TCONS_00050814 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050814
Unique NameTCONS_00050814
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050814 ID=TCONS_00050814|Name=TCONS_00050814|organism=Clytia hemisphaerica|type=transcript|length=185bp
CCTGTAATCATTGATACATTGACTGTCTCCAAATATTTCTCCAGTTACTT
GTGTAGGGTTGTTCAATTTGCAACTCACACCTCGTTGGAATGATTCATCA
CCTTCGAAGTAGTCACCAATTTCTTGACGTTCAATAAAATCACCAGCACC
AATGCCAAATAAGGTCATACAAACACCAAGCGTTA
Run BLAST on NCBI

transcript from alignment at scaffold_189:95780..96094-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050814 ID=TCONS_00050814|Name=TCONS_00050814|organism=Clytia hemisphaerica|type=transcript|length=315bp|location=Sequence derived from alignment at scaffold_189:95780..96094- (Clytia hemisphaerica)
CCTGTAATCATTGATACATTGACTGTCTCCAAATATTTCTCCAGTTACTT
GTGTAGGGTTGTTCAATTTGCAACTCACACCTCGTTGGAATGATTCATCA
CCTTCGAAGTAGTCACCAATTTCTTGACGTTCAATAAAATCACCAGCACC
AATGCCAAATAAGGTCAAACAAACACCAAGCGTTAGGAACTCATACTGGA
TCATAATGTTACCTGAAACTGGAAAAAACATTGTTTTGAGACAGGGACAA
GGACAATGACTCGAGTTATAACCAAGGGGGTGATGCCTTCAAGGTCATAC
AAACACCAAGCGTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032192XLOC_032192Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050814-exon-scaffold_189-1575043694:95932..96094TCONS_00050814-exon-scaffold_189-1575043694:95932..96094Clytia hemisphaericaexon
TCONS_00050814-exon-scaffold_189-1575043694:95780..95801TCONS_00050814-exon-scaffold_189-1575043694:95780..95801Clytia hemisphaericaexon
TCONS_00050814-exon-scaffold_189-1510915933:95932..96094TCONS_00050814-exon-scaffold_189-1510915933:95932..96094Clytia hemisphaericaexon
TCONS_00050814-exon-scaffold_189-1510915933:95780..95801TCONS_00050814-exon-scaffold_189-1510915933:95780..95801Clytia hemisphaericaexon
TCONS_00050814-exon-scaffold_189-1491911889:95932..96094TCONS_00050814-exon-scaffold_189-1491911889:95932..96094Clytia hemisphaericaexon
TCONS_00050814-exon-scaffold_189-1491911889:95780..95801TCONS_00050814-exon-scaffold_189-1491911889:95780..95801Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_189supercontigscaffold_189:95780..96094 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050814 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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