TCONS_00050783 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050783
Unique NameTCONS_00050783
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length174

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050783 ID=TCONS_00050783|Name=TCONS_00050783|organism=Clytia hemisphaerica|type=transcript|length=174bp
ATCACATTTCATCTTATGTTTATATTTAGTGAGTTTTCTACTGGTTGATA
TTTTATATTGTTACGATATACCTTTTATAGGCTTATCTACTTTTActaat
agaaaattttttaaatttgtaggtACGCGCGTCTTCCTGCAACCGTTAAG
GCGCGACAAAAGTATAATTTGGGG
Run BLAST on NCBI

transcript from alignment at scaffold_186:115563..115736

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050783 ID=TCONS_00050783|Name=TCONS_00050783|organism=Clytia hemisphaerica|type=transcript|length=174bp|location=Sequence derived from alignment at scaffold_186:115563..115736 (Clytia hemisphaerica)
CCCCAAATTATACTTTTGTCGCGCCTTAACGGTTGCAGGAAGACGCGCGT
acctacaaatttaaaaaattttctattagTAAAAGTAGATAAGCCTATAA
AAGGTATATCGTAACAATATAAAATATCAACCAGTAGAAAACTCACTAAA
TATAAACATAAGATGAAATGTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032167XLOC_032167Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050783-exon-scaffold_186-1491911889:115563..115736TCONS_00050783-exon-scaffold_186-1491911889:115563..115736Clytia hemisphaericaexon
TCONS_00050783-exon-scaffold_186-1510915933:115563..115736TCONS_00050783-exon-scaffold_186-1510915933:115563..115736Clytia hemisphaericaexon
TCONS_00050783-exon-scaffold_186-1575043694:115563..115736TCONS_00050783-exon-scaffold_186-1575043694:115563..115736Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_186supercontigscaffold_186:115563..115736 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050783 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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