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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051538 ID=TCONS_00051538|Name=TCONS_00051538|organism=Clytia hemisphaerica|type=transcript|length=978bp
gaaaaaaacaattaaaaaatatgGCTAAACTATCAATGACTTGTTTGTTG
ACTGTagtgattttgagcctcgttctGGTGGCAAAAGAGGCTGAAGGACT
TTCAGTTTTTGGAGAAGAAGCTGTTGGCAAGGGCAACAAATCAGTGTCGG
AAAAGATGCGGCAATTCTGCAAACTCCGCCCTTTCCTTTGTGAGAATATA
TTGAACCCAGGGATGAAGAGCCAACAGAAACGTAAGCAGAATATCAGATT
GGTCAAAATGATGGCTAAAGCACTCATAAAGCGATGAGACGGTGTCAAAG
TTGACAAGGAAAGTtatattccagaaaaaaattcgaaatctagtgctgtt
tcaacgttcatttaacgttatttTGACGTCGTGGCTGTTAGATGGACGCC
TTATAGACGTTGTATTAACGTTGTATCAACGTTTTGAGAGCTATGACATG
GTTGTAAGACTGTTCAAATGGATAATAAGTAAAAGGCAAGTGAAACGTTG
AAAATGAGTTGGTCAGAGACGGTGAATTGGGAGAAATCCATCTCCACATT
GCTAGTGTGTTGGAATCCACCAACTACTACACTAACGGAAGGTTTAGGCA
TGCGACCACAGATATTAATCATGAATATTGCCGTTATGTATTAccatgaa
gtgaatacagtcatattgttttctgaccagccaccagattTCTCCCAATT
CACCGTCTCTGACCAGTCAGTAGACAAGATTTCACTTCCAGCTCTAGCGA
GTGGCAATTGAGTCCTCATTGGACCCGCagctcaatggtagagcaaatgc
ccgcgaatggcatgttgtgagttcgagtctcgccggatccgttggctttc
caacggttctggtagCTGGTCAGAAATCAATacgagagcgactgtattca
cttcattgtaatacataaggGCAGTATCAAATTTCTTCTTGAAAAGCCCA
GGCGTCAAATCGGCaaagaataaaagag Run BLAST on NCBI transcript from alignment at scaffold_202:872374..873503+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051538 ID=TCONS_00051538|Name=TCONS_00051538|organism=Clytia hemisphaerica|type=transcript|length=1130bp|location=Sequence derived from alignment at scaffold_202:872374..873503+ (Clytia hemisphaerica)
gaaaaaaacaattaaaaaatatgGCTAAACTATCAATGACTTGTTTGTTG
ACTGTagtgattttgagcctcgttctGGTGGCAAAAGAGGCTGAAGGACT
TTCAGTTTTTGGAGAAGAAGCTGTTGGCAAGGGCAACAAATCAGTGGTGA
GTTTTTGATGGTACATATTAAGAAATTTGTCACCAAAGCAATATTTAATC
ACCTTTTTAACGATAAAGGTATAAAGgattttttatcttgaaatataGGA
ACAtttggaaataaaaatttaatttttttgtctttcctTTTATTACAGTC
GGAAAAGATGCGGCAATTCTGCAAACTCCGCCCTTTCCTTTGTGAGAATA
TATTGAACCCAGGGATGAAGAGCCAACAGAAACGTAAGCAGAATATCAGA
TTGGTCAAAATGATGGCTAAAGCACTCATAAAGCGATGAGACGGTGTCAA
AGTTGACAAGGAAAGTtatattccagaaaaaaattcgaaatctagtgctg
tttcaacgttcatttaacgttatttTGACGTCGTGGCTGTTAGATGGACG
CCTTATAGACGTTGTATTAACGTTGTATCAACGTTTTGAGAGCTATGACA
TGGTTGTAAGACTGTTCAAATGGATAATAAGTAAAAGGCAAGTGAAACGT
TGAAAATGAGTTGGTCAGAGACGGTGAATTGGGAGAAATCCATCTCCACA
TTGCTAGTGTGTTGGAATCCACCAACTACTACACTAACGGAAGGTTTAGG
CATGCGACCACAGATATTAATCATGAATATTGCCGTTATGTATTAccatg
aagtgaatacagtcatattgttttctgaccagccaccagattTCTCCCAA
TTCACCGTCTCTGACCAGTCAGTAGACAAGATTTCACTTCCAGCTCTAGC
GAGTGGCAATTGAGTCCTCATTGGACCCGCagctcaatggtagagcaaat
gcccgcgaatggcatgttgtgagttcgagtctcgccggatccgttggctt
tccaacggttctggtagCTGGTCAGAAATCAATacgagagcgactgtatt
cacttcattgtaatacataaggGCAGTATCAAATTTCTTCTTGAAAAGCC
CAGGCGTCAAATCGGCaaagaataaaagag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051538-exon-scaffold_202-1491911889:872374..872519 | TCONS_00051538-exon-scaffold_202-1491911889:872374..872519 | Clytia hemisphaerica | exon |
| TCONS_00051538-exon-scaffold_202-1510915933:872374..872519 | TCONS_00051538-exon-scaffold_202-1510915933:872374..872519 | Clytia hemisphaerica | exon |
| TCONS_00051538-exon-scaffold_202-1575043694:872374..872519 | TCONS_00051538-exon-scaffold_202-1575043694:872374..872519 | Clytia hemisphaerica | exon |
| TCONS_00051538-exon-scaffold_202-1491911889:872672..873503 | TCONS_00051538-exon-scaffold_202-1491911889:872672..873503 | Clytia hemisphaerica | exon |
| TCONS_00051538-exon-scaffold_202-1510915933:872672..873503 | TCONS_00051538-exon-scaffold_202-1510915933:872672..873503 | Clytia hemisphaerica | exon |
| TCONS_00051538-exon-scaffold_202-1575043694:872672..873503 | TCONS_00051538-exon-scaffold_202-1575043694:872672..873503 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:872374..873503 + |
Blast
The following BLAST results are available for this feature:
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