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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050933 ID=TCONS_00050933|Name=TCONS_00050933|organism=Clytia hemisphaerica|type=transcript|length=829bp
taTGTTCTCAAACGATGGGAGAGTAGTCGTCACGCCGCAGGACTCATTTG
AAGAAAATGCACCAAGCTCAAACGACATTATGCACGCCTTGGCAGCTTtg
cagaaaaaagaaaacactctAAATCACCATAGGAACCAACATAACAACAA
CGATGTCGAAAAAACTAGAATTGGAATGCCTGCATGGAAATCAAAGAAAG
ACGGGGGCTCTACCACGAAAAAAGAATCATGCATCAATAAAGTCCCCTAT
GATCAATGCAGCCTCGAATTCATCAAACGCGGTACATGCAGCCCTGAAAG
TGGATTTGATTTCTTCGAAAACTGCCAACAATATTGTGAATTCTGTGTCC
CTGACCTCTtcggtgatgacgtcatcaaaacaaagaataaTGATGCTGAA
AACAAAAGAGTTACAATTAAAGATAGTAGCCGAGCTGTGTCAAAGACTGG
CGGAAGTGAACCATACCCTTGGGACAACTGGAAGAAGGAAGACTTGGAAA
GAATTGCCAAGGACGGTGAGCAATGCGTGAACAAGGCACCCTATAACACG
TGCAGCCTCCAATTTATCAAACGTGGGTCTTGCCAGTCTGATGAAGATTT
TGATTTCGTGAGAAATTGTCAACAATATTGTGAATTCTGTGTCCCTGATT
TGTCTGGTTAAAAACTGCAGAACTAAAAATTAACCGATTAACTGGTTTTT
GTAAGGCTTATAGAGTATTAAAAAGTTATCAGTAAAATTTTTAACACAGC
CGTATTTTAAACATTCTTGTTGTTATTATTCTAATCGTTATAACAATTTT
GGCCATAGGAAGTTTTGCTTAAAGTGGTT Run BLAST on NCBI transcript from alignment at scaffold_19:740985..742209- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050933 ID=TCONS_00050933|Name=TCONS_00050933|organism=Clytia hemisphaerica|type=transcript|length=1225bp|location=Sequence derived from alignment at scaffold_19:740985..742209- (Clytia hemisphaerica)
TATGTTCTCAAACGATGGGAGAGTAGGTATGTTATGGTTGCATCAATTTT
TGTCTTTATGTCTGAACTAGAAGAATTGTGCACACTTGAAGTATTGTAGC
TTAATTATTAAGTATTGCAAGGAAAAAACTTGACTTCAGAGCTTAGTCTT
CTTTTCCAAGACACCAATATTGTGTCGATTCGAAATTTTAGGTGTACATT
TTTCGAACTAAAACACCTTAAAATGCTACCTTTTCTTCTACAAAATTTCA
CTATCAGAGGTTTCCTGATTTCTTGGGATTAATTTGGTTGATAATTAAAA
TTTCCAGATGGAATGCAGGTTTAATTGGAAAAACTCACCAATGCCTTTCC
TTACATTGTTTAAAATAGAAAAGCCAAATGAATGTAAATAAAATAACTCT
TTCTCATTTTTCCCCACAGAAGTCGTCACGCCGCAGGACTCATTTGAAGA
AAATGCACCAAGCTCAAACGACATTATGCACGCCTTGGCAGCTTTGCAGA
AAAAAGAAAACACTCTAAATCACCATAGGAACCAACATAACAACAACGAT
GTCGAAAAAACTAGAATTGGAATGCCTGCATGGAAATCAAAGAAAGACGG
GGGCTCTACCACGAAAAAAGAATCATGCATCAATAAAGTCCCCTATGATC
AATGCAGCCTCGAATTCATCAAACGCGGTACATGCAGCCCTGAAAGTGGA
TTTGATTTCTTCGAAAACTGCCAACAATATTGTGAATTCTGTGTCCCTGA
CCTCTTCGGTGATGACGTCATCAAAACAAAGAATAATGATGCTGAAAACA
AAAGAGTTACAATTAAAGATAGTAGCCGAGCTGTGTCAAAGACTGGCGGA
AGTGAACCATACCCTTGGGACAACTGGAAGAAGGAAGACTTGGAAAGAAT
TGCCAAGGACGGTGAGCAATGCGTGAACAAGGCACCCTATAACACGTGCA
GCCTCCAATTTATCAAACGTGGGTCTTGCCAGTCTGATGAAGATTTTGAT
TTCGTGAGAAATTGTCAACAATATTGTGAATTCTGTGTCCCTGATTTGTC
TGGTTAAAAACTGCAGAACTAAAAATTAACCGATTAACTGGTTTTTGTAA
GGCTTATAGAGTATTAAAAAGTTATCAGTAAAATTTTTAACACAGCCGTA
TTTTAAACATTCTTGTTGTTATTATTCTAATCGTTATAACAATTTTGGCC
ATAGGAAGTTTTGCTTAAAGTGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050933-exon-scaffold_19-1575043694:742184..742209 | TCONS_00050933-exon-scaffold_19-1575043694:742184..742209 | Clytia hemisphaerica | exon |
| TCONS_00050933-exon-scaffold_19-1575043694:740985..741787 | TCONS_00050933-exon-scaffold_19-1575043694:740985..741787 | Clytia hemisphaerica | exon |
| TCONS_00050933-exon-scaffold_19-1510915933:742184..742209 | TCONS_00050933-exon-scaffold_19-1510915933:742184..742209 | Clytia hemisphaerica | exon |
| TCONS_00050933-exon-scaffold_19-1510915933:740985..741787 | TCONS_00050933-exon-scaffold_19-1510915933:740985..741787 | Clytia hemisphaerica | exon |
| TCONS_00050933-exon-scaffold_19-1491911889:742184..742209 | TCONS_00050933-exon-scaffold_19-1491911889:742184..742209 | Clytia hemisphaerica | exon |
| TCONS_00050933-exon-scaffold_19-1491911889:740985..741787 | TCONS_00050933-exon-scaffold_19-1491911889:740985..741787 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:740985..742209 - |
Blast
The following BLAST results are available for this feature:
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