TCONS_00050850 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050850
Unique NameTCONS_00050850
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050850 ID=TCONS_00050850|Name=TCONS_00050850|organism=Clytia hemisphaerica|type=transcript|length=120bp
TTTCAATACACGTCAGATCTGAATCTGACGGTatttcaaaaaacattaaa
cGTATTATAGAGTAGTATGGTTGTAACATGATATATAATATACtattata
aaaaacatattaCATCAGAC
Run BLAST on NCBI

transcript from alignment at scaffold_189:189472..189591

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050850 ID=TCONS_00050850|Name=TCONS_00050850|organism=Clytia hemisphaerica|type=transcript|length=120bp|location=Sequence derived from alignment at scaffold_189:189472..189591 (Clytia hemisphaerica)
GTCTGATGtaatatgttttttataataGTATATTATATATCATGTTACAA CCATACTACTCTATAATACgtttaatgttttttgaaatACCGTCAGATTC AGATCTGACGTGTATTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032220XLOC_032220Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050850-exon-scaffold_189-1491911889:189472..189591TCONS_00050850-exon-scaffold_189-1491911889:189472..189591Clytia hemisphaericaexon
TCONS_00050850-exon-scaffold_189-1510915933:189472..189591TCONS_00050850-exon-scaffold_189-1510915933:189472..189591Clytia hemisphaericaexon
TCONS_00050850-exon-scaffold_189-1575043694:189472..189591TCONS_00050850-exon-scaffold_189-1575043694:189472..189591Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_189supercontigscaffold_189:189472..189591 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top