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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050806 ID=TCONS_00050806|Name=TCONS_00050806|organism=Clytia hemisphaerica|type=transcript|length=157bp
ATCACAATCATATTTTTGATTTCATATTTCATGATGTTGAAATTGGTATT
GGTTCTAGCAGTTTTTGTTGCAGCAACTTATATACAAGGAAGAGTACAAG
AAAAACGTATTATCCATGGAACCGAGGCTAAACCAGGTGCATGGCCTTGG
GTCGTCT Run BLAST on NCBI transcript from alignment at scaffold_189:235663..236532+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050806 ID=TCONS_00050806|Name=TCONS_00050806|organism=Clytia hemisphaerica|type=transcript|length=870bp|location=Sequence derived from alignment at scaffold_189:235663..236532+ (Clytia hemisphaerica)
ATCACAATCATATTTTTGATTTCATATTTCATGATGTTGAAATTGGTATT
GGTTCTAGCAGTTTTTGTTGCAGCAACTTGTAAGTATCTTAGTACCTTCG
AAACTTTTAACTTGTACGTATTTTTATACCTAGCTTCGAATTTCAAAATA
ACTAGGCTTTTTGTTTTTACTTTTTACCCTTTAACTGCTATGCGTTTGAC
CATTTTGCCGCGAAATAAAATGAAGGTTCGACCTATTTATTAAATTTCGG
CATATGCCGACATGAGCGAACACAGATCAACATCGCATTTAATTATGAAA
AACATCTTTTAAATATAATTTATTTACTCAATTTTCTCAAAATTGAAGTT
TCAATAAATTTTAAAATAAATTTCAAAATTTTGAAAATTGATCAAAATCT
TAGAACAACTTAAGAACAATCTGAGCCTCAGATTTCTAAATTACTAGAAA
AGTACTGATTTTAACAGATTTAAAGTTGAAACTCATTTTTAAGAACAAAG
TAAGAACATTTATAAGACCGGAAAATTCAAAATAATTAAGAACCAGCTCA
GCCTGACCCAAAGTTTACTGGTTCTTATAAAAAAGCGCGAATTTTTGGAC
GCTTTCGTTCTGAAATGTTACAATTATTAAAGTCATTAAACGTCAATTTA
TAAGCAATCCTTTAATATATAATTGAACACGTTAAAGCTATTTTTCGGTA
TAGGTTATACCTTTCACGAAAATTCATTTCTTATTTTGAAGCTTATGAGT
TGGGAAAACATAAGATCATTATATTTTGGCTTAATTCTTTAGATATACAA
GGAAGAGTACAAGAAAAACGTATTATCCATGGAACCGAGGCTAAACCAGG
TGCATGGCCTTGGGTCGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050806-exon-scaffold_189-1491911889:235663..235741 | TCONS_00050806-exon-scaffold_189-1491911889:235663..235741 | Clytia hemisphaerica | exon |
| TCONS_00050806-exon-scaffold_189-1510915933:235663..235741 | TCONS_00050806-exon-scaffold_189-1510915933:235663..235741 | Clytia hemisphaerica | exon |
| TCONS_00050806-exon-scaffold_189-1575043694:235663..235741 | TCONS_00050806-exon-scaffold_189-1575043694:235663..235741 | Clytia hemisphaerica | exon |
| TCONS_00050806-exon-scaffold_189-1491911889:236455..236532 | TCONS_00050806-exon-scaffold_189-1491911889:236455..236532 | Clytia hemisphaerica | exon |
| TCONS_00050806-exon-scaffold_189-1510915933:236455..236532 | TCONS_00050806-exon-scaffold_189-1510915933:236455..236532 | Clytia hemisphaerica | exon |
| TCONS_00050806-exon-scaffold_189-1575043694:236455..236532 | TCONS_00050806-exon-scaffold_189-1575043694:236455..236532 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_189 | supercontig | scaffold_189:235663..236532 + |
Blast
The following BLAST results are available for this feature:
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