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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051547 ID=TCONS_00051547|Name=TCONS_00051547|organism=Clytia hemisphaerica|type=transcript|length=1050bp
tagAATAGGATTATACTGCGACTGCAGGCTCACTTGACTCTCTTGAAGTA
CTCTCATTCAGTCTCTCATTCTTGATGATTCATAGATTCTGATTTTGAGA
TATTTGATGATTGCCTTTCTTTACATTCTTCAGGTGACAATGAAGGAATT
GTATTAGCGGACTTTTTGCTTCGAATACCTTCCAAAATTAAGAGAACCAA
GATTCGATTTTGGAAGACTGCATGTATTCATTCATTTTGCAAGGTTTTGG
ACAATATTGATGAAGTTGCTCGGGAGAGATACTGTAGAATCGTATACCAA
GAAGATCCTGACTTGTATCGAAGTCGAAGACTGTTTCTGAAGAACAGTGA
tgatattttacaaaatataaaagcAGACTATCCGAGTTATACTATTGAAC
AGTTTGTTGCAGATTTTGTGGCTATCGATTCTGGTTTCATCAATATCTCC
AAACACATGAATGAATTCATTGAAAGCTTACCTGAAAAAAAAGCTAAGCA
ATAATCGCTCAATGTGTATTTTGGCCTCTAAATATTTAATTGAATTGTTT
CTGTCAAGATTGTTTGCAcagtttttcacatttttaattAGTAGTTTCGT
TATCTGTTATTGGGaatgaatttaaatattttatatatcaatatttttca
ggttttgtaCAAACTTTACTCAACTCAAAAAAATACCAGTTCAGATCAGC
CATCAAAATGTTCGATAAAGCCCTTATGGCTGAAACCGAAAAGGGTATTA
AAACTTTCACTTTTTAAACTAGCATTACTCTTTACCGATAAAAGTCATCA
GACGAAGAAATTGTCATGGATATTTTCAtttgttgtttttgtgaacTTTT
ACATTCTTGGAAAGTATTCTATGAAAATCTGAAGAGGGTTACTTTTCATG
AATTATATAATGGAAATAAGTCAAAaactattttgatttaaaatttcagc
ataaattgaataaattataaatctttcatttgaTTCTATtaaattcaatc
aatttttctATCTATTTTTTTCACCTATTTTCCTGACATTGTCTCTTTCC Run BLAST on NCBI transcript from alignment at scaffold_202:1039311..1040454+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051547 ID=TCONS_00051547|Name=TCONS_00051547|organism=Clytia hemisphaerica|type=transcript|length=1144bp|location=Sequence derived from alignment at scaffold_202:1039311..1040454+ (Clytia hemisphaerica)
tagAATAGGATTATACTGCGACTGCAGGCTCACTTGACTCTCTTGAAGTA
CTCTCATTCAGTCTCTCATTCTTGATGATTCATAGATTCTGATTTTGAGA
TATTTGATGATTGCCTTTCTTTACATTCTTCAGGTGACAATGAAGGAATT
GTATTAGCGGACTTTTTGCTTCGAATACCTTCCAAAATTAAGAGTAAGTA
TCGTATACAATGCATGTCGTTTCATGGTCATAAATAACTCCCTCACAGGT
GGGGAAATTCTTGTTTTAATGTGATTCTTTTCTATAGGAACCAAGATTCG
ATTTTGGAAGACTGCATGTATTCATTCATTTTGCAAGGTTTTGGACAATA
TTGATGAAGTTGCTCGGGAGAGATACTGTAGAATCGTATACCAAGAAGAT
CCTGACTTGTATCGAAGTCGAAGACTGTTTCTGAAGAACAGTGAtgatat
tttacaaaatataaaagcAGACTATCCGAGTTATACTATTGAACAGTTTG
TTGCAGATTTTGTGGCTATCGATTCTGGTTTCATCAATATCTCCAAACAC
ATGAATGAATTCATTGAAAGCTTACCTGAAAAAAAAGCTAAGCAATAATC
GCTCAATGTGTATTTTGGCCTCTAAATATTTAATTGAATTGTTTCTGTCA
AGATTGTTTGCAcagtttttcacatttttaattAGTAGTTTCGTTATCTG
TTATTGGGaatgaatttaaatattttatatatcaatatttttcaggtttt
gtaCAAACTTTACTCAACTCAAAAAAATACCAGTTCAGATCAGCCATCAA
AATGTTCGATAAAGCCCTTATGGCTGAAACCGAAAAGGGTATTAAAACTT
TCACTTTTTAAACTAGCATTACTCTTTACCGATAAAAGTCATCAGACGAA
GAAATTGTCATGGATATTTTCAtttgttgtttttgtgaacTTTTACATTC
TTGGAAAGTATTCTATGAAAATCTGAAGAGGGTTACTTTTCATGAATTAT
ATAATGGAAATAAGTCAAAaactattttgatttaaaatttcagcataaat
tgaataaattataaatctttcatttgaTTCTATtaaattcaatcaatttt
tctATCTATTTTTTTCACCTATTTTCCTGACATTGTCTCTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051547-exon-scaffold_202-1491911889:1039311..1039503 | TCONS_00051547-exon-scaffold_202-1491911889:1039311..1039503 | Clytia hemisphaerica | exon |
| TCONS_00051547-exon-scaffold_202-1510915933:1039311..1039503 | TCONS_00051547-exon-scaffold_202-1510915933:1039311..1039503 | Clytia hemisphaerica | exon |
| TCONS_00051547-exon-scaffold_202-1575043694:1039311..1039503 | TCONS_00051547-exon-scaffold_202-1575043694:1039311..1039503 | Clytia hemisphaerica | exon |
| TCONS_00051547-exon-scaffold_202-1491911889:1039598..1040454 | TCONS_00051547-exon-scaffold_202-1491911889:1039598..1040454 | Clytia hemisphaerica | exon |
| TCONS_00051547-exon-scaffold_202-1510915933:1039598..1040454 | TCONS_00051547-exon-scaffold_202-1510915933:1039598..1040454 | Clytia hemisphaerica | exon |
| TCONS_00051547-exon-scaffold_202-1575043694:1039598..1040454 | TCONS_00051547-exon-scaffold_202-1575043694:1039598..1040454 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:1039311..1040454 + |
Blast
The following BLAST results are available for this feature:
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