTATTCAAAAGACCGTCATGTTCTCCAAAACAACTATTACCAA
ACCTGATCAAAGAGTTTGATACTGTAACTTGGTCTAATGTTGACATCCCT
AATCTAATACAACTTATCCATAATTCGCAAAACAGATGCTCAGGCAGGAA
TTAGGAAATTGTTTTGATGGTCTCTGGCAGTTAGTCACACTAGCGTCCCG
CCAAAATGCGTATCAAAGATTATTGATGCGAAAGCGCTATATCGTTTACT
TGACTCTCAAGCAAAGAAATGCGCCGCAAAACTTCTAAGGGGATTCATGA
AAAAATAACCCGGCGCTTTTTAATGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTC
AAGTAACTCTCATCCTTGTTGTTGAAATGTATCCTGTAGATGACTGATGT
TGTTTTTTCTGAAAGCTTAATTTCCTAGTGTGACTAACTGTCTGGAGTTA
AACAAACCTGTTTTTGCCTATGTCTCCTTAAGGAAAGTTTGTTTTTTGAG
CTTTTCCTAAGTTCTGTCGATCAAAAGTATAGTCAAGAGGCGCTGTGGTT
GCTGCACAGGCGACTGAGGTTCAATTCCCACTCGCATCGGTTCACTTGGC
AAGTGAACGAACCTTCGCCCGGGTCAACCCATGCCATGTGAGGGGAATTG
GGTAGTCAGTTGAAGGTGCTGACGGGGCGCTAATCGAAAGCGTCTATAGT
TGCGAAAATGGGCTTCAAAGCCTCCTGCGACTCAACCAAATAGAAATAGA
AAGAAAAAATCCACTCTAATTTTAGTATGTTCTTTCTATTTCATGATATT
ATACCCTAAATTTTTTTTGCCAAAAAAATATCACTATCAAAAGTTAGTAG
CTGAAAACCCACTTTCCCTAACTCCTTGCAGGCAAAAACACGTTTGTTTA
CCTCCCAAACAATTTGCGCATATTTTCCCGGGCCATTTCTAAGGAGTTTC
AATTAAGGGAAAGGTGTATTCCGACACCCATTTTTTAGAGCGGAAAATAA
GAGAAAGGTTGAAACTTTTTTTTTTGCTTATATACTGGTCAGAGAGAAAA
AATCCTTTTTCAATCAGTGATTCCAACTTTCATGTTATCCCTATCTTTTA
AGAAGTTTCTCAAAATTAGACAAGTGATGTCAATATTAGACCAACTCAAG
GTAACAGTACAGTTTTTTCGTTTTATGAAGTTTAATTAATGTTCGATAGG
GTTCGATTGATGTCCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTTATCGTTAGAGGCAATCGAGCAAGAA
CAATAGAAAAAATCTTTATTTGGCTCTGTAGAAAAATTGCAAAATAGAAA
CTCGCTTAAATTCGCAATACTGATTCTTTACCCCAAAACGAAAGNTCTTT
ATTTTTCTAGTGTATTTTGTTTTTTCGTTTTAGAAGAAATACTATACGGT
AGAAAATAAGGTTTTATACTATTATTTTTAAATTTTAAATGCCTATTATA
AAGAAAAAATTCGTAAGTGGGCGGAAAAATAAAAACGCCTTTGTTTTGAA
CGCCCGACTGCAAAAATCTCGGGATTCTGGGACTTCTTTTGAGACGGGGG
TTAGACATGAAAACAAAGAGCTAAGTAGAATAGTAGAATCGACTTTTTCA
AACTTTAAATAGAGTGTGTAAAGTATTTTTGTAATCAAACATTATATTTT
AAGTAATATTTCGTTATAAGCAAAGATAACTTATTCGGAAATAAAAAGTC
TTCATTCTTCGACCCCCGGATTTTTCATCGCATAATTTCTACGGGAAATC
GAAAGTAATTTCATTCGGCTTGTGATGTTTGAGAGCTTGGATGTTGGGAA
GCTGCAGGAATAAGGGTAAACAAATTATAGTCTTTTTTCTGAAAGAAAAA
TTAACATTAGTCTAGGCTGCCAATGAGTTCTGTGAGTCTGATTTATAAGT
TTGATGTGCTTCGTTGATTGCACACATGTTTGGTTGATTCTTTTCTTTAC
CTGTCAAAAAATTACAAGGTTGTTTAATCAAATGAAAACGGTTTGAATTA
TGATTTGTTGAAGAGTTTTTTATCGTAAAGCTCTGGAAGCCAGCCCAACT
TTTTGAAGACTAATCACCAAAAGAATGTAGTTTTCACCACAAGTCAAAAA
ATGCTACAATCCATCTCGATAGGGATGAGGCGAAAATAAAAAAATGCAGT
GTTTCAGGAATGCGGGTGAAGGAAAAAAGCTCTCATGCAGCCGGCCGGAA
AGAAAATTTTGTTTTGCTATTTTTGATAACTTAAGATCATTGAAATTGAA
CTTTAAAGATAACTTTTATGTACAAACAGTATGAAGTAAAGCCCTGAAGA
ATACTAATGTATCAGCTACTAGTGAACAAAACTTGATTTATAAGCGGGAA
TATCTAACCAAACGACGTTTGATAGCTTGAACGGTCAACTTGGTTTATTT
ATGATGAACCATATAGATGAACCCATAGTCTGCTTTTTTTCACCCCGCCG
GATTACGGAAACACTACATTCTTTTATTTTCATCTGAGCTGAAATTTTTT
TCAAATGCTTCACTCATTGGTCATTTGAAGTAATAGAGATGAAATTTTCT
TTAGAAAACGTAATGAATTCTTTCTCTCTCTTTTTCTAAAATTAACAACC
AATGAAATCATAAAAGAGTCCCATCCAAAGAGATAGATATTGGCCCACCC
TAAGCTTAAGCGAGGACGACCCCAAATATGGCATTGGAATATTATATAGA
TAAAAGAATTTTAATAAGTATTTTAAAGCTGTAATGTACGTTTTCAGTCA
AAATTTGATGTTAATTGCTTTTATAAATTTGATGTTATCATTGTTTTTCA
ATAATGACATTGTTTGAATTTTGTTTGATTTTGTTTTGAAATTTCACTTT
TTGCTATAAACATGAAATTTATACCAAACTTGAACATCATTAAAAGGATT
ATTTTGAAAAAAAGATATTTTGGAATTTTGCTGATGTCAGCACTTCATTG
CAAAATTTCGAATTTTGCTGATTTCTACTGACGTCAGCAAGATTTGAAAA
AAACCTTTTGTGCAAAATTGATCCTTTTAATGATGTGCAACTTTGGTTCA
AATTTCATGTTTATATCACGAGCCAAACTGGAGTTATTTAAAAGACAAGT
TTTTCTGACGTCAGCATTTTTTGGTTTTTGCCTAATATCTTTTTTTGGGT
CAAGAAATCAGTTATTACACAGCCATTCCAGTGATCTACTACACTCCAAT
ATGCTTCTTTCGATGTATGTAGTGATATGATTTGATAAGTGGGAACGGTG
ATAAAAAATTACGGTAATTTTAGACATGCCTTAATTTTCCCAAGAAGGCC
TAAATTTGCTATGGTGTTGACAGTCATTGAATAAAAAACAGTATTTTTTC
CATAGAGATTGTTTTCACCTGTTTTTGCAGGAAATATGTTTCTCTTTGTG
ACTTTGTTTTGGCATTGATGCAGGATCTTTTTATAAATTATTTTAGAACT
TTTTATATTTTTTAAAAATATTTTTCAAACACCAATGACATCTTTTGCCA
TAACAGGTCAAGAAATTTTGCTGATTCATCATTTTATCATAAAGAATTGA
TATTTTCAGTAATAATAAAAAGTAAGAAACGCATTTTTTAACATCAGCCT
GTATTCTTGATATGTGTAAGTCAAAATTACGTCATTTTACCTATCGGAAA
CACCCAAAAACACCAGAATTTGACGCATATCAAGAAAAACCTGGAAATAT
ATGAGCAAATGCATTTTTGCTTGTGATGGCTTCCATTTGTTTGGGAAAAA
TTCATGAATATAGCTTTTATTGATTGTGTTGTCATGTTGAGTAATTAAGA
CTTAGTGTGCTTGTGATATATAAAGTGCTTCTCGCATCATCCAATGCAAT
CCAAGGGTGTTCTCTAATGTAATGAAAAAGTTGTTTTGTATAAAAAGATG
AAATATAATGTGTAATGGAGTTTTTCTCTTAGATCTTTAGTCACCTCACT
CACCAAGTTAAGCCCAAAATAAGTCAAAGTTAATTACACCTAAAAGATCT
ATATTTTGTATTTCATGTTGAACAGTGAAAAAGGATGCGGTTGTTATATT
TTGTATTTCATTACGATTTTCTCAAATTTTAAAATTTGATACTGTAGCAA
TTTATGCTATGAGTGTCAGTTTACAAGTGAGAATTCTTTTTCACACTTTT
CCTTTCAAGGTTTAAGCAATTCAAATCCACTGATTCTCTCATGTTGAAAC
TTTTTCATTGATGAAAAAAATTTTATATATACTTTTAAAGCTGTGCAATT
CTTGAAGATTTTATGGAAGTGTATAAAAGCCACAGCCATATATTTGTTCA
AAGGCTTTTTTAAATGTGTTTTTGAGCTTTTATTTCCTCTGATAAGAAGT
AGGCGTTTTTATCTACAAATTTTGAGGGAAAATGATAACAAATATTTTTA
TGCTGATTGTGTTTAAAGTAAAGGTTTTTAATAAGAGTGGATATGTTTTA
CCGTTTTTGCTCATTAAGCATTGATTTTTTCTAGAAAACGTTTAAAGACA
CTATATTTGGTATTTTATTGCTATTGCAAAAGATGAAATAAGCAATTAAA
AATGGTGCCAGGCTAATATATTTTCAGTTATAAAATGTAGAACAGAATAT
TTTTAACAGTCTTCTTACAGTCATTTTGGTGTTTAAACTTTATCATTTTC
AGAGAACAACTTTGTAAAACATGGACTTTGAAGTTAAACCAATACATTTG
GGTGTTCTAATGCCTTGTAAAAGGAAGAAAATTATACCAGAGTGTATCCA
AGATCTATGTGATCAAGAATCAATCAAAATTACAAAAATTAATCTTGACA
ATAACATGGAAGATCAAGGGCCATTTGATGTTATCTTACACAAAGTTTCA
GATCTTTACAAGAAAAATTCAAGTTTTGAAAAAGTTGAACAGATGATCGG
AGTATTGTCGAATTATGCTCAACGCTTTCCTAATACGTACGTTATTGATG
ACTTCAAGCTTGTCCAAAGGCTAATGAACCGTAAATATCAATTAGAGATT
TTGAAGGAATGTGCTTTAAACGTCAATGGTATTTCAGTGTATGCACCTAA
ATCTTTAGAATTATGTGATTTGGACAACAATCTTTCTACTATCGAACATA
TGCAGAAACAGATTTTATCTTGTGATATGAAATTTCCTATTTTGGTGAAG
CCGTTACCAGCCTGCAAAGCGGTAGATGCACACAAGTTTATTATTATTTT
TTCCATGGAACAGTTACGTGATATTACATACCCTTGCTTATTGCAAGAGT
TTTGTAACCATAGTGGTGTTTTGTATAAGATGTTTGTCATTGGAGATCAG
ATAAGTGTCTTTGAAAGACCTTCTGTAAAGAATATAGAGTGTGTTAACAA
ACAAAACAGTTTAACTTTTGATACAAGACAAATATCAAAAATAGGGAATA
ATTTTAACCCAGAACTACACGAACGAGATCCTAGGACACGAACATGGCAT
TCTTATGAGGAAGACCCTCTTTTGCTTGATAATGTTGTGCTTCGGGCTAT
TCATAATAAGATATCTGATTATGCGGATTTGAAATTATATGGAGTTGATA
TATTGAAAGACCTTCAAGGAGATTATGCTGTTGTAGACTTGAATCATTTT
CCTGGATATACAGGTGTCAGAGAACAGCAATTTTCAAAAGATATTGTCAG
GATGGTAAAGCAATGTGCCAAAAAGGGGAAGCATTAGCTTTCTTCCACAA
CCTCTAGAACAATGTTCGGGGTTAAATTTTAGTTTCCAGGGGTTCCATGA
TGCTTTCTCAAGTGACAAAAGNCTTGACAATAACATGGAAGATCAAGGGC
CATTTGATGTTATCTTACACAAAGTTTCAGATCTTTACAAGAAAAATTCA
AGTTTTGAAAAAGTCGAACAGATGATTGGAGTATTGTCGAATTATGCTCA
ACGCTTTCCTAATACGTACGTTATTGATGACTTCAAGCTTGTCCAAAGGC
TAATGAACCGTACATATCAATTAGAGATTTTGAAGGAATGTGCTTTAAAC
GTCAATGGTATTTCAGTGTATGCACCTAAATCTTTAGAATTATGTGATTT
GGACAACAATCTTTCTACTATCGAACATATGCAGAAACAGATTTTATCTT
GTGATATGAAATTTCCTATTTTGGTGAAGCCGTTACCAGCCTGCAAAGCG
GTAGATGCACACAAGTTTATTATTATTTTTTCCATGGAACAGTTACGTGA
TATTACATACCCTTGCTTATTGCAAGAGTTTTGTAACCATAGTGGTGTTT
TGTATAAGATGTTTGTCATTGGAGATCAGATAAGTGTCTTTGAAAGACCT
TCTGTAAAGAATATAGAGTGTGTTAACAAACAAAACAGTTTAACTTTTGA
TACAAGACAAATATCAAAAATAGGGAATAATTTTAACCCAGAACTACACG
AACGAGATCCTAGGACACGAACATGGCATTCTTATGAGGAAGACCCTCTT
TTGCTTGATAATGTTGTGCTTCGGGCTATTCATAATAAGATATCTGATTA
TGCGGATTTGAAATTATATGGAGTTGATATATTGAAAGACCTTCAAGGAG
ATTATGCTGTTGTAGACTTGAATCATTTTCCTGGATATACAGGTGTCAGA
GAACAGCAATTTTCAAAAGATATTGTCAGGATGGTAAAGCAATGTGCCAA
AAAGGGGAAGCATTAGCTTTCTTCCACAACCTCTAGAACAATGTTCGGGG
TTAAATTTTAGTTTCCAGGGGTTCCATGATGCTTTCTCAAGTGACAAAAG
NGAACAATGTTTAAATTTTAGTTTCCAGGGGTTCCATGATGCTTTCTCAA
GTGACAAAACATACACGTGGCTACAATCATGGACAAAATATTTGAGACAA
AGGGGATTTCCCGGCGAAATTTTAAACACCACAAATGATTTTTAAGCGCC
TTAAACTACAGTTGGAAAGTAGAGTTTTAACTCTGAGTTTAGGACCTTAG
GATCTCAGGATTTAAAAGCTCAAATTTGCTCGAATAAGGCTTGGAATATA
GCCTAGAAGCCACCGAACCCCTCTAAAATCGAAATAATCAATGAAAGAAA
GTGGAAGTGCTAAAATAGCAATTCTCGCCCGAACTTTAAATTATGAAAAA
CTTTAAAATGCACTAAAATGTCAATATATTTCGACCATGATTGTAGGTGT
AAAAAATGGAATACGTTAATGGACAAATTATTGGAATAATATAATCCTCC
ATCCTCGGGAACGGATTTTTTCTGGAAGAGCCCACTGTTTTTAAAAGGGT
TTCCACCTACCTCTCTTCTTATACTTTTTAACTTTGTTTGCAAAATATCC
ACTATATAGAAAGCTATGTTTTGGCCTTTCCAGGTCAAAGACATTCTGCA
TTTTTATTTTAGATTTCTTTTTCTAAAGGATATAATCTTTGAAATTTTGA
AAATAAATCACTGCTATGAAGCGCGTTTTGTTTTATATTATTTGTCAAAA
TATTGATTCAAGTAGCAGGTTTTTTTTTGCTGACTTCCGCTGATTAATAT
TTCATGACCCATCATGTCATGTTTTGACAAGTTCTACTTTATGAAGTGTA
CATATGATGACAGATCTTTGTTATTGTTGTGTCAATTTCTTTGTTACGTT
ATAATGATTCCTTTATAATAGAATTTACACTTTGATACTTTTGTTAGCTC
TCTCTCTCTTTATGTTGATTTAGTGTAGTTTTAAGTTGAAAATTGACTTT
AAAAATCTGTTTTATTGGCTTTTGATAGCATGTACATTTCCTGCTTTTCT
TAGTTAAAGGTTTTATTTTTAAATAAGTGTACCCGTTTCATATCAGACAC
ATATTTCATATCAGGACAGTGTCTGCCTACAGTATTGTTATATTGTGCTG
ATATAAGCAATAAAATGTTTTTCTTTTCCTATTTCTGACCAATCTTGCTG
CACATCTGTGTCAATTCAATATCAAAAAGCTTGTAAATTAAAATTGATGA
GTAAGCAAAATCACTCTTATTTAAAAAAACCTTTAAGCATTCGTTTTTTT
AAATCCAAACATATATATGGTTTAAAACATTTTTTTGATGGGTTAACCTG
TTTAAGTTAAATTATTTTAATCTTTTGAAAATCCTGTCTAATACAGGTTT
ATGTCTGATTTGCAAAAACTGTAAATTCCACTTANGCGTTTTGTTTTAGA
TTATTTGTCAAAATATTGATTCAAGTAGCAGGTTTTTTTTTGCTGACTTC
CGCTGATTAATATTTCATGACCCATCATGTCATGTTTTGAGAAGTTCTAC
TTTATGAAGTGTACATATGATGACAGATCTTTGTTATTGTTGTGTCAATT
TCTTTGTTACGTTATAATGATTCCTTTATAATAGAATTTACACTTTGATA
CTTTTGTTAGCTCTCTCTCTCTTTATGTTGATTTAGTGTAGTTTTAAGTT
GAAAATTGACTTTAAAAATCTGTTTTATTGGCTTTTGATAGCATGTACAT
TTCCTGCTTTTCTTAGTTAAAGGTTTTATTTTTAAATAAGTGTACCCGTT
TCATATCAGACACATATTTCATATCAGGACAGTGTCTGCCTACAGTATTG
TTATATTGTGCTGATATAAGCAATAAAATGTTTTTCTTTTCCTATTTCTG
ACCAATCTTGCTGCACATCTGTGTCAATTCAATATCAAAAAGCTTGTAAA
TTAAAATTGATGAGTAAGCAAAATCACTCTTATTTAAAAAAAACCTTTAA
GCATTCGTTTTTTTAAATCCAAACATATATATGGTTTAAAACATTTTTTT
GATGGGTTAACCTGTTTAAGTTAAATTATTTTAATCTTTTGAAAATCCTG
TCTAATACAGGTTTATGTCTGATTTGCAAAAACTGTAAATTCCACTTATC
TATATCTATTTGGTTTGTGTGAAAAGTATACAGCTTGAATACAATAACTC
TTCATCACCGAGCTCTAAGATCAACGGAGGAAGTTAATCTAAAGAATCTT
ACATTTACTGAAAAAAAAGACAAAGAACTACAAATTAAAAAAAAAACTAT
AAATTTTAAAAAGAACTACAAATTTAAAAATGAATGAAAAATTCCGTAAT
CCACAGCCCCGACCCAGATAATTTGTCCACTGTAATGTTTTGATTTTTCT
TTGTTTTTTACAAAGATTAACTACATATGGTTTTATGAGCGAGAAATTAC
GCATGCGTGTTATAATGCAGGAATCCTCTTTACAAATACTTTTGTTGCAT
GTGTGCAACAATTTCCGTTAAGAAAAGAATCTGACCTTCGTCTTTTAATA
TGGTCAAATACACCCCTATCTAAAGACCCCGGTGAAACTTCTTTCCATAT
TGGGGAAAAAAATTTCTATCGGAATCCAATGATGATAAAAATTCTATCAG
TTCTTCCAATGGATTCAAGTGGGTATCAAAACAAATTTTCTCACCGGGAC
AGTATGAGTTGTCGAATTTCAAGTGGGGTCCCACTGGGTCTGTAACATAA
TGGTGCTAGACTTGTATGCTGTAGTAGGAGATTGCCTTGTTTCTCAAAAT
GGTGGCCTGAACTGTGGAACAGCATTTTACTAAATCATTTGAGGATGTCT
ATTCTAGTCTAAGATTTAGAGCTCTTTGATATTTTATCTTTAGTGGTTTC
TGCTATTCAAAACATTCTTTAACATTCAAAATCTGAGGCATTTGCAAGGG
GGATACCATTATATGATGTGATAGTCTTACCGCTAGTTTCTCTTGTAAGT
GTTTCTCTTTTTGATGTGATAAGATCAGTTTTATCTCGAGTTTTATTTCG
CGCGTTTGTGTTTCGAAACCAGTAGCATATATCAGTCAGTTATTATAGAA
AATTGTCTGAGAAATTGAAGTGACATTATTGGTCTCAAATAAGATAAAGT
TTTTATAAGATACTTTAATAATTGGTTATTTTTGAAGTAATTAGAATGAC
GCGTTCTTTAGGAAAAGTCACAAAATTGTTCTATTACTGGTTGACGATCA
ACCAAATCAAATAAAAGCTTGTAAAAACTCCATCTTGTCCCTTTGGTCTC
AGCTCTTTTGTGTTTAATATTCCTAAATGTTTCTAAATTTATCAGAAATG
CTAAATCGGAACTTTGGCCATTAATGGTCGTGATTAGAAAAGAGCTCTTT
TTCGTGATCTTATATTTGAGTGAGTGAAAAGTAAAGTCAAGCCTGGCTAT
TTGAATATTTTACTTAAATTATTTAATCAGTCGAAGGATACTTGAAATTT
GAAAGCTTGCTCAGGGGTAGATTTACCATCTTGTATAGATTATAGGGGTA
ATTTTTATCAGTTTATACTCGATATGTATAGATTGTAGGGGTAATTTTCA
TCAGTTTATACTCGATAATGAGTATTCCTAAAAGTCATAAGTGTAAAATA
ATTTATTCTCTCGAGATTTATAAACCAACCAAATCAAGAGCAAAGAGAAT
TATCTCAGGTCTTTCCTGGCAATCAAACCCTAACCATAAACTCTTTTGCT
GGATTGATTTCAGGACTAGGTTTCCGGGCTCTGAAATGTTTTGCCTGCTA
AAATTAACGTTATTTTTTTCCTTTTTTTAGCATTGCTCATTCAAATATGG
AAGACACAGACAAGAAACCAATTCACCTTGGTTTGCTTATACCCAAAGAA
AAGAAGAAGAAAATTAAGCTACCTGAACGTATAGCAGATTTATGTTTGAT
AGAAAATATCAAGATTACTGAAGTGGATATACACGGCGATTTAGAAAGCC
AAGGACCTTTTGATGTGTTTTTCCATAAAGTTGTGGATATACATAAAGAC
GGTTTAAGTTTGGAAGAAACAGAAAATCTAATACAAAAGACTGTTGAATA
TTCGAAACGACATCCTGAAATGGTGGTTGTGGATGATTTTGAAGTTGTTA
TTAAGTTAATGAAAAGACAATATCAAGTCGAGATACTGAATCAATGCTCA
ATGACTGTCGATGGTGTTTCTGTTTACGTACCAAAAACTGTTGAGATACC
TGAAAACACAGCCTTAGATGTTTGTCGCGAACTTATCGAAAGATCTGGAA
TCAAGTTTCCTATCTTGGCCAAACCTTTGGCTTCTTGTCTCGATGGTGCG
CATGATATGAAGATCGTTTTCAGTCATGAGAAACTATCTGATTTACCGGT
GCCGTGTCTTTTGCAGGAGTTTTGTAACCATGGTGGTGTTATATACAAAG
TGTTTGTGATTGGGGATCGTGTCAGTATGTGCGAAAGACCCTCCATACAG
AATATAGATTGTGATCCTAACCAGCCCAGCCTAGTTTTCGATACACGAAA
CGTTTCAAAAACGGGGCGTGCGTTTATTCCAGAACTTCATGGTACTGATC
CGAACGCCCGTGCGTGGTTATCGGGCGAAGAAAACCCGAACATGTTAAAT
AAGACTGTTATCCAGGCTATCGTGGAACGACTTTTCAATGTAACACGATT
TCGCNAAGACTGTTATCCAGGCTATCGTGGAACGACTTTCCAAAGTAACA
CGATTTCGTATGTATGGTTTCGATATTTTGAAGGATTTAGAAGGGAATTA
CGCTTTGGTAGATTTGAATCATTTTCCTGGGTACTCAGGTATCAGCGATG
AAACTTTTAAGCGAGACGTTGTAAACATGATTAAAAGTTGTGCTGGGTTG
TAAGTAAATGATACAATAAAGTATACTTTTCTTATACGAGAACAATTTTA
TAAGAACAATAAGGCTCAAAATCGCTAAAAAATGAGAACAATTTAAGAAC
AATTTTGTATAAAGCCTAAAATACCTCAATTACACCCTATAAGAAGAAAA
AGATAAGAACAGCCGAGCATCAGAAAAATTTTACTGGTTCATAGAAAAAG
TGTATACTTTTATTCTCTTTAGCATTAGTCCAACTGATTTCTGTTCTTTT
CCAGGGAATCGAATATCTCTTTAATTCGACTCAACTAAATTCTTTGATTA
AGTGTCTCAATATAATAGACCTTATCGGAGTTTTTGACTTTTCTAAAAAA
GCGATGCATTGTGGGATTGTTTCGAG

Coding sequence (CDS) from alignment at scaffold_185:229640..243715-

>TCONS_00050759 ID=TCONS_00050759|Name=TCONS_00050759|organism=Clytia hemisphaerica|type=CDS|length=1005bp|location=Sequence derived from alignment at scaffold_185:229640..243715- (Clytia hemisphaerica)
ATGGAAGACACAGACAAGAAACCAATTCACCTTGGTTTGCTTATACCCAA
AGAAAAGAAGAAGAAAATTAAGCTACCTGAACGTATAGCAGATTTATGTT
TGATAGAAAATATCAAGATTACTGAAGTGGATATACACGGCGATTTAGAA
AGCCAAGGACCTTTTGATGTGTTTTTCCATAAAGTTGTGGATATACATAA
AGACGGTTTAAGTTTGGAAGAAACAGAAAATCTAATACAAAAGACTGTTG
AATATTCGAAACGACATCCTGAAATGGTGGTTGTGGATGATTTTGAAGTT
GTTATTAAGTTAATGAAAAGACAATATCAAGTCGAGATACTGAATCAATG
CTCAATGACTGTCGATGGTGTTTCTGTTTACGTACCAAAAACTGTTGAGA
TACCTGAAAACACAGCCTTAGATGTTTGTCGCGAACTTATCGAAAGATCT
GGAATCAAGTTTCCTATCTTGGCCAAACCTTTGGCTTCTTGTCTCGATGG
TGCGCATGATATGAAGATCGTTTTCAGTCATGAGAAACTATCTGATTTAC
CGGTGCCGTGTCTTTTGCAGGAGTTTTGTAACCATGGTGGTGTTATATAC
AAAGTGTTTGTGATTGGGGATCGTGTCAGTATGTGCGAAAGACCCTCCAT
ACAGAATATAGATTGTGATCCTAACCAGCCCAGCCTAGTTTTCGATACAC
GAAACGTTTCAAAAACGGGGCGTGCGTTTATTCCAGAACTTCATGGTACT
GATCCGAACGCCCGTGCGTGGTTATCGGGCGAAGAAAACCCGAACATGTT
AAATAAGACTGTTATCCAGGCTATCGTGGAACGACTTTTCAATGTAACAC
GATTTCGCNAAGACTGTTATCCAGGCTATCGTGGAACGACTTTCCAAAGT
AACACGATTTCGTATGTATGGTTTCGATATTTTGAAGGATTTAGAAGGGA
ATTACGCTTTGGTAGATTTGAATCATTTTCCTGGGTACTCAGGTATCAGC
GATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032149XLOC_032149Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050759-proteinTCONS_00050759-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050759-exon-scaffold_185-1575043694:243572..243715TCONS_00050759-exon-scaffold_185-1575043694:243572..243715Clytia hemisphaericaexon
TCONS_00050759-exon-scaffold_185-1575043694:229640..231085TCONS_00050759-exon-scaffold_185-1575043694:229640..231085Clytia hemisphaericaexon
TCONS_00050759-exon-scaffold_185-1510915933:243572..243715TCONS_00050759-exon-scaffold_185-1510915933:243572..243715Clytia hemisphaericaexon
TCONS_00050759-exon-scaffold_185-1510915933:229640..231085TCONS_00050759-exon-scaffold_185-1510915933:229640..231085Clytia hemisphaericaexon
TCONS_00050759-exon-scaffold_185-1491911889:243572..243715TCONS_00050759-exon-scaffold_185-1491911889:243572..243715Clytia hemisphaericaexon
TCONS_00050759-exon-scaffold_185-1491911889:229640..231085TCONS_00050759-exon-scaffold_185-1491911889:229640..231085Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_185supercontigscaffold_185:229640..243715 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.97168	1.4919	1.05427	1.0472	3.80435	3.7686	10.3454	10.6612	3.45529	4.1637	2.87529	2.22586	3.28768	2.30259	3.03262	4.45249	4.30211	4.59692	4.24203	3.87664	5.10554	3.91844	5.43002	6.59884	2.51198	4.38649	7.21744	4.48507	7.85533	6.09381
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008656Inositol_tetrakis-P_1-kinase
Vocabulary: Molecular Function
TermDefinition
GO:0052726inositol-1,3,4-trisphosphate 5-kinase activity
GO:0052725inositol-1,3,4-trisphosphate 6-kinase activity
GO:0005524ATP binding
GO:0000287magnesium ion binding
GO:0047325inositol tetrakisphosphate 1-kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0032957inositol trisphosphate metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032957 inositol trisphosphate metabolic process
cellular_component GO:0005622 intracellular
molecular_function GO:0005524 ATP binding
molecular_function GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity
molecular_function GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity
molecular_function GO:0047325 inositol tetrakisphosphate 1-kinase activity
molecular_function GO:0000287 magnesium ion binding
Blast
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BLAST of TCONS_00050759 vs. Swiss-Prot (Human)
Match: ITPK1 (Inositol-tetrakisphosphate 1-kinase OS=Homo sapiens GN=ITPK1 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.866e-31
Identity = 67/216 (31.02%), Postives = 118/216 (54.63%), Query Frame = 2 
Query:  245 IADLCLIENIKITEVDIHGDLESQGPFDVFFHKVVDI-----HKDGLSLEETENLIQKTVEYSKRHPEMVVVDDFEVVIKLMKRQYQVEILNQCSMTVDGVSVYVPKTVEIPENTALDVCRELIERSGIKFPILAKPLASCLDGAHDMKIVFSHEKLSDLPVPCLLQEFCNHGGVIYKVFVIGDRVSMCERPSIQNIDCD-PNQPSLVFDTRNVSK 874
             A+LC    +++ ++++   +E QGP DV  HK+ D+       D  SLE    L+ +  EY   HPE +V+D    +  L+ R    E++ +    ++   +  P  +E+      D  R L+E++G+ FP + K   +    +H+M IVF+ E L+ +  PC++Q F NH  V+YKVFV+G+  ++ +RPS++N      ++ S+ F++ NVSK
Sbjct:   27 FAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVILEADQNDSQSLE----LVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFMELTSLCGDDTMR-LLEKNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSK 237
The following BLAST results are available for this feature:
BLAST of TCONS_00050759 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ITPK16.866e-3131.02Inositol-tetrakisphosphate 1-kinase OS=Homo sapien... [more]
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