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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051160 ID=TCONS_00051160|Name=TCONS_00051160|organism=Clytia hemisphaerica|type=transcript|length=943bp
aaaaaaaaaaaaaaaaacgaacggtgatttggagacatgtcaactttgct
tcaTACCGTCctcctcgatttatctcgaatacataaactcgctattgtca
ACCCAAGGTCGGGAAATCTTCACTCAATCATTGAACTTACCAAGTTAACC
CAGGGTCGGAAAATCTTTAACTGCGCTCGATCATTAAATTTAACAAGAAC
GCTGCTTTCTGATACTGGAATGCAAGACGGTTAAACCAGAAACATCATTg
caatgaagccacttatttcccaaccAAAATGCGTGACCCGCATTGTTTta
acacaaatgacagattgaaagtaaaaccaaTCACCAGATTTCGAAAGGAT
AAGATTTAATCCGTCATTCTAAATACGGTGCAAATCCTAAGgcttcgttt
ttttttgtttgagaaaggttaaagattcatcTTTAGCCTCTTGGGGTTTT
AAATCACATTGTGATTGTCTTTTTAACCACCATcaagcattttttataag
aacatctataTTCTTTAAAGCCCTCGGATGTACTCCGCTTTTTCAGTTTT
AGGCCCAAAAATAGTTGAaataatgttcttattttacaccattttgtgaa
aattcCGAAGAAAAGAAATTGGACCTTAAAATATTCTGGGTAGACTTTTG
GTCTTATGAagttagttcttataaaaaaacttggaCGTTCAACTACATAA
ATTTTAGGACCTATTATAACTGGCTGACCTATAATTGATGGCTGTAATCA
GAGGAAtataaagagatggaaaaacagctgattactcaaagttcaacggt
CACTCCTATTGGAAATTCTACTgtaaaaacattgattaggTCATTTGAAA
GCCCAGAAatggctcgccatacaaatcggacggtttctacatgatttgac
gataaaaatgaaaatttgtttttcctttttttttttttttttt Run BLAST on NCBI transcript from alignment at scaffold_199:142393..143335 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051160 ID=TCONS_00051160|Name=TCONS_00051160|organism=Clytia hemisphaerica|type=transcript|length=943bp|location=Sequence derived from alignment at scaffold_199:142393..143335 (Clytia hemisphaerica)
aaaaaaaaaaaaaaaaaaggaaaaacaaattttcatttttatcgtcaaat
catgtagaaaccgtccgatttgtatggcgagccatTTCTGGGCTTTCAAA
TGAcctaatcaatgtttttacAGTAGAATTTCCAATAGGAGTGaccgttg
aactttgagtaatcagctgtttttccatctctttataTTCCTCTGATTAC
AGCCATCAATTATAGGTCAGCCAGTTATAATAGGTCCTAAAATTTATGTA
GTTGAACGtccaagtttttttataagaactaactTCATAAGACCAAAAGT
CTACCCAGAATATTTTAAGGTCCAATTTCTTTTCTTCGgaattttcacaa
aatggtgtaaaataagaacattattTCAACTATTTTTGGGCCTAAAACTG
AAAAAGCGGAGTACATCCGAGGGCTTTAAAGAAtatagatgttcttataa
aaaatgcttgATGGTGGTTAAAAAGACAATCACAATGTGATTTAAAACCC
CAAGAGGCTAAAgatgaatctttaacctttctcaaacaaaaaaaaacgaa
gcCTTAGGATTTGCACCGTATTTAGAATGACGGATTAAATCTTATCCTTT
CGAAATCTGGTGAttggttttactttcaatctgtcatttgtgttaAAACA
ATGCGGGTCACGCATTTTggttgggaaataagtggcttcattgcAATGAT
GTTTCTGGTTTAACCGTCTTGCATTCCAGTATCAGAAAGCAGCGTTCTTG
TTAAATTTAATGATCGAGCGCAGTTAAAGATTTTCCGACCCTGGGTTAAC
TTGGTAAGTTCAATGATTGAGTGAAGATTTCCCGACCTTGGGTtgacaat
agcgagtttatgtattcgagataaatcgaggagGACGGTAtgaagcaaag
ttgacatgtctccaaatcaccgttcgttttttttttttttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051160-exon-scaffold_199-1491911889:142393..143335 | TCONS_00051160-exon-scaffold_199-1491911889:142393..143335 | Clytia hemisphaerica | exon |
| TCONS_00051160-exon-scaffold_199-1510915933:142393..143335 | TCONS_00051160-exon-scaffold_199-1510915933:142393..143335 | Clytia hemisphaerica | exon |
| TCONS_00051160-exon-scaffold_199-1575043694:142393..143335 | TCONS_00051160-exon-scaffold_199-1575043694:142393..143335 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_199 | supercontig | scaffold_199:142393..143335 . |
Blast
The following BLAST results are available for this feature:
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