TCONS_00050801 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050801
Unique NameTCONS_00050801
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1302

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050801 ID=TCONS_00050801|Name=TCONS_00050801|organism=Clytia hemisphaerica|type=transcript|length=1302bp
TTGCGAAATTGCATCCAACAGCCAATTCAACATTTTGACTGTAGTTGAGA
ATGAAGTTCAGGTGATACTTAACAAGACGTGTTCAAAACAAGCAACATTC
GATGTCTTTGTATGGGATGGTGACTGGAAATCGTTGCATTCTTCTAAAGT
GGAATCTCTATTCACTGTTGAAGAGACTAACAATCAAGACCAGATGACAA
TCAGATTCACCAAGCATTTATCAGGGATCGTTATCAAGATCACCATCAAA
TGTCCAGAAGAAGCAGTCCTCTCATCTGACTGCTTTGTTGTTAAGTTCAA
TGGGTCGACTACAGAAATGGTGAATTTTGACCTGATCAACAAGATATTGG
AgccttcaacaacaacaacgacaactTCACCAACTCTTGATACACTGACG
TCTACAGATGAATCTGAGATCATGGTAATCGTTGGTTGTGCAGTTGGTGG
CTTGGTGTTGTTGCTGTTATTCATCCTCTGTCTTATTTGCATTGTCCGca
agaaaaagaaagctaaagaaaaacaacatcagAAGGCTATATTTATGAGT
GATGTCCAAGTATACGAAAACCCTTACAAAAGAAGTACCATCGGAAACCC
CACGTACGATAAAAAATTGCATTCAACAAGGGCCCATCCACACTGTGACG
ATCCTTACAATCAAAATCGAGAATACGCTGAAATCGATCCTTCAATCTAC
AGTTTACCGCTTAGTCAAAACCAACCCATAGAACATTCTAAACCCTATGA
ATTTATTGATGAAAATAAGACACGCCCACAAACTAATCACCCTTCCGGAA
GACCCGTTTCTGATCCGGTTTACAGAGAAATAGAGGGAGCGGAATATGAT
GAAATACGTAACGGAAAACCCGTTGTTCCGTTTCCAGCACCGGACTATCC
ACCGGGTGTTGGATTTTTAAACAACAACACTAGAGAACCTTTGTATAGAA
TCTTAGAAGAAAAAGACTGTGATTTTACAACAGGGCGGAATGATGTGGGG
CGTTCGACCTCCATTAGACATCCACCACCCGATTATTCTCCGCCCCCTCC
AACTGGCTGATATGATCGATTAGTATATAGTTgatcaaattttatatttt
cgaACAGATAATAATCACTTGTGGGGATTTTTGCCTCTTTTTACAAGAAA
CTCTCACACGAACATTTACAGTGCTTTGAAATCATGTAATCTATGTGTAA
ATATATAATTTAGAGATACGGTGACAAATCAAATCAACATATCTGATGAT
CTGAATATTTACTAATAAGGTAGTCTATTACTCAGAATAAACTGGTTTTA
AC
Run BLAST on NCBI

protein sequence of TCONS_00050801-protein

>TCONS_00050801-protein ID=TCONS_00050801-protein|Name=TCONS_00050801-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
CEIASNSQFNILTVVENEVQVILNKTCSKQATFDVFVWDGDWKSLHSSKV
ESLFTVEETNNQDQMTIRFTKHLSGIVIKITIKCPEEAVLSSDCFVVKFN
GSTTEMVNFDLINKILEPSTTTTTTSPTLDTLTSTDESEIMVIVGCAVGG
LVLLLLFILCLICIVRKKKKAKEKQHQKAIFMSDVQVYENPYKRSTIGNP
TYDKKLHSTRAHPHCDDPYNQNREYAEIDPSIYSLPLSQNQPIEHSKPYE
FIDENKTRPQTNHPSGRPVSDPVYREIEGAEYDEIRNGKPVVPFPAPDYP
PGVGFLNNNTREPLYRILEEKDCDFTTGRNDVGRSTSIRHPPPDYSPPPP
TG
Run BLAST on NCBI

transcript from alignment at scaffold_189:99923..106378+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050801 ID=TCONS_00050801|Name=TCONS_00050801|organism=Clytia hemisphaerica|type=transcript|length=6456bp|location=Sequence derived from alignment at scaffold_189:99923..106378+ (Clytia hemisphaerica)
TTGCGAAATTGCATCCAACAGCCAATTCAACATTTTGACTGTAGTTGAGA ATGAAGTTCAGGTGATACTTAACAAGACGTGTTCAAAACAAGCAACATTC GATGTCTTTGTATGGGATGGTGACTGGAAATCGTTGCATTCTTCTAAAGT GGAATCTCTATTCACTGTTGAAGAGACTAACAATCAAGACCAGGTCAGAA TGTATTTTGAGACCTGAACAAGTTGATTGAAATCCTTTAGTTGCTTTTCA CTCTTTTTAAAGTAGGATGCCTTAAAGACAAAGAATTCCCGTTAATTCAA ATCTGCCtattaattgaaattttcaggtcCGATTACCAAACAGCTAAGCA GTCTTTCTGTATGAAAGTCTTTTTCTTGTAAACTCCTTTCTCAAGCGCCT ACATACATAACTGATAAGTAATGCACTAAAGCTATTATACATTATAAATT TTTTGAGATGATGTAGTTTGCGATACATTTGAGAGTCATGTATGTATGTA CGTTTATCTTCAGATTGTTAAACCTTCTTTGATCTTACTTTCTATCAGAT GACAATCAGATTCACCAAGCATTTATCAGGGATCGTTATCAAGATCACCA TCAAATGTCCAGAAGAAGCAGTCCTCTCATCTGACTGCTTTGTTGTTAAG TTCAATGGGTCGACTACAGGTAATCCCTCTATAAAAATCGCTGTTTTGGA AATATCCAGTTTTGCTATCAATTTTAGCGATGGTTACTTTattgggataa attttcgcggataTTAAATTTCACGTTTGGACTTAtttgcgaaattttaa gatttcgttAAGTCCacggatggcactattgggaGACAAcatttttcacg attttgttctttttactgtcaaatcatgcattttGGTCCGCGAGAACTGC GAAGTTTTATCCCCTTATAATATTTTCCCCATTAAAATACTCGTGGTTGA ATGGACTAGTCTTGATCCAAGCCATCTGGTCGAATGATATTGATATTTTG ATTACACAAGACTTCTAGAATGGACATCATGTACTGTAATAAAAATTTGG TACGCTGCAAGTTCTGAAGGATTGGAGCCACTTCTTGAACGAAAGTTAAA AACAGGCTCCAAAAAAAAAGCACAAAATATTTCTCCCATTTTCAATTAGA AATGGTGAATTTTGACCTGATCAACAAGATATTGGAgccttcaacaacaa caacgacaactTCACCAACTCTTGATACACTGACGTCTACAGATGAATCT GAGGTACGGTCTTCGCTCActccatttttcaaaactttaacTGACAAAAT TCTCCATGATATAATACAtccatccctgtctcacagtccccTGTTAATCC TTTTCCAATAGCAGAGATAAAGTTTCCTATcgggatagaaattatattgt ttcaaGCTTACAATATCTAGTCGGGATGGTTTTTGAGTGTAATTTTTACA TTGAATgttgaatggggatgaaattaaagtcaatttcccagtggggctga aatggAAGGGTATTTTACGCACCGGGGACGACAATGTTGCCAAATTGTTc agcaggtctgtgacacaagggtgCTATAATTGATTGAACCTCAGGTTCAG ACAACACCCACCCCAAATTTTCTAATTCTCTTCCGTTTAAATGGGTATTG GATGTATGCATCCCAAACTCCTAATTTTATACATTAATTAAAAGTGAAAA CTTAGCCGGGCAAAGTTTTTCATCAGGATGAACCTGTCTAGAAATGTTTG TCAATTCAGNTTTTTTCTTGTAAGTTTAATCAAGATGAGATTTTATTCAA GGAGATTCACTCACTGAAAGTTTTAGCGGTTCATTTTATTACCTTTAAAG GTTTATTTTAGCGATACCGCAAAACGACCCTTTTAAggtacaaatttaaa aaaaacctaTAAGGTATTTTTTCATTGATACCTTACAGGTACTTTTAGGT ACCTTTTGAGGTATGAAAAAATACttccaaaagaatttttttgtccCCGA AAAGGTATTTTTAAGTCACCAAAAAGGTAATTTTCAAACGATACCGCAAA ACGACCCTTTTAGGGTAAAATTAGTCTGATATACCATTAATGTGCTTTAA AAACACCACCAAAAGGATTCAAAAGTGCCGAAAAAGCGGTTTTAGTTTTT ACCCACGGGGTTGTTTTTCATCACTTACATTGATGGTGCGAAGAAGGtat tttttttacctcctagatATAATGAATTTCCTATCATTTCTTCACTAGAA TAAGCGAATACTAATTGAACGAATAACTCATAAAGTTAAGGAGATCAAAG CTCCTCTCTTTATTTTTGTAGATTGGATTAAATGAAATTTACAATATTGA TAAATATAGAAGAAAGCCAAATGATTCAATAAATAGAATTAATTAAAtca taaattaaataaaaattacaattGACAAAAACTAGTAGGCCTATTCTATA TCACCTAATAATCATACACTATTTCCTACTATTCAGTAAGATTATTCAAT CTTTCTAATTTATTCACTGCCGTCATTTTTTCTGTATAAGACAGCAATTT CATAGGGCAACGTCGTCAGAGGATCTCCTGACTTTCCTATGGTGATGCCA TTCAGGTGAATGAAGAAATCTTGATCCTCAAAAGTGTCAGGGTTAGCATG GCCGATTCGAGGAGTGAGCGCGTTCGCGATTCCATAATAATTTTTGGTAT CTTCTCGAAATATTACCGGTAGATTAATACTCCCACAACAGCACATCGAT CTGTTGAAAAAGAAAGTTACATTCTGTAAAACTTTTGTTCATTATATTCT TACTTTCAATGATATTTCAATGATTCTATACGCATGTTGCAAAGTAACTT ATTAGATGCccggggcactgaccttgacggccgacggggacgtgccgctg taGTTTGAGAagttgaccctgtcagatatgaatttttgataaaattgggA CCCTATCTGaacgaaaaatttaaatttttcttctttccagttaatttggg accctgtcagatatcttaaGAGTCTTAAAAAGGGACTCTGACCAATGACA CGTCCCCATATCAAATTTTGCCTAATTGGCCCACTCCCCTGATTCAATTA GCCGAATTATGCTTACCTGTTCACCATTTGCAAGGTTTGGGTATATTTCA ATCAGAATTTTGACGGATTTGTGATCCTTGATCAGTTTTGCTCGTCGATC GTGCAGGTTAAGCTCCAAACGAGTCGTTCTTTTTACTTAGAGCAATAGGT TTGTGATTTGAGAGTTGCAATATGCTTTTGTACCGAATGTTGATCTTCTC CAGCAGGAATATTTGGGAGAAAGTTGACCAATCCCAAAAGTTTTTTGGAT CTCTTCAGCAgcgcaaaataaaagttaataaaGAATCTAGCAAGCGACTA AAATTCGGACTTTAAATAATTTGCGACTGAGAGCTTCGACCTGTCAGATT GACAGACAAAGCGCAAATGAGCGGCacaatcaaaaatttgatttttgaaa gagGCGGGAGTATGGGTTTCTCTCAGACTTTAAGGAGAATTTACTCTTTC TAGTTCTGGAACTATACCGCGGAAATATGATTGTTGTCATTTTCTCACAA CGTCCCGTCGTTCTCTCCGTCCCAGGACTCTTTGGGATGATACCTCAAAG AGCATCGATTTTATCAGAAAGGGTACGAATTTTTATCTCTAAGGTATCAA AGGTAGCGAAGCTCCATAGACACGATTGGGCAAGAATCATAGACGCGATT AAAAATACCTCTCAAGGTATTTTTTTGCCGCCTGTTTTCCCGcaagaaaa tattcaaaaatacctCAAAGGGTAAGAATTTGTATCTCTAAGGTATCAAA GGTAGCGAAGCTCCATAGACACGATTAGGCAAGAATCATAGACGCGATTA AAAATACCTCTAAAGGTATTTTTTTGCCGAATGTTTTCCCGcaagaaaac attcaaaaataccTCAAAGGGTACGAATTTGTATCTCTAGGTTATCAAAA GTAGCGAAACTCCATAGACACGATTAGGCGAGAATCATAGACGCGATTGA AAATACCTCTAAAGGTATTTTTTGTCGCCTTTTTNGCAAGAATCATAGAC GCGATTAAAAATACCTCTAAAGGTACTTTTTGTCGACTTTTCCCCGAGGC TTCAAAGGTAGCATAACTCCAACCCATGATAACATCTATGGAACAACCTT AGGCTAAAGGATAGCTTTTATTAAAAGTGAAATTAATTGAGCTTTAAAGG GTTTCAAGCGGAAATACGGTTAGAATAATAACTTTCAGAGTCTTGGATTA TAACAGTTCCCTAACACAGAGCATAAAATGTTCAATTAAAGACCTTTCAT GACCTGTCTTGCGTGCTCGTTCATGCCAAGCTAGACTCCTCAAGGTCTTG CCGTTCAATCTTAAGTTTTTTCAAACGACATCCCAAGGTCTTCCTACTGA GTGAATGAGAATCTTGACACTCTATACTTTATTGTTTATGAGATACCTAA GAGGTACATAATGATCCCTTTAGCGTTGAGGGGATCTTCAGAATTCTTTC GAAGGCTTTTTTCCTGCCCCTACGGTTACTATATTATACCTTGTTCactt tcgaatttttggaaatcccgAAAATCACTCAAAAGGTACAAAATAATTCC TACGGGGTGTTTTAAAATTACCTTAACGGTGTTTTTTAAAATCGTGCCAC AGAAGGTATCATTTTAATCCTTAAAGGAATATATTTATTCCCGAAAAGGA ACAAATTTGTTATCTAAAGGTAAACGCGATTATTAGAACCTCTAAAGGTA CTAAAATGAACCGCTAAAACTTTCAGTGAGCTATACAAAGTTTTCCATTT TGACCATTTCTGATTTCAACATTAGATCATGGTAATCGTTGGTTGTGCAG TTGGTGGCTTGGTGTTGTTGCTGTTATTCATCCTCTGTCTTATTTGCATT GTCCGcaagaaaaagaaagctaaagaaaaacaacatcagAAGTAAGTTTA ACATCTATCAACCCTGTCGCTGACATACTTTTATTAAAtccactgggagt taatcacgCGCTTATCTtgacggacgataacatcgtctagtgTGAAATGT ATGAAGACATTGTATTGAAATGCTCACCGGTAAACCCTAAAAAACTCAAA CCCCATTCCCTTTGAAACGTAAGAGTTAAAAGGTGTACTTGCATTTGGAG GGACATTGACATTGAAAACTCGCTTATTTAACAGACCCCTTAAAAACTAG AAACTACTCAGATAAATGTGTGCATGAAGTTAATGGGTGCCTCGAGACTC CTTACGTTTGGGTAATACTGTGTATACACGATTAgtcatcaatcaatcaa atgtTGCAGTTTTTCCATCCCATGTGAAATTTAATTTAGTTTAACTTGTT TTATTGCGTTTCCAGGGCTATATTTATGAGTGATGTCCAAGTATACGAAA ACGTAAGCATTTTTATCGTTTCATTTACATAAAgtacttaaaggttttat ttttgcatAAATATTCCAGTTCAATATCAGGACAGtctctgcctattgtt atattatgctgatataaacaaaaaaaaattttcttttcctctttctgacc aatcttgctccacatccatgtcaatccaatgtgaaaaagcttgtaaatca aaattaatgagaaagcaaacgatatcactcttatttaaaaaacaaaaatc aaatattCTTCGTTTACAATTTCAGCCTTACAAAAGAAGTACCATCGGAA ACCCCACGTACGATAAAAAATTGCATTCAACAAGGGCCCATCCACACTGT GACGATCCTTACAATCAAAATCGAGAATACGCTGAAATCGATCCTTCAAT CTACAGTTTACCGCTTAGTCAAAACCAACCCATAGAACATTCTAAACCCT ATGAATTTATTGATGAAAATAAGACACGCCCACAAACTAATCACCCTTCC GGAAGACCCGTTTCTGATCCGGTTTACAGAGAAATAGAGGGAGCGGAATA TGATGAAATACGTAACGGAAAACCCGTTGTTCCGTTTCCAGCACCGGACT ATCCACCGGGTGTTGGATTTTTAAACAACAACACTAGAGAACCTTTGTAT AGAATCTTAGAAGAAAAAGACTGTGATTTTACAACAGGGCGGAATGATGT GGGGCGTTCGACCTCCATTAGACATCCACCACCCGATTATTCTCCGCCCC CTCCAACTGGCTGATATGATCGATTAGTATATAGTTgatcaaattttata ttttcgaACAGATAATAATCACTTGTGGGGATTTTTGCCTCTTTTTACAA GAAACTCTCACACGAACATTTACAGTGCTTTGAAATCATGTAATCTATGT GTAAATATATAATTTAGAGATACGGTGACAAATCAAATCAACATATCTGA TGATCTGAATATTTACTAATAAGGTAGTCTATTACTCAGAATAAACTGGT TTTAAC

Coding sequence (CDS) from alignment at scaffold_189:99923..106378+

>TCONS_00050801 ID=TCONS_00050801|Name=TCONS_00050801|organism=Clytia hemisphaerica|type=CDS|length=6354bp|location=Sequence derived from alignment at scaffold_189:99923..106378+ (Clytia hemisphaerica)
TGCGAAATTGCATCCAACAGCCAATTCAACATTTTGACTGTAGTTGAGAA
TGAAGTTCAGGTGATACTTAACAAGACGTGTTCAAAACAAGCAACATTCG
ATGTCTTTGTATGGGATGGTGACTGGAAATCGTTGCATTCTTCTAAAGTG
GAATCTCTATTCACTGTTGAAGAGACTAACAATCAAGACCAGATGACAAT
CAGATTCACCAAGCATTTATCAGGGATCGTTATCAAGATCACCATCAAAT
GTCCAGAAGAAGCAGTCCTCTCATCTGACTGCTTTGTTGTTAAGTTCAAT
GGGTCGACTACAGAAATGGTGAATTTTGACCTGATCAACAAGATATTGGA
gccttcaacaacaacaacgacaactTCACCAACTCTTGATACACTGACGT
CTACAGATGAATCTGAGATCATGGTAATCGTTGGTTGTGCAGTTGGTGGC
TTGGTGTTGTTGCTGTTATTCATCCTCTGTCTTATTTGCATTGTCCGcaa
gaaaaagaaagctaaagaaaaacaacatcagAAGGCTATATTTATGAGTG
ATGTCCAAGTATACGAAAACCCTTACAAAAGAAGTACCATCGGAAACCCC
ACGTACGATAAAAAATTGCATTCAACAAGGGCCCATCCACACTGTGACGA
TCCTTACAATCAAAATCGAGAATACGCTGAAATCGATCCTTCAATCTACA
GTTTACCGCTTAGTCAAAACCAACCCATAGAACATTCTAAACCCTATGAA
TTTATTGATGAAAATAAGACACGCCCACAAACTAATCACCCTTCCGGAAG
ACCCGTTTCTGATCCGGTTTACAGAGAAATAGAGGGAGCGGAATATGATG
AAATACGTAACGGAAAACCCGTTGTTCCGTTTCCAGCACCGGACTATCCA
CCGGGTGTTGGATTTTTAAACAACAACACTAGAGAACCTTTGTATAGAAT
CTTAGAAGAAAAAGACTGTGATTTTACAACAGGGCGGAATGATGTGGGGC
GTTCGACCTCCATTAGACATCCACCACCCGATTATTCTCCGCCCCCTCCA
ACTGGCTGATGCGAAATTGCATCCAACAGCCAATTCAACATTTTGACTGT
AGTTGAGAATGAAGTTCAGGTGATACTTAACAAGACGTGTTCAAAACAAG
CAACATTCGATGTCTTTGTATGGGATGGTGACTGGAAATCGTTGCATTCT
TCTAAAGTGGAATCTCTATTCACTGTTGAAGAGACTAACAATCAAGACCA
GATGACAATCAGATTCACCAAGCATTTATCAGGGATCGTTATCAAGATCA
CCATCAAATGTCCAGAAGAAGCAGTCCTCTCATCTGACTGCTTTGTTGTT
AAGTTCAATGGGTCGACTACAGAAATGGTGAATTTTGACCTGATCAACAA
GATATTGGAgccttcaacaacaacaacgacaactTCACCAACTCTTGATA
CACTGACGTCTACAGATGAATCTGAGATCATGGTAATCGTTGGTTGTGCA
GTTGGTGGCTTGGTGTTGTTGCTGTTATTCATCCTCTGTCTTATTTGCAT
TGTCCGcaagaaaaagaaagctaaagaaaaacaacatcagAAGGCTATAT
TTATGAGTGATGTCCAAGTATACGAAAACCCTTACAAAAGAAGTACCATC
GGAAACCCCACGTACGATAAAAAATTGCATTCAACAAGGGCCCATCCACA
CTGTGACGATCCTTACAATCAAAATCGAGAATACGCTGAAATCGATCCTT
CAATCTACAGTTTACCGCTTAGTCAAAACCAACCCATAGAACATTCTAAA
CCCTATGAATTTATTGATGAAAATAAGACACGCCCACAAACTAATCACCC
TTCCGGAAGACCCGTTTCTGATCCGGTTTACAGAGAAATAGAGGGAGCGG
AATATGATGAAATACGTAACGGAAAACCCGTTGTTCCGTTTCCAGCACCG
GACTATCCACCGGGTGTTGGATTTTTAAACAACAACACTAGAGAACCTTT
GTATAGAATCTTAGAAGAAAAAGACTGTGATTTTACAACAGGGCGGAATG
ATGTGGGGCGTTCGACCTCCATTAGACATCCACCACCCGATTATTCTCCG
CCCCCTCCAACTGGCTGATGCGAAATTGCATCCAACAGCCAATTCAACAT
TTTGACTGTAGTTGAGAATGAAGTTCAGGTGATACTTAACAAGACGTGTT
CAAAACAAGCAACATTCGATGTCTTTGTATGGGATGGTGACTGGAAATCG
TTGCATTCTTCTAAAGTGGAATCTCTATTCACTGTTGAAGAGACTAACAA
TCAAGACCAGATGACAATCAGATTCACCAAGCATTTATCAGGGATCGTTA
TCAAGATCACCATCAAATGTCCAGAAGAAGCAGTCCTCTCATCTGACTGC
TTTGTTGTTAAGTTCAATGGGTCGACTACAGAAATGGTGAATTTTGACCT
GATCAACAAGATATTGGAgccttcaacaacaacaacgacaactTCACCAA
CTCTTGATACACTGACGTCTACAGATGAATCTGAGATCATGGTAATCGTT
GGTTGTGCAGTTGGTGGCTTGGTGTTGTTGCTGTTATTCATCCTCTGTCT
TATTTGCATTGTCCGcaagaaaaagaaagctaaagaaaaacaacatcagA
AGGCTATATTTATGAGTGATGTCCAAGTATACGAAAACCCTTACAAAAGA
AGTACCATCGGAAACCCCACGTACGATAAAAAATTGCATTCAACAAGGGC
CCATCCACACTGTGACGATCCTTACAATCAAAATCGAGAATACGCTGAAA
TCGATCCTTCAATCTACAGTTTACCGCTTAGTCAAAACCAACCCATAGAA
CATTCTAAACCCTATGAATTTATTGATGAAAATAAGACACGCCCACAAAC
TAATCACCCTTCCGGAAGACCCGTTTCTGATCCGGTTTACAGAGAAATAG
AGGGAGCGGAATATGATGAAATACGTAACGGAAAACCCGTTGTTCCGTTT
CCAGCACCGGACTATCCACCGGGTGTTGGATTTTTAAACAACAACACTAG
AGAACCTTTGTATAGAATCTTAGAAGAAAAAGACTGTGATTTTACAACAG
GGCGGAATGATGTGGGGCGTTCGACCTCCATTAGACATCCACCACCCGAT
TATTCTCCGCCCCCTCCAACTGGCTGATGCGAAATTGCATCCAACAGCCA
ATTCAACATTTTGACTGTAGTTGAGAATGAAGTTCAGGTGATACTTAACA
AGACGTGTTCAAAACAAGCAACATTCGATGTCTTTGTATGGGATGGTGAC
TGGAAATCGTTGCATTCTTCTAAAGTGGAATCTCTATTCACTGTTGAAGA
GACTAACAATCAAGACCAGATGACAATCAGATTCACCAAGCATTTATCAG
GGATCGTTATCAAGATCACCATCAAATGTCCAGAAGAAGCAGTCCTCTCA
TCTGACTGCTTTGTTGTTAAGTTCAATGGGTCGACTACAGAAATGGTGAA
TTTTGACCTGATCAACAAGATATTGGAgccttcaacaacaacaacgacaa
ctTCACCAACTCTTGATACACTGACGTCTACAGATGAATCTGAGATCATG
GTAATCGTTGGTTGTGCAGTTGGTGGCTTGGTGTTGTTGCTGTTATTCAT
CCTCTGTCTTATTTGCATTGTCCGcaagaaaaagaaagctaaagaaaaac
aacatcagAAGGCTATATTTATGAGTGATGTCCAAGTATACGAAAACCCT
TACAAAAGAAGTACCATCGGAAACCCCACGTACGATAAAAAATTGCATTC
AACAAGGGCCCATCCACACTGTGACGATCCTTACAATCAAAATCGAGAAT
ACGCTGAAATCGATCCTTCAATCTACAGTTTACCGCTTAGTCAAAACCAA
CCCATAGAACATTCTAAACCCTATGAATTTATTGATGAAAATAAGACACG
CCCACAAACTAATCACCCTTCCGGAAGACCCGTTTCTGATCCGGTTTACA
GAGAAATAGAGGGAGCGGAATATGATGAAATACGTAACGGAAAACCCGTT
GTTCCGTTTCCAGCACCGGACTATCCACCGGGTGTTGGATTTTTAAACAA
CAACACTAGAGAACCTTTGTATAGAATCTTAGAAGAAAAAGACTGTGATT
TTACAACAGGGCGGAATGATGTGGGGCGTTCGACCTCCATTAGACATCCA
CCACCCGATTATTCTCCGCCCCCTCCAACTGGCTGATGCGAAATTGCATC
CAACAGCCAATTCAACATTTTGACTGTAGTTGAGAATGAAGTTCAGGTGA
TACTTAACAAGACGTGTTCAAAACAAGCAACATTCGATGTCTTTGTATGG
GATGGTGACTGGAAATCGTTGCATTCTTCTAAAGTGGAATCTCTATTCAC
TGTTGAAGAGACTAACAATCAAGACCAGATGACAATCAGATTCACCAAGC
ATTTATCAGGGATCGTTATCAAGATCACCATCAAATGTCCAGAAGAAGCA
GTCCTCTCATCTGACTGCTTTGTTGTTAAGTTCAATGGGTCGACTACAGA
AATGGTGAATTTTGACCTGATCAACAAGATATTGGAgccttcaacaacaa
caacgacaactTCACCAACTCTTGATACACTGACGTCTACAGATGAATCT
GAGATCATGGTAATCGTTGGTTGTGCAGTTGGTGGCTTGGTGTTGTTGCT
GTTATTCATCCTCTGTCTTATTTGCATTGTCCGcaagaaaaagaaagcta
aagaaaaacaacatcagAAGGCTATATTTATGAGTGATGTCCAAGTATAC
GAAAACCCTTACAAAAGAAGTACCATCGGAAACCCCACGTACGATAAAAA
ATTGCATTCAACAAGGGCCCATCCACACTGTGACGATCCTTACAATCAAA
ATCGAGAATACGCTGAAATCGATCCTTCAATCTACAGTTTACCGCTTAGT
CAAAACCAACCCATAGAACATTCTAAACCCTATGAATTTATTGATGAAAA
TAAGACACGCCCACAAACTAATCACCCTTCCGGAAGACCCGTTTCTGATC
CGGTTTACAGAGAAATAGAGGGAGCGGAATATGATGAAATACGTAACGGA
AAACCCGTTGTTCCGTTTCCAGCACCGGACTATCCACCGGGTGTTGGATT
TTTAAACAACAACACTAGAGAACCTTTGTATAGAATCTTAGAAGAAAAAG
ACTGTGATTTTACAACAGGGCGGAATGATGTGGGGCGTTCGACCTCCATT
AGACATCCACCACCCGATTATTCTCCGCCCCCTCCAACTGGCTGATGCGA
AATTGCATCCAACAGCCAATTCAACATTTTGACTGTAGTTGAGAATGAAG
TTCAGGTGATACTTAACAAGACGTGTTCAAAACAAGCAACATTCGATGTC
TTTGTATGGGATGGTGACTGGAAATCGTTGCATTCTTCTAAAGTGGAATC
TCTATTCACTGTTGAAGAGACTAACAATCAAGACCAGATGACAATCAGAT
TCACCAAGCATTTATCAGGGATCGTTATCAAGATCACCATCAAATGTCCA
GAAGAAGCAGTCCTCTCATCTGACTGCTTTGTTGTTAAGTTCAATGGGTC
GACTACAGAAATGGTGAATTTTGACCTGATCAACAAGATATTGGAgcctt
caacaacaacaacgacaactTCACCAACTCTTGATACACTGACGTCTACA
GATGAATCTGAGATCATGGTAATCGTTGGTTGTGCAGTTGGTGGCTTGGT
GTTGTTGCTGTTATTCATCCTCTGTCTTATTTGCATTGTCCGcaagaaaa
agaaagctaaagaaaaacaacatcagAAGGCTATATTTATGAGTGATGTC
CAAGTATACGAAAACCCTTACAAAAGAAGTACCATCGGAAACCCCACGTA
CGATAAAAAATTGCATTCAACAAGGGCCCATCCACACTGTGACGATCCTT
ACAATCAAAATCGAGAATACGCTGAAATCGATCCTTCAATCTACAGTTTA
CCGCTTAGTCAAAACCAACCCATAGAACATTCTAAACCCTATGAATTTAT
TGATGAAAATAAGACACGCCCACAAACTAATCACCCTTCCGGAAGACCCG
TTTCTGATCCGGTTTACAGAGAAATAGAGGGAGCGGAATATGATGAAATA
CGTAACGGAAAACCCGTTGTTCCGTTTCCAGCACCGGACTATCCACCGGG
TGTTGGATTTTTAAACAACAACACTAGAGAACCTTTGTATAGAATCTTAG
AAGAAAAAGACTGTGATTTTACAACAGGGCGGAATGATGTGGGGCGTTCG
ACCTCCATTAGACATCCACCACCCGATTATTCTCCGCCCCCTCCAACTGG
CTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032182XLOC_032182Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050801-proteinTCONS_00050801-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050801-exon-scaffold_189-1491911889:99923..100115TCONS_00050801-exon-scaffold_189-1491911889:99923..100115Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1510915933:99923..100115TCONS_00050801-exon-scaffold_189-1510915933:99923..100115Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1575043694:99923..100115TCONS_00050801-exon-scaffold_189-1575043694:99923..100115Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1491911889:100471..100591TCONS_00050801-exon-scaffold_189-1491911889:100471..100591Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1510915933:100471..100591TCONS_00050801-exon-scaffold_189-1510915933:100471..100591Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1575043694:100471..100591TCONS_00050801-exon-scaffold_189-1575043694:100471..100591Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1491911889:101072..101175TCONS_00050801-exon-scaffold_189-1491911889:101072..101175Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1510915933:101072..101175TCONS_00050801-exon-scaffold_189-1510915933:101072..101175Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1575043694:101072..101175TCONS_00050801-exon-scaffold_189-1575043694:101072..101175Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1491911889:104798..104913TCONS_00050801-exon-scaffold_189-1491911889:104798..104913Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1510915933:104798..104913TCONS_00050801-exon-scaffold_189-1510915933:104798..104913Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1575043694:104798..104913TCONS_00050801-exon-scaffold_189-1575043694:104798..104913Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1491911889:105338..105374TCONS_00050801-exon-scaffold_189-1491911889:105338..105374Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1510915933:105338..105374TCONS_00050801-exon-scaffold_189-1510915933:105338..105374Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1575043694:105338..105374TCONS_00050801-exon-scaffold_189-1575043694:105338..105374Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1491911889:105648..106378TCONS_00050801-exon-scaffold_189-1491911889:105648..106378Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1510915933:105648..106378TCONS_00050801-exon-scaffold_189-1510915933:105648..106378Clytia hemisphaericaexon
TCONS_00050801-exon-scaffold_189-1575043694:105648..106378TCONS_00050801-exon-scaffold_189-1575043694:105648..106378Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_189supercontigscaffold_189:99923..106378 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.17476 2.31065 1.91109 1.33037 0.481501 0.345899 0.250387 0.273478 0.0820579 0.101642 0.0986561 0.0432351 7.90102 8.56399 0 0.0197796 2.04682 3.49654 18.0805 19.2449 6.11973 5.51075 4.13108 3.38356 8.85186 5.78509 2.31441 1.9475 1.00876 1.54164
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050801 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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