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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050869 ID=TCONS_00050869|Name=TCONS_00050869|organism=Clytia hemisphaerica|type=transcript|length=1281bp
AGTCAAATAAAAATTACGGGTAGTTGGCTAAGCGGAGCTGGTTTGTTTTG
TTCTGCGAAATACAACGATTTCGTGTTTTGTTTTCACGAATGCAATCTTT
TATGTCGGCCTTTTCCCGTTGGGTTGTCAGTTAAAAAAGTATGTGAACTG
CATCCATATTTTTCTTGACCATATCTAATTCATTCTACTGTATTGATACT
GGAGATGATTGTTGAAGGACTATTCTTTGATTTTTGTGCCTTATTTTTTG
ACTGAAAGTTTTCATGGTCAATTTGTACCTGTCTATCGTCGGGGCACTCT
AATTGTGTTAATTGCTAAATCTTCCTTGGCTTTTCCTTTCAGATGGCAAA
ACCACACGCATCCCGAAACTCGACCCTTCCCGGTGGTGTCAGCCGTCTTG
GCAGAGCTACAGTTTACAAAAAGAAAGCTCTCTACAAGCGGAAAAAGGTT
GCAACTAAACCAGCCGCCAAAGATGCAGCTACCACTAAAGTGAAGCAAGT
TGGAGGTGACAAAAATGGTAAAACACGTACTGTTCCATTACAAAAGGAAT
CTAGATTCTACCCAACAGAAGACATCAAAAGACCCTTGAGAAACAGGAAA
ACACAACGTCCATCCAAACTGCGACAAAGTTTGACCCCAGGAACTGTCTG
CATTTTGCTTGCTGGCAGACATCGTGGAAAACGTGTTGTATTACTCAAAC
AATTGGACAACTCTGGTCTCCTGTTGGTTACTGGTCCATACAAAGTTAAC
GGTGTTCCACTCAGACGTGTTCCAGCATCTTACGTCATTGCAACTCGAAC
TAAAGTTGATGTATCCGGAGTTAAATTGTCTGATAAAATTAATGACACTT
TGTTCAAACGCTCCAAGAAAGCCAAAAGATCATCAGACGCTATGTTCGAA
GAATCAGCAGCTggATACAAAGTATCAGACGAACGTAAATCGGAACAAGA
ATCCGTCGATACTGCAGTTCTCGCTGCCATTGGCAAAGAACCACAATTGA
AAAGATACATGTCACAACTTTTCACACTCAGGAAAGGCCAGTTTCCTCAT
GAAATGATCTTCTAAGAAGataattttctgtaaaaaaaactttccgAGAC
TTTTTTCTTCATCCCGACAGTTAACACTTTTTAAAAGACGTCGACCGTAT
AAAAAGTGAGATCTGACCTCTttaaatagacgatatcggctttagataaa
tgcaatgcattctggtttctagggactctcaaaggaattataatctatta
taattgatctattataattcctttgagagtc Run BLAST on NCBI transcript from alignment at scaffold_19:46063..56595+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050869 ID=TCONS_00050869|Name=TCONS_00050869|organism=Clytia hemisphaerica|type=transcript|length=10533bp|location=Sequence derived from alignment at scaffold_19:46063..56595+ (Clytia hemisphaerica)
AGTCAAATAAAAATTACGGGTAGTTGGCTAAGCGGAGCTGGTTTGTTTTG
TTCTGCGAAATACAACGATTTCGTGTTTTGTTTTCACGAATGCAATCTTT
TATGTCGGCCTTTTCCCGTTGGGTTGTCAGTTAAAAAAGTATGTGAACTG
CATCCATATTTTTCTTGACCATATCTAATTCATTCTACTGTATTGATACT
GGAGATGATTGTTGAAGGACTATTCTTTGATTTTTGTGCCTTATTTTTTG
ACTGAAAGTTTTCATGGTCAATTTGTACCTGTCTATCGTCGGGGCACTCT
AATTGTGTTAATTGCTAAATCTTCCTTGGCTTTTCCTTTCAGATGGCAAA
ACCACACGCATCCCGAAACTCGACCCTTCCCGGTGGTGTCAGCCGTCTTG
GCAGAGCTACAGTTTACAAAAAGAAAGCTCTCTACAAGCGGAAAAAGGTT
GCAACTAAACCAGCCGCCAAAGATGCAGCTACCACTAAAGTGAAGCAAGT
TGGAGGTGACAAAAATGGTAAAACACGTACTGTTCCATTACAAAAGGAAT
CTAGATTCTACCCAACAGAAGACATCAAAAGACCCTTGAGAAACAGGAAA
ACACAACGTCCATCCAAACTGCGACAAAGTTTGACCCCAGGAACTGTCTG
CATTTTGCTTGCTGGCAGACATCGTGGAAAAGTATGTTTAATTTCTGGCT
GCCTTTTACATTTCTAAACAAGTGCAGATCAATGAGAAATCGTTTTGTTA
CACGTGTAACACAAAATCTTGGTTCTTACATAGTTTATATGGATATGGGA
TGGAAATAAATTGGAATCTTTGTCTGTTGTCATAACATAGTTGGTTgtag
aaaaattgacaatttacaATTTATGAACttaaggcggtcatcgaaaaatt
gttctatttgtgtcacccgcccgcatcaaatgTTCCGCTAATTTTCCGGT
GTgcagatgcggaaaaaaatctgcctgcgaaaagcaatttgttcttttaa
agtatagcttttttctcaattgctctgacgaccatcaaaaaattgttttg
ctcgcgttaccacccgcccctgacagtcaggaacagtcgccttattagga
gacgcctcctaatcaggagacgggtgtaattatctcgtgaacgagcaaac
tgcgcatgatttgattgctcccaatggaaagagcacaaaaaattgattcc
atatggtgattttcagaaaaatccaccggtggaatcaatcacaattctaa
taatccataagaaccaatcagaagtatctgtcttctgaacaaaagcgtct
caaaaagaaaaatggcgaacatgaaaaaaatcaagaggggcttccttgta
gtgctttatattaggattgtgattgattgcaccgagaaattttgatactt
tttttaaaacttaaccaattcgaggctgctctttccattaaaactagttt
caaaatgcgcagaaaagcctaaagcccttaaaattgagatcaaagtttta
tgtctcctaattaggagacgggtctcctaatcaagcgaccccaagcgacc
tacatgtctcctaatcagcctaataaggcgactgttcctgactgcCTGAG
TTACTggcatgattaaaaaaaaccgggaatgtttttgacagcccgtccgc
ccgcatgcatttttaacacccgttgcgacgtaaacagattttttttttcg
atgaccgcctaagcTTGTCAGAAATGGCTCTGGAAAAAAATTAGATCCAC
TATTGATTTTAGGTGAATATGTTTGtttccagacggtactaatcatTCAA
TTTCGATTATCGAAGTAATTGAACTACCACTTCGATTGATtaacaattga
attttcagtaccaaaattttaaaaaacttgTGAGCATCTGATCACTTtct
taggcggtcatcgaaaaattgttctattcgcgtcacccgcccgcatcaaa
ttttccgctgattttcccgtgcggagatgcggaaaaaaatctgggaaaag
caatttgttcttttaaagtatagcttttttctcaattgctcctgacgacc
atcgaaaaattgttttgctcgcgttactccccgcccctgagttactggcg
tgatttaaaaaaacccgggaatgtttttgaccgcccgtccgcccgcatgc
atttttaacacccgttgcgacgcgaacagagcattttttcgatgaccgcc
ttagGGGAGCCGttcatattcatttgacaacagAAAATGTCAAATTGACG
TTAATAGGGGGTGGGGGGTTTTCAGAAGTTAGGTTTGACattataagaaa
tcaaaggtactgtataccgtcaactgctctaacttgggactatctgacaa
aacatgggacggcaattcggccaccatttcaacgaacctccaaagtcatt
tgatttgagttttaaggaacggcatatttaaaaatacacaatttctttcc
attttacagtaagtgaaataCAGACCAGATTAGATATGCAaaagtcccat
gttttgaccaatcgtcccaagttagaacagttgacggtacctttttgtga
aaatcttgaATATTTGTTACCACCAATCCACACTATACTTTTTaatctgt
caaaaatatatTGGTGGTGGTACGCATAGAGCACAGCACAGACGTAGCGC
CAAGTGGAGCTTTTTATTTCTTAttaaataaaggtcattagttaAAGGAA
CACATACACGCACGGGTACAACCAAGTACAAACTTTGCGAGGGGAAAACT
TTGATGAGAAAATGGCAACATTTTTTGGTATACATCGCTTGACGTTATCT
GTGGGGGTGGGGGTTCAGAGGATAatgtcaatttgacgttatgcattgtc
aaatgaatatggaccgATCCCCTTAAACAAGGGGACTTGATAACTGTTTG
AGtgctttgattgttattgattacttcgataaccaattaaATTACCTCCA
CACTAATATCGTGCATTCTGATTGGTctgagaaaacaaaaaagtgatTGC
GTATGAATCGCATGTTTTTTAATTCACGAGACAAACTTAGTTTCAGATTA
TTCTGATGCGTCGTTTTAGGAAACACATTTGATAAAATTGAGggtattca
atatgattgaAGGTAATCGAAAAGTAATCGTAATGGCCAAAGAAATCAGA
AGCAGTTGAAGAGAGTGCCATTATCTGGAATCAAGCGAGCATATGATCGA
CAATAAAATAGGTGGTCACTGACCGCCATCATCCGTCATTGTTGATTACT
TTGATCACAATTGATTAGTACTGTCTGGTTGTTTAAACTATAAACAAagt
ggattttttttctttaccaTTTCTGAGAAGTCTGAATTTACATGAAAGGT
Ggcatataatttttgattttctgcgttttcaggcaaaataccacgtgata
gaactcttcaaagtgagcaaaaaaatgtattacaacaaaGTCGCAACTTT
TCTTGATCAATAGTTATGGTcttttttgttgtcaaaaagtgttataattt
tgcataaattaattttgcataaattatacATATTGTGGGGAAATTCTGTT
TTCGATCGTTTTTTGACcacaaaaacgcccataactttAAAGAGCTCTAG
CACGTGGTATagatcttttttgattttgaggaccccaaaaatcatgaatt
actcaaaaactgcgggtttaagcttggtaacatttaaatttggaatcagc
accctcaactTGACTAGGAAACatagggcttttccagaaaaaatccgttc
atggggggtggaggatatattattttttcatgaattactcctggatattt
cgatttttaaccccatggacacgggttatacccctggacaaacatcaaat
taaccccgtggacacaaaaaattacccctggacattggaatttaccccct
ggacattgcaattttttggtattttttcaatacccctggaaaattcatcc
tccaccccccatgaacggattttttctggaagagcccatatcaaaaagtt
ggtcacggacattttaaattttttcttaattttttaaacttgagCAATTC
ACTGGCCACAGCCTCATACTTCTCATATTAAGGGGCCACTCACATATCAA
TGTTTCCCGcaactaacgtcaaattgacgcaaGAGGGTGGGATGGTCAGA
GGCAGTAGCGTTACGAAAATCAAGTCATTCATTGATTTTCAGGGCGGATT
GAATTCTGATTTTTCAGTCAgatatttttcactttgttaACTACTAAATT
GCTATGCATAGTTTAATCATCTACTTTTCATGGCTTTTACACTAAAAAAT
TGGTGTCAAGGCAAGACAAGCCAATTGAGTTAAAAGTTAAAGCTAAGATT
AAAATTacaatttcattgatttttggtGGCTGACGCTGGGGTAGGGGGTG
GGAGATATGGGAGTTATGGGAGAAATAGATATGTGAGTGGCCCTTATAAA
AGATCAACTAAAACCATCAAAAATCAGACTTGTCATGAAAAACCACGATT
GGACGTTTGGGAGGTGGGAAAGAAATTTCGCCCAGAAATATTAATTTTGG
AGAAGTTCATTCCATGCCAAATGTTACTCTGCCATGTTTCTTTTTAACTG
CCTTAAATTTTTGCATACAGCTGGCGTTTTCAGCTGCTGCTATTAATTAC
AAATATTAATATAAACTGTAGGTTGTAACAAAAAAGCAAGACGGCCGCTA
AAACAGCAATGGAATATTTACAGTGATTAAGGGTTAAAGATAGGTTTAAT
TGCCATGACAACAATTTAAAAGCAAGGGGGTGAGAGTTTGTAATAAAATG
GCCATTCAATTTATTTGTGGTAAGTAAGTCTGAGTTGGATGGCTCCCTAA
AAGGAATGTGCAAAATCACAAACAGCTTCAGAAGGGTTAGCTTTTATAAA
GTTAAAAAAGTAAACATTGAAAGAAATCTGACAAATTGAAGAATTATCAC
TTTGATGTTTGAAACCCTCAAGGAAGTATGAATGTCATTTTTctaatgga
aaaaaaaataaaccaagctctttgttttcaataatgTTTATTTCCTCTTT
TAGCGTGTTGTATTACTCAAACAATTGGACAACTCTGGTCTCCTGTTGGT
TACTGGTGAGCTTAATTATTATAGTGTATTTTTCCTCGCACTTCCTAAGA
TCAAATCCTCAAATTTCTTTACTATTTAATAAGTAGGGGTAGGGGGTAGa
gtaacttttttggggggtatcttcagatcttcttcgcctggtgttttttc
tgttccatataatgatagaagacatttaaaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNaaaaaaaaattttttaaatgtcttctatcattatatggaac
agaaaaaacaccaggcgaagaagatctgaagataccgaCTTTTACCCCCT
ACCCCTAATTTAAGCAGTATTGAATGTGTCcttgatttgaaaattcaaag
aaagTGAACCCTTTCAGGTAAAATCTAAAATAACATGGATATCGTTGGTT
CGTTTTAGGTCCATACAAAGTTAACGGTGTTCCACTCAGACGTGTTCCAG
CATCTTACGTCATTGCAACTCGAACTAAAGTTGATGTATCCGGAGTTAAA
TTGTCTGATAAAATTAATGACACTTTGTTCAAACGCTCCAAGAAAGCCAA
AAGATCATCAGACGCTATGTTCGAAGAATCAGCAGCTGTAAGAtatttat
ttgttgttttttaattctttttaattttcactgTGCTCTTTAAAGAAGAG
TGTCTTGAGATGATGGACCTTCAGGCGATGAAGACTATCTACATAAGgaa
aaattttacaagaactaattttggtgaatttggcTAAATAAGTTCTTGcc
taaaattcatcaaaatagggcaaaatagggggacaagctggagtttttac
aagtttgatttggttggtcattaacctgtaataaaacaattttgttactt
tttctaaagaacgcgtcatctctattacttcaaataaccaattagtgaag
tctcttgtaCAAAAGTTACCTTaggagcggtcattaagtatagCATATAC
CGGGGTGGAGGggatttttcgtttttgttttcgtACCCTatcaaaaattc
tcaaaaaaatttcaaaccctaCCAAAAAGTGGGATGAAATTTTCATACCC
TACCAGCCGCATAGACATGAAACAACACTTTCATCTAAATGCGATGTTTG
GGCTTCAACAAAGCTAGCGTATAAAGGCAATGTGGGGGCAATGTATATTT
CACACCCCAACTTAAACTATACACACACCTTAAAGGATCATTTTTGCAAG
AGAGCTGTTCTTTAAATACCTGGTAACTTATGCTACAAGtagaattgatg
gttttgaagaaacTAATTATAGAATCAAGTAACTACTTGTAAACTAGTTG
GTTTTGAAGATTCTATTTGTAAGATAGAtggttttgaggattttacgtTT
AACAAATTGATTGTTTGGAAGATCCTACTTCTAGAATTGATGATTTGAAG
ATCCTGCATTTAATTAAACACGATGGGTTTGAAGATCCTATTTGtagaat
tgatggttttgaaaaTCCTATTTTTAAAATCGATGGGTTTGAAGAtgata
ttttaaaaattgatggttttgaagatcCTAAGTTGTAGAAGTGATGGTCT
TGaaaattcttgttgtagaagtggtcttgaaaattcttgttgtagaagtg
ATGGTCTTAcaaattcttgttgtagaagtgatggtcttgaaaattcttgt
tgtagaagtgATGGTCTTGAAAATTCTTGTTGTGGAAgtgatgattttga
aaattcttgttgtagaagtgATGGTCTTGAAAATTCTTGTTGTGGAAGTG
ATGGTCTTGaaaattcttgttgtagaagtggtcttgaaaattcttgttgt
agaagtgATGGTCGtgaagattcttgttgtagaaatGATGGTTTTGAAGA
TTCTTGTTGTGGAAGTGatggttttgaaaattattgttgTGGAAGTGATG
GTTTTGAAGatggttttgaaaattattgttgTGGAAGTGATGGTCTTAAA
AATTCTTGTTGTGGAAGTGATGGTCTTGAAAATTATTGTTGTAGAAGTGA
TGGTCTTGAAAATTATTGTTGCCGTTGTTCTGTTGTATGATTGATAGTTT
TAAAGATCCTATTTGTAAAGTTGATGGTTTTGCAGATCCTACTTGGAATA
ATGGTTTTTAGCATTCTACTTGGGAAGttgatggttttgaataatCTGTT
TGtaaaattaatctttttaaagatcCTTCTTGCAGAATTGATGGCTTTGA
AGATCCTACTTGTACAACTGATGGATTTGAAAATCCTATATTGTAAAATT
TAAGGTTTTGAAGATCCTACTTTAAAATTGATGGGTTTTAAGATCCTATT
TGTAAAATTGATGGTCTTGAAGATCTCACTTGTAGAATTAATTGTTTTGA
AGATCCTGcttgtaaaattgatggttttgaataTCCTACTTGCAAAATTT
ATGGTTTTTATTTCacttaattttttattattttccaatttattGAACGT
TGGTCTTACATAGTAGGTATAGTAATAATTAAATATTAATTCATACCAAC
TATAGAGAAATTGATTTCATGTAAGATTCTGCTTGAGAAGTTGATGGTTT
TGAGGCTACTTTACCAGTAAAATTGATGGTCTTGAAAATCCTGCatgtaa
aattgatggttttgcaGAGCCTAGTCATAGAATTTATGGTTTTGAGGAGC
CAATATATAAAATGTTAAAACACTAAAATTTGGTTTATCGGCCCCACCTC
CAAAATTGACTTCTAAAAGGAAGGTGATTTTCGGAAATCTTTTTATGTAG
TATTGATATATGCATAAAAGTTAGTCATTCTGTAAAATTTTAGACTGAAA
GGTCCATTGGTGCCTATTTTATGAaactttgaagtttttgaaattttgtg
gtTTACAAGGATATTGGCGCTTTAAGGCtgataaaatcaaagtttttaca
aaaataaagcacagctcaaaagattttcataccctACCTAAAATGAGGGG
AAAAGTTTCATGACCTACCCAAATCCCTTCCGCCCCGGTATATGttatac
ttaatgaccgctcccttatgtgacaaggatcttgtgtcccaaatttcatc
caaaaagacccactagatcaaaagttaagggtggtacaggaaaagccccc
ctcCCCCCTAGGTTCCGAAccacccctaaaagcctaggtttaAAAGGGTT
AAAGGACAACAGAAATTTAAGTAAAGCCTCAGCTTAAGAAAATAtgtagt
caattttttttttcgcttcAAAACCtcttaaagtctgtctcaatataatt
tgcagtggagacaaaaaaggctgtaacttttgatagaatttgaagtAGAA
AGCAGTTCtgtgcttgttaaaaagataatttgcAGTGGAATATATTATCg
aaatagaaaaaattcaaaaaatggaaaaacgaagatgaaaaatgaagaag
aagaaaatcaacttcttgttaaataatgctatgatcttcattttaatatc
agaaattctttaatcttagaACGTCGCGaatgcgaaaaaaaattcaaaaa
atatttatcaagTCAAATTAtacagtttaaaaaaaaacttcgcCCTGGTC
GACTTTTAAAAGGgctatttttgatgttttttgattgtttttgaagtcaa
tcagtTTTAAACTTTTGACTATATTTTTCGATGGaatgaatttctttgaa
ttttttttttcacataacagggtgtctacgggaccttaAAAACATTTCAA
GTGAACCACCCAAcattgaaacccttgaaaactGTCACATTTCTGGAAAT
AACCTGGAAAACCtcgaaaaatcgttaaaaaccttgaagaagttaatttt
caatcttcattttccgacctttttaagttttttctttatgataatattcc
actcctgtttaGCTTTTTAACAAGTACAGaaccgctatctaattcgaatt
ctatcaaaagttatagccttttttgtctctgcTGCAAATTACATTGAGAC
AAGACTTTCGAACAATCATTTCTGGTTGCAAGGTAGTTAGTTGAAATCTA
GCTATTCTATTGCTGCATCAAGATAAAACCTTTGGTATTATCCAGTTCTT
CTGTCTTAAAACTTAAACACATTGCACAGTTTGTTTTTGTGTATATttag
gtctgttagcacaaaaatactgaaGAAAAAGGCTGAAATGTGGCACATAC
GACCCAAAAAATGACTCCAAAATTAtgagttttttctgttttgccTGGCT
GTGGTAAAACactttttctggaaattttcttaatttgttcatttctttgt
tgttgtttttttagggATACAAAGTATCAGACGAACGTAAATCGGAACAA
GAATCCGTCGATACTGCAGTTCTCGCTGCCATTGGCAAAGAACCACAATT
GAAAAGATACATGTCACAACTTTTCACACTCAGGAAAGGCCAGTTTCCTC
ATGAAATGATCTTCTAAGAAGataattttctgtaaaaaaaactttccgAG
ACTTTTTTCTTCATCCCGACAGTTAACACTTTTTAAAAGACGTCGACCGT
ATAAAAAGTGAGATCTGACCTCTttaaatagacgatatcggctttagata
aatgcaatgcattctggtttctagggactctcaaaggaattataatctat
tataattgatctattataattcctttgagagtc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050869-exon-scaffold_19-1491911889:46063..46743 | TCONS_00050869-exon-scaffold_19-1491911889:46063..46743 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1510915933:46063..46743 | TCONS_00050869-exon-scaffold_19-1510915933:46063..46743 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1575043694:46063..46743 | TCONS_00050869-exon-scaffold_19-1575043694:46063..46743 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1491911889:51116..51167 | TCONS_00050869-exon-scaffold_19-1491911889:51116..51167 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1510915933:51116..51167 | TCONS_00050869-exon-scaffold_19-1510915933:51116..51167 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1575043694:51116..51167 | TCONS_00050869-exon-scaffold_19-1575043694:51116..51167 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1491911889:52371..52549 | TCONS_00050869-exon-scaffold_19-1491911889:52371..52549 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1510915933:52371..52549 | TCONS_00050869-exon-scaffold_19-1510915933:52371..52549 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1575043694:52371..52549 | TCONS_00050869-exon-scaffold_19-1575043694:52371..52549 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1491911889:56227..56595 | TCONS_00050869-exon-scaffold_19-1491911889:56227..56595 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1510915933:56227..56595 | TCONS_00050869-exon-scaffold_19-1510915933:56227..56595 | Clytia hemisphaerica | exon |
| TCONS_00050869-exon-scaffold_19-1575043694:56227..56595 | TCONS_00050869-exon-scaffold_19-1575043694:56227..56595 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:46063..56595 + |
Blast
BLAST of TCONS_00050869 vs. Swiss-Prot (Human)
Match: RL6 (60S ribosomal protein L6 OS=Homo sapiens GN=RPL6 PE=1 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 8.406e-48 Identity = 92/193 (47.67%), Postives = 126/193 (65.28%), Query Frame = 1
Query: 502 GGDKNGKTRTVPLQKESRFYPTEDIKRPLRNRK----TQRPSKLRQSLTPGTVCILLAGRHRGKRVVLLKQLDNSGLLLVTGPYKVNGVPLRRVPASYVIATRTKVDVSGVKLSDKINDTLFXXXXXXX--XXXDAMFEESAAGYKVSDERKSEQESVDTAVLAAIGKEPQLKRYMSQLFTLRKGQFPHEMIF 1062
GGDKNG TR V L+K R+YPTED+ R L + +Q KLR S+TPGT+ I+L GRHRGKRVV LKQL SGLLLVTGP +N VPLRR +VIAT TK+D+S VK+ + D FK+ K K +F+ Y+++++RK +Q++VD+ +L I PQL+ Y+ +F L G +PH+++F
Sbjct: 97 GGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQL-ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYLRSVFALTNGIYPHKLVF 288
The following BLAST results are available for this feature:
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