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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051205 ID=TCONS_00051205|Name=TCONS_00051205|organism=Clytia hemisphaerica|type=transcript|length=1455bp
ATGGTATtgtctttttcaaaataagtaTTATCTATTTTTGATCTTTAAAA
ACTGAAGGTAGTAtgacaaaaaaactttacaaaaaattGGCTCCATTTAT
CAGAAATTTTTCCCCATTCTAGTACTATAAACACAGGAAATCAAGTTGAA
TATGATAATTCTTTGAGAATATTGTGTGGGGTAATTCACGATGCTTGATA
ATGATATCAACAGGGAAAAGTTTTCTAATAAatcatatttttctattttc
caaAACATAATTTAAGTGCAGCATATTATCTAAAAAACATTCGAGAATTT
TGACGATTACTTAGTACATTCATTCGTTCAAAAGTGTGCACTAATACTTT
CGAAAAAACCTAATTTTATGCTGTTTTTTTCACTTAGCCACCTTCTAGAG
GTGAATAGCTGAATTCAGAAGGCTTCAAACAATGTCTGTACAAAAATAAA
GTTTCTAGCACCAAACGATTACGTTTTTTAATGCGttttacattttcatt
tcaaattctttttctcaaatttttttttgaagatcGTACGTAGTGCTctt
aattatcttttcaacgatatttaatttgtaatttttaaagaaattgaagc
attggttgaaaaatggcaagcaaaaaaaaaattagtgcaCACTTGAAGCG
ATTGTACTTTCCTCCTACTTTCAAAGCACTTGACAATTCTAGGTAATTTT
ACGTTAAGACAATTTTTGACCATCATTGTAACACATTTTCGTGGATATTC
AAATGTCCGTAATTTGAACCGTATCAGTTAATTGGACAGTGAACCGAACc
ttcattttattatttagaaTAAGCTGAGATGAAATTTACTGCAATAATCA
TAACAAATCGAACTCAGCCCTTAGCAAGGATGAtcaatataaaatatttt
tagcaaCATACACGCTACTAAGATACTTTAAGGCTAGagtgtgtccgaaa
aaaagcTGACAATTATACAaagagaaaatcttttaaacttaTACCAATTT
ACACATTTCGTTTTTCGAAAcctttcattgaatttaaagtCACCCAAACA
AAAATCTTTGCATCTTACGGAAATAATTTTCgattataaaaaactttttc
tggaCACACTGTAAAGGGGGCTGAAAATAATTCAGCAAGTCAACGGTACA
AGTTATATAGAgaataaatatataaaaagtaaaacttGCATCTATATAAG
TTATAATACATAACAACGTGGCGTAGAGAATAATAGGGTATATacacaaa
aaactttcaataagaTTCTCTTTAACTTCGGGGTAAATTGTCCTTAATTT
GCTTACCGCGTTAACTCATTTGCTTTATTGAGCATTTTTTTAGTCAATTC
TGAAATCtgggattgttcttaatttgttcttaggttttggccaaaaattg
agcCTCATGACCATGTTGATCCTTAATACTGGCTCAATTCTGGCCAAAAT
CTAAT Run BLAST on NCBI transcript from alignment at scaffold_2:174765..176219 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051205 ID=TCONS_00051205|Name=TCONS_00051205|organism=Clytia hemisphaerica|type=transcript|length=1455bp|location=Sequence derived from alignment at scaffold_2:174765..176219 (Clytia hemisphaerica)
ATTAGATTTTGGCCAGAATTGAGCCAGTATTAAGGATCAACATGGTCATG
AGgctcaatttttggccaaaacctaagaacaaattaagaacaatcccaGA
TTTCAGAATTGACTAAAAAAATGCTCAATAAAGCAAATGAGTTAACGCGG
TAAGCAAATTAAGGACAATTTACCCCGAAGTTAAAGAGAAtcttattgaa
agttttttgtgtATATACCCTATTATTCTCTACGCCACGTTGTTATGTAT
TATAACTTATATAGATGCaagttttactttttatatatttattcTCTATA
TAACTTGTACCGTTGACTTGCTGAATTATTTTCAGCCCCCTTTACAGTGT
GtccagaaaaagttttttataatcGAAAATTATTTCCGTAAGATGCAAAG
ATTTTTGTTTGGGTGactttaaattcaatgaaaggTTTCGAAAAACGAAA
TGTGTAAATTGGTAtaagtttaaaagattttctcttTGTATAATTGTCAg
ctttttttcggacacactCTAGCCTTAAAGTATCTTAGTAGCGTGTATGt
tgctaaaaatattttatattgaTCATCCTTGCTAAGGGCTGAGTTCGATT
TGTTATGATTATTGCAGTAAATTTCATCTCAGCTTAttctaaataataaa
atgaagGTTCGGTTCACTGTCCAATTAACTGATACGGTTCAAATTACGGA
CATTTGAATATCCACGAAAATGTGTTACAATGATGGTCAAAAATTGTCTT
AACGTAAAATTACCTAGAATTGTCAAGTGCTTTGAAAGTAGGAGGAAAGT
ACAATCGCTTCAAGTGtgcactaattttttttttgcttgccatttttcaa
ccaatgcttcaatttctttaaaaattacaaattaaatatcgttgaaaaga
taattaagAGCACTACGTACgatcttcaaaaaaaaatttgagaaaaagaa
tttgaaatgaaaatgtaaaaCGCATTAAAAAACGTAATCGTTTGGTGCTA
GAAACTTTATTTTTGTACAGACATTGTTTGAAGCCTTCTGAATTCAGCTA
TTCACCTCTAGAAGGTGGCTAAGTGAAAAAAACAGCATAAAATTAGGTTT
TTTCGAAAGTATTAGTGCACACTTTTGAACGAATGAATGTACTAAGTAAT
CGTCAAAATTCTCGAATGTTTTTTAGATAATATGCTGCACTTAAATTATG
TTttggaaaatagaaaaatatgatTTATTAGAAAACTTTTCCCTGTTGAT
ATCATTATCAAGCATCGTGAATTACCCCACACAATATTCTCAAAGAATTA
TCATATTCAACTTGATTTCCTGTGTTTATAGTACTAGAATGGGGAAAAAT
TTCTGATAAATGGAGCCaattttttgtaaagtttttttgtcaTACTACCT
TCAGTTTTTAAAGATCAAAAATAGATAAtacttattttgaaaaagacaAT
ACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051205-exon-scaffold_2-1491911889:174765..176219 | TCONS_00051205-exon-scaffold_2-1491911889:174765..176219 | Clytia hemisphaerica | exon |
| TCONS_00051205-exon-scaffold_2-1510915933:174765..176219 | TCONS_00051205-exon-scaffold_2-1510915933:174765..176219 | Clytia hemisphaerica | exon |
| TCONS_00051205-exon-scaffold_2-1575043694:174765..176219 | TCONS_00051205-exon-scaffold_2-1575043694:174765..176219 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:174765..176219 . |
Blast
The following BLAST results are available for this feature:
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