TCONS_00051550 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051550
Unique NameTCONS_00051550
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2105

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051550 ID=TCONS_00051550|Name=TCONS_00051550|organism=Clytia hemisphaerica|type=transcript|length=2105bp
aacaaaaaaaaaaacaagaaataaaaattgGATATGAATGTTATAAATTG
TTGGGGTGTTGGCTCAGTCCGTCAACATTCTGGTTTCTGTTGTGGAGACA
AATACTACGCACCGATTGGACGATGTTTGGTCACGTGGGAcatgaaaatc
aaagaaagcgAACCTGTTCGACAAATACACAATGACTTAATCACTGTCAT
GATACCGAATAAACTAGATGAAATTCTAACTGTTGGTTATGGTGGTCAAG
TGAAGCTCTGGTCAAAAGACTGGCAATTGCTAACATCGTTTCAATCAGAC
ACTAAGAATGTGATCTACGGTTCCTGGTCCCCTGATGGAAGCGAATTCTC
ATTCAGTTCTAAAGGACCCAAACAAATGTTGGCTGTTTACAAGAAAGATA
CTCTCATCGAACAATATACTCAAAACGTCAAGATTACTCCCAAATGGATT
TACCAAGCTCCACAGACAAGTAAAAAAGAGGTAAAAGGTCGAAAATCCTA
TGACATGTTCAATGCATCTATCCACAAAGATAATCTAGAGATTCTAGCTG
CTTACTGCACGAGAGAGGGTTGTGAGTTATTTCTCATCTCTCAAAGTGGC
GATACCATAAAACGCGGACCAATTTCGCCTATAGGGGACCCCAAAAACGA
TATGCAGTGCGTCTCCGAGATCAATAACGATAGAATCGCTATAGGCGTAC
AGCATGGGATATTTGGCTTTTACCACATAGACACTTTGGATTTGTTGACA
GTCATCCAAGCTACGGGATCACCAAGGATTTGCATGTGGGATAGTGACTT
GTTTGTCACCACAGCTTATGTGTCTGGAATCATATCCTTTTGGAGTCAAG
ATGGccaattattgaaagaaatTAAGGGAGGACCTATTGGATCTATCGTA
CAAATGAACAGAGTCGAACAATTTACATATTACATTTGCGGTATCATGTC
TCTACACAAGGTATCTTTCGATTATGAAAATAGTTGCATAGCAAGCATAG
ATGATATTTCTTATTTAACATTGACTGATTGTGGTTTAGATATAAGTAAT
ACCGGTCTAGTGGCTTCTGGTGATTTTACTGGGAATATTTATCTATGGCA
AACACCTTCAAGAAAATCTGTTTGTTCCTTCAATGTTACATATTCAATTC
GCTGTTTGCTTTGGGTTGGCGATTTTCTACTGATTGGTTGTCTCAACTCT
GAAGTAAGTTGTTGGAAATATAATTCAAAGGTCACCCCGGAGAAAGAAGT
GAACAGTGTTCGGAATCTGTATACTGTTATTGGTGACCCAGTTGCCTTGG
CAACGAATTCGGATGAATCCAAATTAGCTTTGGGAACTACAGCAGGATAT
TTGTATGTTTTcgatttgaagaaaaatgaagaatctttggatattgaagt
ttttcattGTAGCCAGATTCACAAACCCAAGGTGAATAATGATGGCTCCT
TCTTGAACATGGAGATTTGGAATTTGAGATGGAGTATTGACGACCGTTAC
ATAGCAACGACTTCTGAAGATCAAACTGCCATCGTTTCAGATTCTTTAAC
AgGTgaagttttaaaaacattgaCTGGTCACACCACAGCCGTAACTGACC
TCAGTTGGAAACTTTTAGCCTCTGGAAAACACGTTCTTGCAACATGTGCT
GACGACCGAACGGTCCGCGTGTACGATGGATTGACATTTGAACTCATCAC
TGTTCTTAAAACAGAACTTGTATATGGTTGGTATACCCTAACTTATAtgg
aaatcaatgaaaaaaatgatcGATTATTTGTAACTACGCAAAATGGTTAC
TTATTGTCATGGGACTTGAATTCTTTTGAATTGATTTACTGTGAGAAATT
GCATGCTGGATCTATTGAAGGAATCGCACTTTCGAAGGATGGACAATCTC
TGGNTTGAATTGATTTACTGTGAGAAATTGCATGCTGGATCTATTGAAGG
AATCGCACTTTCGAATGATGGACAATCTCTGGTAACTCTTGGTTCAGATT
GTGTTGTAAACATGCTGGAAACCTTGTAACTTCCAAGCTGAAGCCATTTG
GTCAAGTTGGGACGTTAACATGTGATTACCGGAGTGGCCGATACCCGAAT
CAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_202:1048322..1061903+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051550 ID=TCONS_00051550|Name=TCONS_00051550|organism=Clytia hemisphaerica|type=transcript|length=13582bp|location=Sequence derived from alignment at scaffold_202:1048322..1061903+ (Clytia hemisphaerica)
aacaaaaaaaaaaacaagaaataaaaattgGATATGAATGTTATAAATTG
TTGGGGTGTTGGCTCAGTCCGTCAACATTCTGGTTTCTGTTGTGGAGACA
AATACTACGCACCGATTGGACGATGTTTGGTCACGTGGGAcatgaaaatc
aaagaaagcgAACCTGTTCGACAAATACACAATGACTTAATCACTGTCAT
GATACCGAATAAACTAGGTAAGAATTTTCACTACACTCAGACTCACAGCT
ATACTTTAATATCTTGAGAAAATATGGTATTGACGAAGTGTGACTTATGG
TCAGATTGTCCAAAATTTACACCCTCCGGGGGAaattatttgatcaaaaa
tTAACTCATATTggaatttcttgaattaatgaTTATGATGAAATATACAC
GCTCGAAAATTGTTAAAACCTTTTTTAATATGATTTATTTTCTATGTCAG
ATGAAATTCTAACTGTTGGTTATGGTGGTCAAGTGAAGCTCTGGTCAAAA
GACTGGCAATTGCTAACATCGTTTCAATCAGACACTAAGAATGTGATCTA
CGGTTCCTGGTCCCCTGATGGAAGCGAATTCTCATTCAGTTCTAAAGGAC
CCAAACAAATGTTGGCTGTTTACAAGAAAGATACTCTCATCGAACAATAT
ACTCAAAACGTCAAGATTACTCCCAAATGGATTTACCAAGCTCCACAGAC
AAGTAAAAAAGAGGTAAAAGGTCGAAAATCCTATGACATGTTCAATGCAT
CTATCCACAAAGATAATCTAGAGATTCTAGCTGCTTACTGCACGAGAGAG
GGTTGTGAGTTATTTCTCATCTCTCAAAGTGGCGATACCATAAAACGCGG
ACCAATTTCGCCTATAGGGGACCCCAAAAACGATATGCAGTGCGTCTCCG
AGATCAATAACGATAGAATCGCTATAGGCGTACAGCATGGGATATTTGGC
TTTTACCACATAGACACTTTGGATTTGTTGACAGTCATCCAAGCTACGGG
ATCACCAAGGATTTGCATGTGGGATAGTGACTTGTTTGTCACCACAGCTT
ATGTGTCTGGAATCATATCCTTTTGGAGTCAAGATGGccaattattgaaa
gaaatTAAGGGTAGGTAATTAAGGATAATTTATTTTCAGACCAAGTCCCA
TTGTAAGAATTATTAAGAATTGTTAATTTTCATTACTGAAACGTTTTCCG
AAAAATCTAGTATTTTGAATTTAGCCCTTGATAAGCATTTGCTTCGTTGA
AAGAAATTCTAGATCGACGTCACTTTAATACTTTGTGCTAAGAAAATATT
GTAGGTCTTTATAGTCTTTCTCGCTGGAAGCCGGGTTTGCGTTACTGAGA
AAGTCTAGCGAAGTTATTTCAGCTTCGTATTGggtttgactgattttttt
cttttttttcatattcatcCTATAGGAGGACCTATTGGATCTATCGTACA
AATGAACAGAGTCGAACAATTTACATATTACATTTGCGGTATCATGTCTC
TACACAAGGTATCTTTCGATTATGAAAATAGTTGCATAGCAAGCATAGAT
GATATTTCTTATTTAACATTGACTGATTGTGGTTTAGATATAAGTAATAC
CGGTCTAGTGGCTTCTGGTGATTTTACTGGGAATATTTATCTATGGCAAA
CACCTTCAAGAAAATCTGTTTGTTCCTTCAATGTTACATATTCAATTCGC
TGTTTGCTTTGGGTTGGCGATTTTCTACTGATTGGTTGTCTCAACTCTGA
AGTAAGTTGTTGGAAATATAATTCAAAGGTCACCCCGGAGAAAGAAGTGA
ACAGTGTTCGGAATCTGTATACTGTTATTGGTGACCCAGTTGCCTTGGCA
ACGAATTCGGATGAATCCAAATTAGCTTTGGGAACTACAGCAGGATATTT
GTATGTTTTcgatttgaagaaaaatgaagaatctttggatattgaagttt
ttcattGTAGCCAGATTCACAAACCCAAGGTGAATAATGATGGCTCCTTC
TTGAACATGGAGATTTGGAATTTGAGATGGAGTATTGACGACCGTTACAT
AGCAACGACTTCTGAAGATCAAACTGCCATCGTTTCAGATTCTTTAACAg
gtaataaaaattttcataaatatcCTTCTCTCTCTGACacttgctttttt
tataagcgtacgaaaaattgaaaacaggcTCGGAGTTTGACACTAAACCC
TTAgtaaatacttttaaaaattattctaaatgCTTGAAAACTTGGATATA
AAACCTTTCTTTGCAAAAATATCTGGTGTATATTTCGCCATTTCACCATA
GGTgaagttttaaaaacattgaCTGGTCACACCACAGCCGTAACTGACCT
CAGTTGGAAACTTTTAGCCTCTGGAAAACACGTTCTTGCAACATGTGCTG
ACGACCGAACAGTCCGCGTANAGTTGGAAACTTTTAGCGTCTGGAAAACA
CGTTCTTGCAACATGTGCTGACGACCGAACGGTCCGCGTGTACGATGGAT
TGACATTTGAACTCATCACTGTTCTTAAAACAGAACTTGTATATGGTTGG
TATACCCTAACTTATAtggaaatcaatgaaaaaaatgatcGATTATTTGT
AACTACGCAAAATGGTTACTTATTGTCATGGGACTTGAATTCTTTTGAAT
TGATTTACTGTGAGAAATTGCATGCTGGATCTATTGAAGGAATCGCACTT
TCGAAGGATGGACAATCTCTGGNTTGAATTGATTTACTGTGAGAAATTGC
ATGCTGGATCTATTGAAGGAATCGCACTTTCGAATGATGGACAATCTCTG
GTAACTCTTGGTTCAGATTGTGTTGTAAACATGCTGGAAACCTTGTAACT
TCCAAGGTATTTATTGCATTGTTTTCCAGGGCTTGTTTTCTGGTTTATTA
TAAAGGGGTCAGTGCTAAACtaaggccggcgtaaaaagggccaatacAAA
GGTATATTCATTTTGTTTGTTGAAAGGAAGCCAGATATACTGTTTCAGTG
GGATCcgaaaatttatataaaaacaaactccTGTTGTGATATAGACGAGT
AAAAGCTACCTCTGTTTACATACTTGataattagaaaaattttcctttta
caTGTGATGTGAAATCTTAGTAACTTTTTGGCAACGTGAAAGGCGGTTTT
CTTAAAAGAAACAGCCAGCGGATCTTCCAaaaatcttattaaaaaaagtg
aacaATCTGAGTATGAAATAATGTATGAAATTTTATATCTAGCGCACTGC
acctttaaaaatttaaattgtttttatatcaATCGTTCGCACATTTCCAT
ACTGTACTACGAATGAACATGCCCAAgatcaaaatacaattttaattaCA
GTTACTATTTGAATCTgcatttattttaattttctctttaaatgttctga
ttttttgtatctccctctgccaactttcaaaaaattataaacactTTCAA
TTTTACTCATTGAAGACAgctgttttttttgtaatgCGAAACTTAACGGT
TGAGTGATTATTTCTAAAGACGCCTCTTCAAATGTAATTCTTTTTcggaa
atgtaaacaaaaatggtagacgccgttcaaaaaaataccaaaccaagaaa
cattacttttttaacttttggaataaataatatctttctgaaaatttact
ttttttatgtttcctggtaaattttattttatttttaaaacttttctttg
agATCAATTGAGGTTTTTTTTGTTGCAATTGATGCAAAGATGAGATTTTT
ACTTTGGTATTTCGTTCTTGTTGTTTTGGTCATCAAACATGATATTAATT
GtaagtattttcaaaattataaaacGTTCTCATTCTACAAGTCATTTTCT
AGATGAATTCTTTGATGCTCCATAGCCGTTCAATGTACTAATAAGCCTTC
TAGTTTTTGTAAATAACTATCGATCGATAACTTTCCttagaccccccccc
ctaatacCGTGCCGCTGCCTCAAGCCCTACCTCGGGGGGGGGGGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTATGCGA
Ttattcatgcatatattatgacgtaaaagagaaaataacaataggagacg
aagtaaggatatgtgacgaagtagtgctatgcacaggggggcgtacgggg
tttgcgatttccgaaataccgaataatttagccaaaatttccgagattcc
gtaaaaaaatacttgcaattccgataccgaatttttcctcgttttgacta
attttccattaaatttgatttttcatgtatgaattccgaaaaagggggat
aaaaactttataataccgaaatttcgaagcaaaaattcatggatttccga
tactgaaagaatttcagaattccgaaataccgaaggaattttccccgatt
tccgaaattccgaagaaaaaagggtcgatttccgcaattccgaaataccg
tacgccccccactacCTCCTAGGGAATTTTTATCCTCCTCTCTTTCCTTA
TCTTGTTACCAATCTTACGATTATTCGGGACTCTCTCTCTCATTAAATTA
TTTAATCAATACTTAATAGGCAAACATCATCGATCAAGACAGTCAAAGAA
ATCAATCATTCCCAAATCACCAAAAATCACTCACCAACAACAATCATCAC
ACTTTTCACATAATCTTCCATGGAAAGAGATCTCTAAAAAATCGTTGATC
GATTCAAATCCTTCAGAGGATACCGAAACAATGCAAAAACAAAAGAGAGG
TATTGTATTTTTTCTCGCTTTATTAATTTTGTATTACCTTTCCTTTCAAT
AGATCTTTATCCGTAGATATTATATTCTTTTGCACACTAAAAAGCCAGTT
TTGAAGTCGACTTTTCTGTCATGTCTGGTCATGTTTGTCTCTTTTTTACC
TTAGATTGTCGAACGTTTGTATATAAACATTCGAATCCCGTAGTTCATCA
ACAGAATAGAATAGAAAGGTAGAATAGTCGGTTCAAAATAAGCTAGAAAC
GATTCCGTTATTTTAAGAAGCCCAGTTCATTAAAGTAGTTGGAGATTAGT
GCTTTTGTCCCTATCTTCAAGTTTTAATCTCTAGCCAAGAGCATTTTTAG
GGAGATTGAAATGCTCAAATATTTGAACTATATTTTCTTTATGTTTCAGG
TTTTCTTGCGAATCTGGCTAATTTACTAAACGATGCTGAGTCAATCTCAT
CTCATAAGGAAACTGAGACAAAAGTACCAAGTATCGATGAGGCTCACGAA
AAGAAGGCTGTCGTAGAAAGCCACGAAGAAACCCCAATATCAAAACCTAA
ACACGAAGAAAATAGCGATAAGAAAGATGTGATCGATCTATCGGCACTTA
AAGACTCTATCAAAGCAGATTCTTCTGATTTTGCACCAATCTTTGCCATG
TATCATGGTAAAGTTGTTGAGCTTGGTAAATTACCAGAAAGCTCTTTTAA
GAAGAGTCATCAAACTTCAGATGTTACTTTGCCAGAACATCATGCGAAAG
ACGTCACAGCTTCAAAACGTGTCTTGGATGAGACGACAAGTCACAAAATG
GACGTCACTCCCGTCAAACGTGAATACCATTCATCGACTCCAGATCAACT
GAAAACTTACCTCAATACCATGGCTGGTGGTTCAGATCAACAGAACAGCA
TTACCAAAGATACAATATCAATACCCAACTTAGAATCTGGAATTAAGGGA
GATTTAATCAACCATGTCAAAGGAGTCGTGTTAGATGATGGTAAAGTCGT
ATCTGTCAGCAATAATCATTTATTTGATAACAATAATGATGTCTCTAAAG
TACAATCAGACCCAGTGCAACAAGATGTCCAACAGAAGTTCATGGTTAAT
AAAGAAGGCAATGTGGAACCATTGGTTAAAGAAAAAGTGGAAACTGCCGA
TGCTGTAACCAGGGATAACTTAGGGAATGGTCAGAAAACTGTGACACTGA
CTGTTGATGTTTTGAAGCAACTATTGAAGAAAACAGGAGATTCAAAAGTT
TCTTTGGCACAATTGCTGAATAAACCAAACGAAGCTGAGCAAAGAAGCAA
TACTCAAGAAGATGAAGACCCAGGTCCGTTATCGTGTTTTGATTTCTAGT
AGAAAACGAAATTAAACATTCTTATTATAAGATACATCATAAGATAACtt
agccaaaatttcgtcccgttGAGAAGAAACATACCCTataattttacccc
cactgcgaaattgactttttattcTCATTTGAAGTTCAATGGAAAAGAAA
ACCCTcgaaaccatccccactgggttttttaaaGCTTGGAATTGTAACAA
TAAAGTTTCTTTCCACATTCGGATTTcggtagaaattttcatcccaactg
tgggaaaaagttccaccagcACTGAGAAAAGGTGTAAAATGTTTTTACAA
TCTCCGTCATGTTTTGGATTTATGAAACGCCCCttatttactcaaaattt
aattGATGTAATCAATGTTTAGCGTTAGCGTTTTTTAATAAATCTTATCA
TTACTTTTCCTTTCAGGCACCATTGAAGATTTTGCTGCTGGTGGATTGAA
AGCACACAACGAATACCGTAGCAAGCATCATGATGACAATGTGATCTGGT
CAGACTCACTAGCTGCGAAAGCACAAAAGCTAGCTGAAGCTTTAGCTGAT
AAAAAATCATTAGAAATTGCCAAAGATCTTGAAAAAGAAGGGATGGGAGA
AAACGTAGCCAAGGTTTGGGCGACTTTTAAAAATGCTGGTGAAGCAGCAA
CTAAAATGTGGTATAGCCAGAGTGAAAACTACCATTTTGATGATCCGCAT
TTAGACGAAAATACAGGGCAATTTGCACAGGTTGTTTGGAAATCAACCAA
AGAACTTGGCATGGGTGTAGCTAAAAGTATTGATGATGTGAACAATAAAT
ATGTTTATGTAACAGCTTTGTATAGTCCTCCAGGAAATATTGAAGCTGTG
TTGAGAGACAATGTTTTACCTACTGGTAATAACACACAAGATGTTTattc
aactttctttaaaaggACTGGTGTTATAAACCATGAGCCTGCTGTTGTTC
GAAGGTCAAGGCTACCAAAGAGTAAGAAAGCGAAAAAGATTGTTGCACCT
TGAAGATTATAAGCTTTGATTTTAAACTATCGACCACATAATCCTTTGAG
AGGGTAAGAAGGAGTACAGAGGGACACTGATTACACTTCTAATCTCTGAA
TTATTCCATGAGGACTTTCACTTATGAACGATAAAATTATTACACATTTG
GAACTCAGAGTACTCTGTGGGAATACTGTTTATTTGCCAAATAAAAGGAA
CACTGATTATATTCCAGTCGTAAATGGAGACTGATTTCTTTGCTTTATTT
GATGGATTAATTGAATTAAACAGATGAACAATTATATGTTTATTATGATT
TGATGTAGCTGTGTTTCAGCTACAAAAACAGTTAAGGATACTCCTAGCCA
TTAACAGTGACTTTGATGTCAATCTATTtatcataaattttcaaaaagac
aaaggaggattaaagaaaaatattgattaaGGATGTTTATTtatacaatc
gaatgttttattTGTGGTAATAATACTACAATTTTAATCACTTAATGTTC
AGGCAGTGAGTCCTAACAGGCAATTTTCTTGTTATGCTATTTTTGTGCAG
TTTCAGCTCATCATAAGTCCAATCAAAAGCTCCAAATCTGGCTAAAATCA
TAGTTTATTTTAAGCATAGCGATATCAGTGAGGTACAAAACATGATCATG
ATTTACTTGAAAATTGCGCTGACTAatattttcctcaaaaaataTGTACT
GactcttccttggaaaatactcAGTGACTGATGCTTTCCTTGGAAAATTA
CGCACAAATGATATTTTGTGACTgatattttccttgaaaaatacgtaGTG
ACCTTTACTTATTATTAAAAATATGCAGTGACTGACATTTTTTCTTGTAG
TGACTAATACTTTCCCTGGAAAATACATAGTGACTTATACTTTCCCTGGA
AAATACGTAGTGAATAATactttctttggaaaatacgTAGTGACCAATAC
TTTCCCTGGAAAATACGTAGTGACTAATACTTTCTCTGGAAAATACGTAG
TGACTAATACTTTCCCTGGAAAATATGTAGTGACTAATACTTTCCCTGGA
AAATACGTAGTGACTAATACTTTCCCTGGAAAATACGTAGTGACCAATAC
TTTCCCTGGAAAATACGTAGTGACTAAgactttctttgaaaaatacgTAG
TGACTAATACTTTCCCTGGAAAATACGTAGTGACTAATACTTTCTCTGGA
AAATATGTAGTGACCAATACTTTCCCTGGAAAGTACGTAGTGACTAATAC
TTTCTCTGGAAAATACGTAGTGNATGCTTTCCTTGGAAAATTACGCACAA
ATGATATTTTGTGACTgatattttccttgaaaaatacgtaGTGACCTTTA
CTTATTATTAAAAATATGCAGTGACTGACATTTTTTCTTGTAGTGACTAA
TACTTTCCCTGGAAAATACATAGTGACTTATACTTTCCCTGGAAAATACG
TAGTGAATAATactttctttggaaaatacgTAGTGACCAATACTTTCCCT
GGAAAATACGTAGTGACTAATACTTTCTCTGGAAAATACGTAGTGACTAA
TACTTTCCCTGGAAAATATGTAGTGACTAATACTTTCCCTGGAAAATACA
TAGTGACTTATACTTTCCCTGGAAAATACGTAGTGAATAATactttcttt
ggaaaatacgTAGTGACCAATACTTTCCCTGGAAAATACGTAGTGACTAA
TACTTTCTCTGGAAAATACGTAGTGACTAATACTTTCCCTGGAAAATATG
TAGTGACTAATACTTTCCCTGGAAAATACATAGTGACTTATACTTTCCCT
GGAAAATACGTAGTGAATAATactttctttggaaaatacgTAGTGACTAA
TACTTTCCCTGGAAAATATGTAGTGACTAATACTTTCCCTGGAAAATACG
TAGTGAATAATactttctttggaaaatacgTAGTGACCAATACTTTCCCT
GGAAAATACGTAGTGACTAATACTTTCTCTGGAAAATACGTAGTGActga
ttttttcttgaaaatacgTAGTGACTTGTACTTTTCTTGAAAGATATGCA
ACActtatattatttaaaaaaatacgcagTGACTGATATTTTCCCTGAAA
AACATTACTACATACTCTTCAAGAACTACGCATTAGTTTTAATTTATTTA
CTGcgtatttttcaagaaaaatatcaGTCACTATATTTAAAAtacgtaaa
aaataaaaaatacgtAATGACggattttttcttgaaaatatgtAAGTGAA
TTGTACTCTCCTTGAAAGATATGCAATACCTCTATTATTTTAGTGACTAG
TACTTTCCTTGGATATGACTACATACTCTTCAAGAACTACATATTAGTTT
TAATTTATTTActgtgtatttttcaaggaagatATCAGTTACtatatttt
ccttgaaaaatacgcaGCGACTGATATTTTACCTGAAAAATATGTAGTga
tattttccttgaaaaatacgcaGTGACCTTTACTTATTAAAAATACGCAG
TGACTgatattttccttgaaaaatacgcaGTGACCTTTACTTATCATTAA
AAATATGCAGTGACTGATATTCTTTCTTGAAAATACGTAGTGAAATGTAC
TTTCCTTGAAAGATATGCTTTGGTTAATATTTTTCTTGATAAATATGCAG
CGACTGATATTATCCGCTAAGATTACGTAgtgattgatatttttcttgaa
attatgcaGTGACTGatattttccttgagaaatacgtAGCGATTGATATT
TTCCTGAGAATTACACAGTGACTGATATTTTCCCTGAAAAATATGCTGTG
ACTGATAGTTTCCCTGAAAAATATGCAgtgactaccttaagggaagaaat
ttttgcgagaagaaattttcgcggaatttaatttcgcgaatcagagtttc
aaaatggcaactttcgcggaatttaatttcgcgaatgagccgatttcaaa
agtttcacggaatttaatttcgcgattaagAAGAAGTTACCAACTTAAAT
TAACTTTTAACCACCACGGAgttatttatatttgtttatatttaataaga
aatacacgttataatgcttaaaaatcaattgtgtccatattttttggtaa
tacctggtcaaaaacaacaaaataaaagaagaagaaaaaaaatcgaattt
cgcggaatttaatttcgcgatttaacaaatttggtgtgtttcgcggaatt
taatttcgcgaattacacccaatttcgcgaaaatttcttccgcaaaaatt
tcttctcgcgaaaatttcttcccttaaggtaatattttccttgaaaaata
cgtaCAGTGActaatatttttcttgaaaatgcgTAGTGAATTGTACTTTC
CTTGAAAGATGTGCATTACTAATATCATATCCTTGACAAATACGCAGTGA
CTGGTactttccttggaaaatacgtaGATACGCAGTGACTGGTactttcc
ttggaaaatacgtaGTAACTGATATTCTTGTACTTTCCTTAAAAGATATG
CAATAATAATattattttccttgaaaaatatgcATTACCTGGCTACTTTC
CTTGGAAGATACACAGTACCagatatttttcttgaaaaatacacAATGAC
TGGTACTTTCCTTGGAAGATAGGCAGTGACttatatttttcttgaaaata
caTAATGACTTGTCTTTTCCTTGAATTATATCTATTACTAAtattatttt
cctttaaaaatacgcAGCGACTGGTACTTTCCTTTCAAAGTTATACCAGT
GACTGATATAttccttgaaaaaaaatatgcaGTGACTGATATATTACTTG
AAAAATatgcagtgactgaaattttcttgaaaaatatacAGTAAGTGACT
GATACTTGCCTTGAAAAATAGGAAGTGACTGATATATTTTCTGTAAATAT
TACGGAGTGGCTGATACTTTCTCTCAAAAATATGATAGTGAGTATGATAC
ATTAAAAAAACCTGAGATCGATAGGCTCAACAGGATGTAATAAAAAGTCT
GTGAATTCTTGTTAAACTGACTACTTATTTTATCGGAATCATTGTTTTGT
AGAGCCAAAATCTGGCAGTCCGCCATACTGCGTCACAAATGAAACTTCTG
GTACATCAGCTTTAATTGGAATTATGCTCACATCAATCACCTGGAAATAT
TAGGTATGTTCAATTATAGATTTATCATATCAATACTAATACTAATGTAT
TTCTCAATATAATCTAGAACTGAGacaaaaaggctgtaacttagCTATCA
CACCCAGTTGTGAATTTTGGCATATCGGAACTCGACCGATTTTACTCTGG
AATTTCGTAAACCTACCGAGTGCACcagaaaagtttctttttttaaaact
aattttctcgaaatctaaaaattctaaaagaaccattcctatttcattgg
aaagaagaaagataaacttaaattttgattggtcatttattaaactcggt
tcattagatcaaaagttatgctcaattgaataaagaatttactttctgaa
agtgctcaaaaacatttaaaatcgatctatcaaattaaacaaaagCATAt
ctacatgatacatcagtattttcgtttaagcattaaaaattataattagc
tttctaaatgaccttttgttatatgaATTAAGGTTGAATTCCGATAGGAA
GAAAATTGGTCGAAAAAGACCagaaaatctggtaaaattcgtaaaaatac
atcaatatatttttttttctatagcaatatatttcgcaggtctattgacc
tctattgacctctatgaaacactATTATAGAGAATTACAGTTCAGGCaca
agggcctctaaaccgttcttgtacaaaaaatctttttaaatttaattttt
cacgAGGGCTTCGTCGTACTCTCCATTTAAAATCTTCATTCGATCTGGCT
TTATTTATCTCGTCTGCTCTCTTTTTCCACTCTTTGATTTATTCCCTCTC
CATTTTCGTCAAGTCGTCGGTGATAACAATATGTgtttcgaggtacatcc
agccttacaaagactttatccagtctagaaccaaagtTCTGaggaaaact
ttgataaaaGTAAAGTCAATACTATGTAAATGAGAAATCCGGGGGAAAAT
TGTAACAGCTTCTGAACCTTAAAAACTAACCTAATTTGATTTCTAGAATT
TTCTTATCTCAATTATACAGTGTGTCCTAAAAAAGCGGGCAAATTTTTAT
GttaagtaaaatcctcaaaactcatcATCTAAAACTGGGCTTTGAATAAT
TGAATTGAACAATTCTTGGATGGATAGGTTTTTGAGATTGAATAATTAAG
CATGCAAGTAATAAAATTTGGCATAGattatgaggattttactttacaca
aaaattcattcgcttttttgggacacactgtatgtCAGGAAAATTTCAAG
GAAGATAAcagggaccccttcccactggaaaagttgcccaaaatttcgtc
ccctgTGGAAAATATATACTCAAATTTTTGTACCTACTgagaataatcaa
ataaaccaatcctcgaagcaaaatattatgctatttttccgatccccact
gaattttctaacatgaaaacaaaagaatggaaagctccagccataaaaaa
tatgagaaaatcaatccccgtcgagtttcagtccgttatttctatcccaa
ctggctgaaaaaatcctaccgggtctgtgggAAGGGAATGTCTAATTACA
ATGAGTATCCGGATGGGTGAATTTTGATTATTTACTTTTGGTTTATAATT
CTGAATATTCTTGGTTAGATTAATATTGATACAATATTTCCCTGAAAAAT
TTTCTTGTTACATTCGTGCAGGTGTTTAAAGGGACGTTTCTATTTGTCCC
CCTTTTTTTATAGGTCATTCGGgaatgttttgataaattttatatttttt
atttttgatataaacCGAAAATTTAACAAACAAGGCGAATGTTTATAGTG
GTTCATTAAAAATAGTCTAGGTTGTGTTTTAATCAATGacttttattcct
atttttccaACCTAATGAAGCTGAATAGTATAAAAAAAGGGAGTTTTTAA
AGGTTTCCAACattcaaacaaatcaaaacaaaccccTTTAATCATGAAAC
AAAATGtggaaatatttaaaacaaggATTCAAACAAAAACGATATAAATA
TCAACAAAAGTAAGTTAAGCCCTTTGattgaattttcaaatcaatcagca
aaaataaaataaatgtaGCTTTTGTATAAACTGgctttgatttttgataa
atcAGTAAAAAAAGGCTCTCGCTCTTTTCTAGCGGCAAAggaatattctc
tttctaatctTATTATCTTAGATAAACCAACTTATTAAAGTCCTTCAATA
CGATCAAACCCAATTTTCGACAGCCTTTTTTGTAACTGATTTTTAGTTCA
CCCTTTTTTTTTAGCTGAAGCCATTTGGTCAAGTTGGGACGTTAACATGT
GATTACCGGAGTGGCCGATACCCGAATCAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032659XLOC_032659Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051550-exon-scaffold_202-1491911889:1048322..1048538TCONS_00051550-exon-scaffold_202-1491911889:1048322..1048538Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1510915933:1048322..1048538TCONS_00051550-exon-scaffold_202-1510915933:1048322..1048538Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1575043694:1048322..1048538TCONS_00051550-exon-scaffold_202-1575043694:1048322..1048538Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1491911889:1048772..1049431TCONS_00051550-exon-scaffold_202-1491911889:1048772..1049431Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1510915933:1048772..1049431TCONS_00051550-exon-scaffold_202-1510915933:1048772..1049431Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1575043694:1048772..1049431TCONS_00051550-exon-scaffold_202-1575043694:1048772..1049431Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1491911889:1049747..1050421TCONS_00051550-exon-scaffold_202-1491911889:1049747..1050421Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1510915933:1049747..1050421TCONS_00051550-exon-scaffold_202-1510915933:1049747..1050421Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1575043694:1049747..1050421TCONS_00051550-exon-scaffold_202-1575043694:1049747..1050421Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1491911889:1050623..1050713TCONS_00051550-exon-scaffold_202-1491911889:1050623..1050713Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1510915933:1050623..1050713TCONS_00051550-exon-scaffold_202-1510915933:1050623..1050713Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1575043694:1050623..1050713TCONS_00051550-exon-scaffold_202-1575043694:1050623..1050713Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1491911889:1050784..1051177TCONS_00051550-exon-scaffold_202-1491911889:1050784..1051177Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1510915933:1050784..1051177TCONS_00051550-exon-scaffold_202-1510915933:1050784..1051177Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1575043694:1050784..1051177TCONS_00051550-exon-scaffold_202-1575043694:1050784..1051177Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1491911889:1061836..1061903TCONS_00051550-exon-scaffold_202-1491911889:1061836..1061903Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1510915933:1061836..1061903TCONS_00051550-exon-scaffold_202-1510915933:1061836..1061903Clytia hemisphaericaexon
TCONS_00051550-exon-scaffold_202-1575043694:1061836..1061903TCONS_00051550-exon-scaffold_202-1575043694:1061836..1061903Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1048322..1061903 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.048	13.4048	7.15235	7.06525	5.6385	3.28874	6.24365	7.26137	3.68624	3.96305	4.41094	3.1923	4.82198	3.95364	3.03532	5.09924	2.83053	4.61677	3.6729	5.57011	3.61937	4.50264	7.31108	8.08409	6.7244	8.57724	2.61456	0.919504	6.61977	6.82137
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051550 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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