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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051046 ID=TCONS_00051046|Name=TCONS_00051046|organism=Clytia hemisphaerica|type=transcript|length=829bp
caaattaaaacCGACCgagaccgacccacctccaaaatctagggtcgggt
gacggcaaaccaacaattttttaagcccagccttAGATAAATTTTTTTAC
TTATATAGGTTCATAAGGGAATAACTGACAGTTTTTAGATGGGTGTAGCT
CAAGAAAGAGAATCCAATAAAACACGCGTACCCTGCTTCCCTCACTCAGG
AAAGAacaatataaaatgaaaaatattttttgatattcattcttttttga
caGGTTCAACCGCAACAAGAGCTAAAATGCAcaaagaattcaaaattgaC
AATTCACTCAGATTACACCGCAAGTCAAACATGGCTCTTCCAACCATAGT
ACCAACTGAATCAAAATTCGAAAGCTGATGAAAATTCTTCCCCATTTAAC
AAGTGAAGATGGAGTTTCGTGACAGCGACAAATTCGGTTAACTCAACTCA
AATTTGCGATGTTGTTTTCACATTTCTTTTGCAATATGAATCTTCAGTCT
CAAACACGTTCCCCGTGTCTATATTAGATGGTGGCAGCTTCTTGTATAAT
GTGTTCCAAACAGTTGTTATTCCTGGTTATTCATGTCAAATGAGTGCAAC
TGTAATCTGCTTTTGAACTTGAACCTCTTATACATTCAATGGGACATTGT
ATGTATCAAAAATCAATTAAAGAACAATCatgtaaaagtaattttttctt
tctatgAAATGTGTTAAAGTAGACAAATTATTTACAATTTATGAATTTAG
AAtttatatcaattttctttcgttttatactatattaattttatcaaaga
ttttgaaGGATAACCTTTCTTGACACTGC Run BLAST on NCBI transcript from alignment at scaffold_193:95446..96896+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051046 ID=TCONS_00051046|Name=TCONS_00051046|organism=Clytia hemisphaerica|type=transcript|length=1451bp|location=Sequence derived from alignment at scaffold_193:95446..96896+ (Clytia hemisphaerica)
caaattaaaacCGACCgagaccgacccacctccaaaatctagggtcgggt
gacggcaaaccaacaattttttaagcccagccttAGATAAATTTTTTTAC
TTATATAGGTTCATAAGGGAATAACTGACAGTTTTTAGATGGGTGTAGCT
CAAGAAAGAGAATCCAATAAAACACGCGTACCCTGCTTCCCTCACTCAGG
AAAGAacaatataaaatgaaaaatattttttgatattcattcttttttga
caGGTTCAACCGCAACAAGAGCTAAAATGCAcaaagaattcaaaattgaC
AATTCACTCAGATTACACCGCAAGTCAAGTAAGTACCGAATGTCTGTTTA
ACTATTCAGATGTTGAAAGATGCCTGTTAAACAGATTGCCGAACtgtaaa
aatcacaaatatttGGTATGTATAGCTCAGTACATTGAAGGCTGTGAACA
AGAATTTGTAGCCTTCcgtaaattcttataaaagtcATTGCTTGAGATTT
AAATGGAGTTTGTGGTAATAATTCAGTAGTGAGAAATTCTAACATTTCTT
TAGACATGGCTCTTCCAACCATAGTACCAACTGAATCAAAATTCGAAAGC
TGATGAAAATTCTTCCCCATTTAACAAGTAAGTGTTATTTTTCTATGCGA
AGATATTTGGGCGGATGAACAGGTCAACTATATCATGATATATTCCAGTA
TACTATTTTTTAGGGAAGCTATTTCAAGTTCTgagggtttgaaatttttg
ttgaagGACTCCCTAGGGCACTCAGGCAAGAGGGGAATGTCTCACTGACC
AGAATCCCTTTTATTAGTAAAGAAATACttggaatattttaaaattcacT
AAATCTTTGAAATCAGCTAAAAATTGTCTAGGATCCATTTTTGAACACCA
GCGACACGCCAGTGACAGTAGCCCTCCCCAGGGAAATTCAGACATTAAAT
GTATACAATAATGCACAACGCTTCAAAACCTTACTGAATTTCCATGACAT
CATTAtttatcattaatttttaagGTGAAGATGGAGTTTCGTGACAGCGA
CAAATTCGGTTAACTCAACTCAAATTTGCGATGTTGTTTTCACATTTCTT
TTGCAATATGAATCTTCAGTCTCAAACACGTTCCCCGTGTCTATATTAGA
TGGTGGCAGCTTCTTGTATAATGTGTTCCAAACAGTTGTTATTCCTGGTT
ATTCATGTCAAATGAGTGCAACTGTAATCTGCTTTTGAACTTGAACCTCT
TATACATTCAATGGGACATTGTATGTATCAAAAATCAATTAAAGAACAAT
CatgtaaaagtaattttttctttctatgAAATGTGTTAAAGTAGACAAAT
TATTTACAATTTATGAATTTAGAAtttatatcaattttctttcgttttat
actatattaattttatcaaagattttgaaGGATAACCTTTCTTGACACTG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051046-exon-scaffold_193-1491911889:95446..95773 | TCONS_00051046-exon-scaffold_193-1491911889:95446..95773 | Clytia hemisphaerica | exon |
| TCONS_00051046-exon-scaffold_193-1510915933:95446..95773 | TCONS_00051046-exon-scaffold_193-1510915933:95446..95773 | Clytia hemisphaerica | exon |
| TCONS_00051046-exon-scaffold_193-1575043694:95446..95773 | TCONS_00051046-exon-scaffold_193-1575043694:95446..95773 | Clytia hemisphaerica | exon |
| TCONS_00051046-exon-scaffold_193-1491911889:95999..96072 | TCONS_00051046-exon-scaffold_193-1491911889:95999..96072 | Clytia hemisphaerica | exon |
| TCONS_00051046-exon-scaffold_193-1510915933:95999..96072 | TCONS_00051046-exon-scaffold_193-1510915933:95999..96072 | Clytia hemisphaerica | exon |
| TCONS_00051046-exon-scaffold_193-1575043694:95999..96072 | TCONS_00051046-exon-scaffold_193-1575043694:95999..96072 | Clytia hemisphaerica | exon |
| TCONS_00051046-exon-scaffold_193-1491911889:96470..96896 | TCONS_00051046-exon-scaffold_193-1491911889:96470..96896 | Clytia hemisphaerica | exon |
| TCONS_00051046-exon-scaffold_193-1510915933:96470..96896 | TCONS_00051046-exon-scaffold_193-1510915933:96470..96896 | Clytia hemisphaerica | exon |
| TCONS_00051046-exon-scaffold_193-1575043694:96470..96896 | TCONS_00051046-exon-scaffold_193-1575043694:96470..96896 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_193 | supercontig | scaffold_193:95446..96896 + |
Blast
The following BLAST results are available for this feature:
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