TCONS_00051123 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051123
Unique NameTCONS_00051123
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051123 ID=TCONS_00051123|Name=TCONS_00051123|organism=Clytia hemisphaerica|type=transcript|length=179bp
NAAGGAAGATTTCAAGTCACTAGGGCTTACAGATAATTCTACTATCATGA
GATTGAGAATTAAATGTTGTTCATTTGGTGGTGAAAGTCCAGGTAAAGTT
TTGACAAATGGTGCACCAAAATTTTTAATTCCTAAACAAGTACTTGAAAA
CTTTCTGGAAGATGGATGTTTAATTGAAG
Run BLAST on NCBI

transcript from alignment at scaffold_197:2698..2876

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051123 ID=TCONS_00051123|Name=TCONS_00051123|organism=Clytia hemisphaerica|type=transcript|length=179bp|location=Sequence derived from alignment at scaffold_197:2698..2876 (Clytia hemisphaerica)
CTTCAATTAAACATCCATCTTCCAGAAAGTTTTCAAGTACTTGTTTAGGA
ATTAAAAATTTTGGTGCACCATTTGTCAAAACTTTACCTGGACTTTCACC
ACCAAATGAACAACATTTAATTCTCAATCTCATGATAGTAGAATTATCTG
TAAGCCCTAGTGACTTGAAATCTTCCTTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032410XLOC_032410Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051123-exon-scaffold_197-1491911889:2698..2876TCONS_00051123-exon-scaffold_197-1491911889:2698..2876Clytia hemisphaericaexon
TCONS_00051123-exon-scaffold_197-1510915933:2698..2876TCONS_00051123-exon-scaffold_197-1510915933:2698..2876Clytia hemisphaericaexon
TCONS_00051123-exon-scaffold_197-1575043694:2698..2876TCONS_00051123-exon-scaffold_197-1575043694:2698..2876Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_197supercontigscaffold_197:2698..2876 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051123 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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