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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051118 ID=TCONS_00051118|Name=TCONS_00051118|organism=Clytia hemisphaerica|type=transcript|length=233bp GGTTTGAAAGCAGATTGTACGATTAAAATGAAAGATGAAGATTGTTTCAA AATGATGATCGGACAAATCAACCCACAAACTTCATTTATGCAAGGCAAAA TCAAAATCTCGGGCAATATGGCGCTGGCTATGAAATTACAACAACTAAAG GTAACCAATCTGAAGTCCAAAATGTAGTAGTGATGTATTGCTTATAAGAT GTTTTGGGATTACATTCGAATATATATGTTGTA Run BLAST on NCBI transcript from alignment at scaffold_197:47496..50436- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051118 ID=TCONS_00051118|Name=TCONS_00051118|organism=Clytia hemisphaerica|type=transcript|length=2941bp|location=Sequence derived from alignment at scaffold_197:47496..50436- (Clytia hemisphaerica) GGTTTGAAAGCAGATTGTACGATTAAAATGAAAGATGAAGATTGTTTCAA
AATGATGATCGGACAAATCAACCCACAAACTGTAAGTTTCAAAGTTATTT
TTCCATGGTATCTTTAACTGCATTAAAGGAAGAAAATTTCTACCAAAATT
AAGTTACTCTTTTCATTTCCCCAAATGTGTGCTATTTCAGGCTTTAAAAC
AGGTTTTTCCTTTTTTAATGGCGTTTTTTGGACAATATCCTTCGTCCGCC
AAATAAAATTCCGCCAAATTAAATTTTTCAAGTTAGACTCCAATTAAATT
CCCTCTGAAAAAAACTTTTCCGCCATTCGCCTAATTAAATTGACGTCACA
ATTTTTTCCTTTAAAGTAATCACGCTTGTTGAACTCTTACGTAAATCTTA
TAACAATAGCATTCAGTTTGAGGTTGTTGTTGTTATTTTCTGCCCGCGCA
GTTTGATTATTCGCCCGATAGTGTCATTTGGTGCCCTCAAATGGCACTAG
AGGGCTAATAATCAAACTGCAAGGGCAGAATTAATGACAGCAACGAACGA
AAACTTAACGCTATTACTATTATTATTCATATCAGACATTCAAAGAACGT
TTTTTCTAGCGTCAACCAAGTATTTTTGCTTCAATGCAATCTCTTCAACT
AATTTTTGGCACCTTGCGAGCGGGCCGCAAATGACCAAAAAGTGTTTTTT
TTTTGACGTTATTTAGTCTCTTCGCTTCAATGCAACGACTTCAATCCAAT
TCCGAGCGGGCCGCAAATGACGTTATTGCCCTATACCCGGGCGGTTAATG
ATATTTCAGCCCTCTGAAGCATGGCGCTTTAGTTTCCTCAGCGCGGGTAT
GACAATTTGAATCACCAAACCTTTCAATACCGCCCGCCGATTGAACCTTT
AATGGCTTACTTAATCTTCTATACTAAATGAGTTTATGAAAAACTTTGTA
ACGCTAGCCCAGTAACATATGTTAAGGTTTCTAAGATTTGAACGCCGCGG
CTGGAAAACCTATCCACCTTCGAGACAAAAAGTCTTGCGCTAAGTTTGAC
AAGCGTAGAAAATTCGGATTAGAGAAGACTCTACACTGCTATTTGTAAAA
GAGAGTGAGGGCAATATTTTGGACCAAGAGATATACATTAGAATAAATAT
AAATATTATAAGACTAAATTAGTTAAAAACGAATAATAAGAGGCAAACAA
ATCAAGTANATGAAAAAGTACTGCGACGTCACAAAGTTTCAAATAAAAAG
GTGTGGCATTTTTGTTGCACGATTTCGAATTATTTTATATCAACACACGC
TTTGTTTGATGATTAAACTTCATCTAACATTATTTAAACAGGTTTCAATG
TTGGTTGCATTGCATATGCGCCGGTCTTAAGCTGTCCTCATGTGAAGCCA
ACAAACGGGAAAACCTTCAGTGCTCAACCGCAAAGCGCGAGCCTCTCCTT
CACAACTAAGGCTTTTTCTTTCCTAGAAGCAACCCTCTCACCACCTCCGA
CACCTTTGGGCGTCTGCAACGACGGGTACCCTCCATAATTTTGACAGGGT
CACTATGGCATTTCATTGAACACAAACTTCCATTACCTTAAAAAGACATA
TAATCGAGGCTTACAGACACAAAATGTTGACTAATGTAAAAAGTTTAGAA
GTATAATTTTTTTTATTGTATTCGGCATTTTAAGCCANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAAACGATGTCAGGAATTAACCCACATTATAGTATTTTAAAGGCTTTT
GATGTGCAAGCAAAACCGTTAACCGGCGTTTGCGACGACGGGAACCGTCT
AGTGACCGCTATATGAATAATAATAAATGTTTCCGACTTATTTTGAAAAG
GCGGACTCGGTAAATTAATCCGAAAATTTAATAAGCGGAGGGCCCGTTTA
TTTGGAACCTAAGATTAAATTCGTTTTTTGTAAATTATATACGACCCTTT
TTACTCTGTAAAAACGTTTTACCACACTCTTCACATTGAAAACGTTTTAC
CACATTCTTTACATTGAAAATGTTTTACCACGCGCTTCACATCGAAAATG
TTTAACCACGCTCTTCACATCGAAAATGTTTAACCACACTCTTCGCATTG
AAAATGTTTTACCACGCTCTTCGCATTGAAAATGTTTTACCACGCTCTTC
GCATTGAAAATGTTTTACCACTCTTCACATTGAAAACGTTTTACCACAAT
CTTTACATTGAAAATGTTTTACCACGCGCTTCACATCGAAAATGTTTAAC
CACGCTCTTCACATCGAAAATGTTTAACCACGCTCTTCGCATTGAAAATG
TTTTACCACGCTCTTCGCATTGAAAATGTTTTACCACGCTCTTCGCATTG
AAAATGTTTTACCACGCTCTTCGCATTGAAAATGTTTTACCACACTCTTC
ACATCGAAAATGTTTAACCGCGCTCTCTTCACATTGAAAATGTTTTTGCA
CACACTTCACATTGAAAACGTTTTACCACACTCTTCACATTGAAAATGTT
TAACCGCGCTCTTCACATTGAAAATGTTTTTGCACACTCTTCACATTGAA
AATGTTTTACCACACTTTTTACATTTAAAATGTTTTACCACACTTTTCAC
ATTGAAAATGTTTTACCACAGTCTTTTATCTCCATACAGTCATTTATGCA
AGGCAAAATCAAAATCTCGGGCAATATGGCGCTGGCTATGAAATTACAAC
AACTAAAGGTAACCAATCTGAAGTCCAAAATGTAGTAGTGATGTATTGCT
TATAAGATGTTTTGGGATTACATTCGAATATATATGTTGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00051118-exon-scaffold_197-1575043694:50356..50436 | TCONS_00051118-exon-scaffold_197-1575043694:50356..50436 | Clytia hemisphaerica | exon |
TCONS_00051118-exon-scaffold_197-1575043694:47496..47647 | TCONS_00051118-exon-scaffold_197-1575043694:47496..47647 | Clytia hemisphaerica | exon |
TCONS_00051118-exon-scaffold_197-1510915933:50356..50436 | TCONS_00051118-exon-scaffold_197-1510915933:50356..50436 | Clytia hemisphaerica | exon |
TCONS_00051118-exon-scaffold_197-1510915933:47496..47647 | TCONS_00051118-exon-scaffold_197-1510915933:47496..47647 | Clytia hemisphaerica | exon |
TCONS_00051118-exon-scaffold_197-1491911889:50356..50436 | TCONS_00051118-exon-scaffold_197-1491911889:50356..50436 | Clytia hemisphaerica | exon |
TCONS_00051118-exon-scaffold_197-1491911889:47496..47647 | TCONS_00051118-exon-scaffold_197-1491911889:47496..47647 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_197 | supercontig | scaffold_197:47496..50436 - |
Blast
The following BLAST results are available for this feature:
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