TCONS_00051572 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051572
Unique NameTCONS_00051572
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3327

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051572 ID=TCONS_00051572|Name=TCONS_00051572|organism=Clytia hemisphaerica|type=transcript|length=3327bp
GGAATATAGAAAAAGAAATAtcgaaaaactgattttttggaactttttag
ATGTTTATGACATGACCAAATGATCAATCAATTAAGAAGTGATATGGTAT
ACCCTGGTGCACGAAACAAAAACGCCATGAATAACGTCGGAGCGGAATTT
ATTTTACATCAATGCTCCTCGGAAGTCAAACTCAATGGATGGCTAAAGAA
AGAATGCGACATTAAAATCAGGAAAGAATtttcggAGAAGCTAGGCATCA
TTTACAAGCACTACCTTTATATGTATGATAACGAAAAGGATAGATCAGCA
ACACACGTCTATGACATCACTCAAACGAAAGTGGAGTACATCAAAGGCAG
CTCACAATGGGGATTCATCATCGAACTTTTAGGCCAAGAGAGAAtcagaa
acaaaaaagaaacggTGAAATTTCTGGTCAGTTCAGAAGCTGAAATGAAT
AATTGGGTCAACGAGATCAACACCATTCAGAAGAAAAGCATTGATACATC
ACCCCGATCGCCAAATGAACCACGTTACGTACCTTCATCGCGTAAAGGAA
TGCCGTTACCGCCGACGCCAGACCAAGaacaaaaacctttaaaacatgAC
TATACCGAAATAAACAGTGTTAGTCATCCAACAGAACAAGGAGATGATGT
TTATAACGTACCTAGAGAATGCGGTGCCCCAATAGTGCCAAATGAAACCA
TAATTGAAGATGATCCATATTCACCTATCACAGAATGTCAGAGTAATGTT
TCAGACACTTCTAATACTAAACCACCACCAGTTCCAAGACATAATATTGC
AATGACCGGGTCACGTGATATTAATGAAAATGAGGCTGGCTTTGGTAATT
ACCAATATCCATCAACACATTATCAGGTACCGAAAAGTAATAGACCGTCA
AACCTTGATATAAATGTTAAAAGCACTGATGCAAACTATCAGCGTCCATC
TAACAGACCAATACCAGCTACACGAAAATCAAAAGTTGAACAAATTCTAG
GAACAAGTCCAGGATATGAATGTCCTTCAAACAGTCATTATGTGGCTCCA
AATAGATTAATACGCCAAAATGGAGCCAATCAACGAGTCCTTCCTCTTAC
ACCTGATGGGCGTGACACAACAGATAACCAAGAACCTCATGAAAACCCAT
ACAAAGTACCATTAAGAGTAAGCACATCTGTTGGACTACCTAATGCTTTA
CCACAGGAAGGACCTAAACCAGCGAAATCACATACGCTACCTTTGGGTAT
AACTCGGCCAACACCGGCTACAAGATTACCGAACCCTAATAAACGTTTAT
CATTACAAGTTGCGAGTTTAGCTGGAGCAACAAATTTGATGCTTTCCTGC
TCGGTCAAAGatgacATGGCTGTGAGAGACAACCCAAGGTCATCAGACGA
TGATAATGAGGAATATCTCGATTTCACGACCGTTCCAAGTGACGAAGAAA
CACCTTACACGACCATAGGTAGTAGACAACGCCCTCATCAGTATACTAAG
TTAAGAAGCAACACCTACAATGAACAATGTATTTCCGAAGATTCGGGCGA
TTATATCGTCATGATGAACCAGGAGAGAACTGTGGAACCTACTACAGTCG
ATACTGAAGAGACATATATCGATATGGCAAGAGGGGAGTTGGTAACGAAT
CAGACGGGTGAAACTGaagaagaacaattttatacatGCATGGACAATGC
GGGAAATAATGATATAGtATTCAACGCGAATGAAGAGCTTTATGACAATA
TCAAATTTACTGATCCTATTTTGAAGGATATCAAGACAGAACAAGACAAA
AAGCTGTTACCTCTTTCCACCTTCCAATTTCATCTCGATAAAGACCAATG
TGCAAGGTTGCTACGGGATGATGGTAGCCCAGGAGTTTACCTTATCAGAA
AGGGAAGTCAAGGGCTAAACGTCTTGATGGCTTCACTTCTTGGAGATATA
AAAAATTACAGAATCTTCATGAGTCAGaacaaactatatttGAAAGATGA
TGAACCGTTCTTTGAACGCTTACCTGATCTCATAGCTCATTACACCGAGT
ATCATTTACCGACATGTCACGCGCGACTGGAAAAACCATACGGAGAATGA
TTGTTGATAGGTTATTTTATTCCAATTATTCATGATGATTGTTATTTTGA
GCTGGAGATGTACAAAAGATTGGTGTTTATTGGTTACGAACAGAATAAAA
AGTATCCTATTTGAAGCGGTGAAAGGCAAGGATAACCAGGAGATGCCTAT
ATTTGGAACAATAATACCTAGTCGAAAAGCTTTTACaataaattgaacaa
atttttgttttcttgatttttatcgaaCAATAATACCGCTGTGAACAAAG
TTATTCcgatttgagaaaaaagagtttTATCTGGCAAGAGAATAATGGCA
AACCAAAATTCACATTCGGCTGAAAATTAATGGCCCTGGTGTACAAAAAA
GCAATAAAGTATAAGACAATTTCGCCTGCATTATCGATGTCCAAGGTTTT
TACTCAcatattttaaaaaaagtgttcaAGATTTTCTTACCATAATTTTT
CGGATTGAAATTTGTGACCATTTGTTGATCGATAGCGAATCtcattgatt
ggttgatattatTGATTTCATTATTGTAAATTATTATCTAGTTTTTTAGT
ATCTAAGAGAAAATTATGACATTTTCCATTAACAGTGTGTCCAGAAAAAG
CGGCACAACCTTGATATAAACTAGAACCCCCGTGGCTTCTTGTTGATagt
aacacccctgtgtcacagacccacttggaccccagccccactagaaaatt
tgacaaaaatttcgtccccggtggaaaaataccccGGAATataccccact
gggaaattgactttgatttcattcgcGTTCGAAATTCAGTGTTTAAAAAA
TTGTACTCTAAAACCACCCCCACCGGGTTTTttaaaccttggaacaatag
aatttctatcccccattgagatttcaacaggaatttttatccccactatg
aggaaaaaagttccaccggggctgcgagacaggggtgtatagtaATCATg
acaaactcgaacccagtcctttGGCtggcttttttatgattctgtgaTAG
GATTGTATTATGTTTATCAGTGAAATCAAAAAAAGGTGCAATGGATCTGG
GTAAGAGTGTCTATAGAATTAAATTTCCAAAGTTAATTATTTTctattca
aaaatttgaattgagtaGTAACATTGAGTTGTGTGAGTTTTCCTGGACAC
ACTGTATATCTCATTTATCGATGTAAATATCACTACAGGACGTTTTATTT
CcaataaagaaattttctaTTCTAATT
Run BLAST on NCBI

transcript from alignment at scaffold_202:1146754..1158256+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051572 ID=TCONS_00051572|Name=TCONS_00051572|organism=Clytia hemisphaerica|type=transcript|length=11503bp|location=Sequence derived from alignment at scaffold_202:1146754..1158256+ (Clytia hemisphaerica)
GGAATATAGAAAAAGAAATAtcgaaaaactgattttttggaactttttag ATGTTTATGACATGACCAAATGATCAATCAATTAAGAAGTGATATGGTAT ACCCTGGTGCACGAAACAAAAACGCCATGAATAACGTCGGAGCGGAATTT ATTTTACATCAATGCTCCTCGGAAGTCAAACTCAATGGATGGCTAAAGAA AGAATGCGACATTAAAATCAGGAAAGAATGTAAGTGATAGGTATATCTAA GTcaaagaaaaattcgaaaatcgaaTATTGACGTTTTTGATCCCTCAAGT GATGTGGAACTACTGTGATGTTAGATGATGACCCCTTAAGGAGGGTAGTT TTTGGTTTCAGGAAGGTTTCTGCAACCATTAGAGAGATTTTCGAGCTGCG ATAAAGTGCAACTCACAACCGGAACATTCATAAAATGTGAgctggacgtt gaaacaacgttgtgtgaaTCTTCAAGTGtgactttgaatttgaaatgtaa tctagTCGATTTCAGTTAACCAATAGTCATATATCTATAAAGCTTTTGTC ACTAAGCTTCATCCAAACCTTGAAGAAAGTTTCTCAATCCTAGCTGCAAC CCCTCGACTCCTTCTTTGTAGCTATCACTTTCACCTGCTTTCACACATTC AAGTGGCCCAAAATCCAGGGGAAAAAGCGCCGAAGGAAAGCAACCTACCG TGGCTGTGGCTGGGAAGTTTTTTAGACTTCCTAAAGTGCATTTTAGGGGT TGAAATGTAAAAACTGTAAGGGTTTAAAAGTGAGaagatcgaagtttttt tgggctaaatttcggaaaatctgaccatttaTTGCCTTGAAGTGGACAAA AGAATCAAGAGAAAGCAGCGTAAGGATCAGTTTTTCGACCAAATTTACTC TTGGccatttttttctgcactgtaagggttcaaGGGGGGTTCAAGTTTGA AATCCTAATTTTTATTGGCATTTACACTAGTTTTTagaccgacccccccc cccccccttggcctaAATCAATTTTCATGGTACGGTAAAAATTGACAATA TGTTTCCTATTATCTTCTGAAAGGGGGATATAGTAAACATTCTTTAGAAC TTCGTTCAAACAAGATTTCCCTAAGTAATCAATCTTACACGACTCTCAGC AATAAAGTAACCTGAGACACCATTAAGGAACAAACGAAATAAGAGATGAT GCTTGCTTAAACATGATGCTCAATTATTGCGCAAGTTTTGTAATAGTTTT GTCgctttatatttttcataagaTACGTCACGATAAtagaaaacaaaaca caaagGTTGAACAAAAGTTGGCACACGATTACTGCTCAAGTTCCAACGCG CGCTTTTTTTATGCAATGGCAAATTTCTAAAGATTTCAGGAAAGTCCGAC AACATTCTGGCCTTCGAAACAACTTTAGGGGTAATTCTTCCAAAGTTAAT TGATATACAAAGTTAGCGAAGCTTGTCCATGCGTCACTTTTCGGTACCTT ATCGAGGAAATAGTCACAGATAAGCGACTGATTTTATAAACTGTATTGTA ACTAAAATTTTCCCTAATCGAAACCCCAGAATTGTGAAAAACATTTATCT AAAACTTTTGACTGTGGTGAAATCTTTTACTAAAACTTTTGAATCATGTG AAATTTGTGACAAAAACTTTTGTCTTAAAGGAAATTTgtgacaaaaaact tttttagagaaatttgTGACTATAATTATGATCCCGATAATAAGGTAGTT TATGAAACTAATCAAAAGGACGTACACCAAATTACAtttaagaaaaagga aaattacaAGCATACCTGACAAGTTGTGCAATCTTTCAAATACACCGCAA TCGAAGGGATCACACCAGACCatttcttaaaaagaaaagaaattcatcAC AATACACATAAGTTTCTATCATGGCATacctttaaaaatttgtttcgCCC AGGCTCAGCTCATGTCGAATAGAGAGATGAACTTGCTGGGATTGGACTTA TAAAGCGCTAAAATTCATAAGCTTCTCTGATTTTATATCAGATTTCTGCC GTATTTTTGTGTTTTAGCTGACATAATCAGCATTTGTAAAACATCCTTTC AGCCAACCTTCCAACTGTCAGGAACTATTGTAAATGTTGGCCGATTATGA CCTAACCTGATGACCATCATAACCcaatttgctaaaatttctgACTGTTG GATGTTCACAAAACACACAAGAGCGTTaccacacccctgtctcacagccc ggtggaactttttatctcagtggggataaaaattcctattgaaatcccat cAATGGGGATTCCTTTGTTCCgaggtaaaaaaattcagtgacaatggttt tgaagtgcaatttttaaacattgaattttgaatggggatgaaataaaatt taagtgggctgaaattctaaggtattttctcaccggggacgaaatttttg tgtGTAACTTGTAAGTTTAAtcattctttgtttttttgtttttttcagtt tcggAGAAGCTAGGCATCATTTACAAGCACTACCTTTATATGTATGATAA CGAAAAGGATAGATCAGCAACACACGTCTATGACATCACTCAAACGAAGT AAGTAGCTTATTGGTACAATTGGTAACAGGAAAAAAAGTGAAGGCATGAA ATTTTCACTCAATTTGTAACAGGAAAAAAGTTTGtaggaaagaaattttc actCAAAAGGCAGTTTTTTTTGTCTCCAAGTATTGGTGATAAGGTAACTT TTGGTATCAAAAACTGAAGATCGATTAATTTTCGGTACACGCTGCCATAC TTCTTTGTGACGATTTTGAAGTTTGTAAGATGGATGACATAGCTGGTAAG TCAACACAAAGTTAAGGAGAAATAGCAAATTCTTTAGCCTTTTCAGAGGG TTCCCAGTGGAGTCCCTTATCAAGCCCTCAGGCGAAAATGAAATTCTAAT CACAGAATCACGCTGGAAATATTCTCCCACCACGAACTCacacaaaccgc tgggggcGGGGGTATTTTACCACTGAATAAACTATTCTGTAACCGATTAC TGGTATTATACTTTATTCTAGAGTGGAGTACATCAAAGGCAGCTCACAAT GGGGATTCATCATCGAACTTTTAGGCCAAGAGAGAAtcagaaacaaaaaa gaaacggTGAAATTTCTGGTCAGTTCAGAAGCTGAAATGAATGTAAGGTT ATAACTGGATTTACTACTAATAAAACAGTGGAATAGTTTCTTTAAAAACA GCCGACTCGTTTTCAGCTTAAGAATTTATAGAGAATCTTAGTGTAGcccc agtttgcagagtatggcaaAGCTGCATTCTCAAGAAAAAATTCGGAAATA CCAAGTTCCGCACTAGAAGAGCGCATCTGATAAAATTGGTCCGGAAAATG TGTACTAATACCTcggaaattggcccaaaaaggcaaaaaattgctaaaat taacTGCACTTGTGGAGAAAATAGCGGAACTCTGCACTTGGGGTTGGGAT TAAAAAACCGTCTGCACTTGCACCTCAAAATTTGCACCTGCACTCGACTT TTTCCGAGTTGTGCACTCGAGATCTCGAGCAAACGTGccacactctgcaa actgggAGCCTGGAAGAGAAAAATGATTGAAAGTGTCACTATAATTGATG CATGTCTTTCTATATAATGTGATAATATAGACAAAATATACGAGGGATTC AAAGAAGACAATATGTACGTGTGGCAGCGCCTGCGAATTTTTAAAGCTGT ATTATTATAAGTCGACTCTAAGTAGGATCTAGCCAGCCATATTACATTAC AATCGTTATAGATCAATTTACAAATTCCGATGCCGACTTTCTCGCTTCAT TAGAATTCTCTAtatgattttcaaacaaaaaaaccATTGCTTCTTTATAT TATAGAATTGGGTCAACGAGATCAACACCATTCAGAAGAAAAGCATTGAT ACATCACCCCGATCGCCAAATGAACCACGTTACGTACCTTCATCGCGTAA AGGAATGCCGTTACCGCCGACGCCAGACCAAGaacaaaaacctttaaaac atgACTATACCGAAATAAACAGTGTTAGTCATCCAACAGAACAAGGAGAT GATGTTTATAACGTACCTAGAGAATGCGGTGCCCCAATAGTGCCAAATGA AACCATAATTGAAGATGATCCATATTCACCTATCACAGAATGTCAGAGTA ATGTTTCAGACACTTCTAATACTAAACCACCACCAGTTCCAAGACATAAT ATTGCAATGACCGGGTCACGTGATATTAATGAAAATGAGGCTGGCTTTGG TAATTACCAATATCCATCAACACATTATCAGGTACCGAAAAGTAATAGAC CGTCAAACCTTGATATAAATGTTAAAAGCACTGATGCAAACTATCAGCGT CCATCTAACAGACCAATACCAGCTACACGAAAATCAAAAGTTGAACAAAT TCTAGGAACAAGTCCAGGATATGAATGTCCTTCAAACAGTCATTATGTGG CTCCAAATAGATTAATACGCCAAAATGGAGCCAATCAACGAGTCCTTCCT CTTACACCTGATGGGCGTGACACAACAGATAACCAAGAACCTCATGAAAA CCCATACAAAGTACCATTAAGAGTAAGCACATCTGTTGGACTACCTAATG CTTTACCACAGGAAGGACCTAAACCAGCGAAATCACATACGCTACCTTTG GGTATAACTCGGCCAACACCGGCTACAAGATTACCGAACCCTAATAAACG TTTATCATTACAAGTTGCGAGTTTAGCTGGAGCAACAAATTTGATGCTTT CCTGCTCGGTCAAAGGTATAACTTGAGTTTgctttttttatacaaaaaca acTGAAATCTGTAATAAAAAGTTTGTAGAAAATAATTTCACAGCATCCAA AAATActttaagtaaataaaaaaaaaactttgggaatatcttttcaaatt cGACTAACTTTTTAAAGTAGCATAGAATTGGTGCTTAGAACtttaataat aaaatattttcagatgacATGGCTGTGAGAGACAACCCAAGGTCATCAGA CGATGATAATGAGGAATATCTCGATTTCACGACCGTTCCAAGTGACGAAG AAACACCTTACACGACCATAGGTAGTAGACAACGCCCTCATCAGTATACT AAGTTAAGAAGCAACACCTACAATGAACAGTAAGAATGTTTGTTTTGGCA TGATTAGAATTTAATACACGCTATTTTTCTTAATGAACAAAGTATTATAA TAGTCTCAAAATTggaatacacaggttgcaaaaatAAAGATTGAAGTTAA Ataacgcttttactcgaaatttttatgtgcttgttacatgacatttattt ctgattggttcgaatttattaaTACTAATAAAGTTTTTGAGTTGTAAACC AAGTAACATGGggataaaatcacgtgaactttctcgagtaatcacatgtt ttgactgcactgcTATAATTGTGCAACCCGTGTGTTGGAGCATTAGAGTG AAGACTAAATTAGGGTGCGAAAGCGACCTTTACGACGTtgtatttcttga aaaattttcgTCCGTTTTAAGGCGCGAAATCctacgattttcaaaaaatt tcgctttTTTCAAACtcacagtgcactttgggaagcctgAAATTTATTCG TAATGGTCGTACATGCTAGGTCACCCACCTTAAGTGCACCCAGGGGTTTA AATAGAACAAACTCAACCAATCCATGAACGTCTTGTCTCAGCATCTCTAA TAAATCAATTaaccgcccccccccccccgaatgtgattttttgttgaatt ttcttcaaatgaacACACAGAGAAACTTCAAATGAAACTTAATATACCTA TCAACTCTTGCGCCAAGAACTGTAATGATGGGTATAGGGTTTGAATTAAC TAGGGACGAATGACGTCAAAAATTCCGAATCTATTGTACTTACTCATATA ATCACAAATAAAGAAGTTTGAGAGTCTGGAAACTCAGACCATGTTCAGAt gttacggttccgtttcgctccgagaAGAAATGGTTCCGAAACAAGTTTGA ACGTCAAAATTGGAGccatcaaaaaagaagacgttacacagcaaaacaga tcgaaacagtttcgcttcactattttcatcggagcGGAACTGCTCCTTTT GCTTGCCAAAATGTTTGAAGTCGTTGCTTCNCGGAACTGCTCCTTTtgct tgctccgaaacgttccgaaactaatatgaacactctcgattCGTAACGAA AACCAGACCGGAGCGAATAAaaggaaccgtaacgtctgaacatggatTCA AATCCAATCTTATTGTGACGTCAAGTGCTTACTTTACACCTATCAAGCGC GAGAAAACTGGGCCCAAGTTTACAAAGAAAGAATGAGGCCAAAATGTTTG AAGTCGTTGCTTTGATTTTCccattttgacgtcattccttTCTGGTAAAC TCGAACACAGTCCCCTTCatgctttaaaggttttgtcttTACAtgagagt gatatcgtttgcttactcatcaatcttacttcacaagctttttcacattg aattgacacagatgtggagcaagattggtcagaaagaggaaaagaaaaac agtttatatcagcataatataacaataggcagacactgtcctgatatgaa acggtaacacttatgtaaaaaggaAACCTTCCTTTAAGGGTTGATAGGAG TATCATCAATATATTACTTTGTCTTTGTACAGATGTATTTCCGAAGATTC GGGCGATTATATCGTCATGATGAACCAGGAGAGAACTGTGGAACCTACTA CAGTCGATACTGAAGAGACATATATCGATATGGCAAGAGGGGAGTTGGTA ACGAATCAGACGGGTGAAACTGaagaagaacaattttatacatGCATGGA CAATGCGGGAAATAATGATATAGtgtaagaaaatttaaaattatcagCTT TACGAAGACgaagacttcttttttttttacatcaagctacacgttttatt tataagcacatccaaaaattttgaaacattcggatgttctaaacttttcg aatttaagcctaaaaatattcttaacatattcttattttcaccatttttg tccattttttcctcagaaatcgggtgtttcagagtttacaaagccttaaa atgttcttaacttgttctttagtactttggccatcgaagccttatattct tatatagtttgttcttataaaaaaacgtgtaaacgtGAAAACATCTTGAC ATCATTTTTGCCATGATGGACTCAAACCCAATCCTATGATTTCATGCGCA TTTTTTCCATGGATGAAGATAAGTTTCACTTAAAGCTCTGTGTGGGGATA CCGAAACAATATTCGGAATGATGAAagcaaaaataagaaattatgtgGTT ACTATTTggttctacacgttttttatataatagCAAAAGGCTTCGAAATC AAAGATATAAAAACATTATtataacatttaaaggctttgtaATCTTCAAA ACTTGCAAAATTAGACCAAAATATACTCATACAAGCTTTAGAATAAGAAC AACTAAGAAAACATATTTAGGCTTACAAATTTAAGAaatatctgaaggct tcaaaaatctttttttataaatgtatATGCTTTCATTAGATTCAACGCGA ATGAAGAGCTTTATGACAATATCAAATTTACTGATCCTATTTTGAAGGTA AGGAAAACAATTTGGTGAAATGAAATTGTGCCACCATACCGaaaattttc cctattttcgacCAGATTCTTTCGTTTTCCTACTGTTTTTAGCCggattt tcgattttctttcGCGTGGCTGAAATATTTATACCTTCAAGATaaagaaa ccaaaattttcgaattgttcgattatttctaatttattgatttttaaatg ACAGACGTTTGAGAATTTGGCTGTAGAAACTACAAATATAATAGTGTTCT TCATTTTCAACAGGATATCAAGACAGAACAAGACAAAAAGCTGTTACCTC TTTCCACCTTCCAATTTCATCTCGATAAAGACCAATGTGCAAGGTAAAAA GGTTTAGGGTTTAGGTTTAGGTTTGGACACGAGAATCCGACGAGAATCCG GGAGAAACTTTGGAAAAATATGTACTAGGTAccttaatgggataaaattt cgcggggacttaatttcacgggtggcactattgggtggaaatattttcac gatttttcgaCTTAATTTGTGGGGACTTAATTGTCTTTTAATAGTGTCAT CTGCAATATGACTTCGCGGATAGGcccattttcattatttcctatcatta tttgcgcctctttgatgcaagcaaccattcaaatagtattaatttgacat attttgagttttgcttagaaatatttcgcggatgaggccctccCAAATTT CCATTgtgacttaatttcgcggattttcgtggatgacacccaaatccgcg aaatttaatccccgcgaaagtttatcccattaaaggcGAAAGCGTAAACG GTTCCTTTTTCACACCTTGAAAATTATTCCgagaattacaaaaaaataac aaaaatggtCGTAGTTTTCGGGAATTTTAGACCGAAATCTGTTGCAAATA GAAGAATTATTGGGAATAAATTAATCAAAGCTTTATAAAAGATGGGATTT ACGTCTTTTGCAGCAAACCTAGACGATGCTATTGTCCGTATACTATAATA TATTAtcatgatataacatagtttgtatattataaaacgtaatatgttgc gcGGCGGAAAAAAGAGTGTGTTCAAGACAACAGCTACCCCCGAAAAAAAC TCCCGTCTTCACGtatgttcctcttagatgaaactcgttatagactatag catagtctatagCAAACCTAGTGACAAATGGGAGATAATTTAATTAGTGT AATTGAAGCACAatcaaaatgtaaaatcaattaGGATTCGATTTCgtttg ttttcacggggtcaaCGGTCATCCTAATTTGCTATCTATGAACACTGAAC GAAATATTGGAAGGAGCCAGGATTCGAAACGGGAACCCCAGGATTATGCC GTTGACACCTTTGACCACTGGACCATTGCTCCTGACAGTATAATTTCCTA TAGAAAAATTAgtgattttattttatgaaacCCGCCTTTCAGTGACCTGT AGAATAAGAACTAAaggaaatgaaaacatttttatacCTGTGATTTTTTA ACAATTCAGTTCTTCGGATGACTTTCAATCTGATGTTATTGTCTCTGAGA TCAATCAATACCTAAAGCTTTGAAATAaatgtttattaaaatttctttcc aaTCAGGTTGCTACGGGATGATGGTAGCCCAGGAGTTTACCTTATCAGAA AGGGAAGTCAAGGGGTAAGCATTTTTTCAGTTGTGGTGTTTCCGATTTTA GAATCCgatctttgtgttttacagtctTAAACTTTAATAAAAAGAGATGA GATAGATATTCAAACAAGAAGAGTCATCGAGAACAAGAATTAAattaatt tattgatttttaatttagaaataaatcaataatcTTTAACAAGGGTAAGC TAAAACAAATTCAGCTAGATTCTTTAAGGCCATCGAATTAATTTCTCTAC CAATTTTTAGACTGGTTCCGTAGTCCTCTAAGAATATTATTGAAATCATT CATGTGAATTCTTTAGGCTTTATTAAActttaaatttctattttttttta cagCTAAACGTCTTGATGGCTTCACTTCTTGGAGATATAAAAAATTACAG AATCTTCATGAGTCAGGTATGGTGATGATTAGAGGTTTTtagaacaagct atataagaacatgagacTTCGATGGCGAAAATTTTTTAGATCaaactaag aacattttaaggcttcgaaTCTTAAACACCTTTTGAAAGTTAACTATTTC CCACCGAAAGGTTTGACCTGCGTGATTTTTCACACAAATGCCAGATAAAG AGTAAAATCCATcgtcagatttcgaaaaatatgccgcACCATGCAAACAA GGATTATAAAAGGACAGAAACCTTAAGGTTTTTTCTATTGCTTAAAAAGG TTTAAGCTTCCTCCTTAGCCCTTcgagctttaaactcaatggcccTTACA TTAGATAAAGCTGTGATATAAACCAAAGtcgattcttttttttctatctc tagaacaaactatatttGAAAGATGATGAACCGTTCTTTGAACGCTTACC TGATCTCATAGCTCATTACACCGAGTATCATTTACCGACATGTCACGCGC GACTGGAAAAACCATACGGAGAATGATTGTTGATAGGTTATTTTATTCCA ATTATTCATGATGATTGTTATTTTGAGCTGGAGATGTACAAAAGATTGGT GTTTATTGGTTACGAACAGAATAAAAAGTATCCTATTTGAAGCGGTGAAA GGCAAGGATAACCAGGAGATGCCTATATTTGGAACAATAATACCTAGTCG AAAAGCTTTTACaataaattgaacaaatttttgttttcttgatttttatc gaaCAATAATACCGCTGTGAACAAAGTTATTCcgatttgagaaaaaagag tttTATCTGGCAAGAGAATAATGGCAAACCAAAATTCACATTCGGCTGAA AATTAATGGCCCTGGTGTACAAAAAAGCAATAAAGTATAAGACAATTTCG CCTGCATTATCGATGTCCAAGGTTTTTACTCAcatattttaaaaaaagtg ttcaAGATTTTCTTACCATAATTTTTCGGATTGAAATTTGTGACCATTTG TTGATCGATAGCGAATCtcattgattggttgatattatTGATTTCATTAT TGTAAATTATTATCTAGTTTTTTAGTATCTAAGAGAAAATTATGACATTT TCCATTAACAGTGTGTCCAGAAAAAGCGGCACAACCTTGATATAAACTAG AACCCCCGTGGCTTCTTGTTGATagtaacacccctgtgtcacagacccac ttggaccccagccccactagaaaatttgacaaaaatttcgtccccggtgg aaaaataccccGGAATataccccactgggaaattgactttgatttcattc gcGTTCGAAATTCAGTGTTTAAAAAATTGTACTCTAAAACCACCCCCACC GGGTTTTttaaaccttggaacaatagaatttctatcccccattgagattt caacaggaatttttatccccactatgaggaaaaaagttccaccggggctg cgagacaggggtgtatagtaATCATgacaaactcgaacccagtcctttGG CtggcttttttatgattctgtgaTAGGATTGTATTATGTTTATCAGTGAA ATCAAAAAAAGGTGCAATGGATCTGGGTAAGAGTGTCTATAGAATTAAAT TTCCAAAGTTAATTATTTTctattcaaaaatttgaattgagtaGTAACAT TGAGTTGTGTGAGTTTTCCTGGACACACTGTATATCTCATTTATCGATGT AAATATCACTACAGGACGTTTTATTTCcaataaagaaattttctaTTCTA ATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032666XLOC_032666Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051572-exon-scaffold_202-1491911889:1146754..1146982TCONS_00051572-exon-scaffold_202-1491911889:1146754..1146982Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1146754..1146982TCONS_00051572-exon-scaffold_202-1510915933:1146754..1146982Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1146754..1146982TCONS_00051572-exon-scaffold_202-1575043694:1146754..1146982Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1149252..1149351TCONS_00051572-exon-scaffold_202-1491911889:1149252..1149351Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1149252..1149351TCONS_00051572-exon-scaffold_202-1510915933:1149252..1149351Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1149252..1149351TCONS_00051572-exon-scaffold_202-1575043694:1149252..1149351Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1149825..1149945TCONS_00051572-exon-scaffold_202-1491911889:1149825..1149945Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1149825..1149945TCONS_00051572-exon-scaffold_202-1510915933:1149825..1149945Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1149825..1149945TCONS_00051572-exon-scaffold_202-1575043694:1149825..1149945Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1150659..1151568TCONS_00051572-exon-scaffold_202-1491911889:1150659..1151568Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1150659..1151568TCONS_00051572-exon-scaffold_202-1510915933:1150659..1151568Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1150659..1151568TCONS_00051572-exon-scaffold_202-1575043694:1150659..1151568Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1151767..1151932TCONS_00051572-exon-scaffold_202-1491911889:1151767..1151932Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1151767..1151932TCONS_00051572-exon-scaffold_202-1510915933:1151767..1151932Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1151767..1151932TCONS_00051572-exon-scaffold_202-1575043694:1151767..1151932Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1153486..1153677TCONS_00051572-exon-scaffold_202-1491911889:1153486..1153677Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1153486..1153677TCONS_00051572-exon-scaffold_202-1510915933:1153486..1153677Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1153486..1153677TCONS_00051572-exon-scaffold_202-1575043694:1153486..1153677Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1154393..1154450TCONS_00051572-exon-scaffold_202-1491911889:1154393..1154450Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1154393..1154450TCONS_00051572-exon-scaffold_202-1510915933:1154393..1154450Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1154393..1154450TCONS_00051572-exon-scaffold_202-1575043694:1154393..1154450Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1154717..1154796TCONS_00051572-exon-scaffold_202-1491911889:1154717..1154796Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1154717..1154796TCONS_00051572-exon-scaffold_202-1510915933:1154717..1154796Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1154717..1154796TCONS_00051572-exon-scaffold_202-1575043694:1154717..1154796Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1156060..1156117TCONS_00051572-exon-scaffold_202-1491911889:1156060..1156117Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1156060..1156117TCONS_00051572-exon-scaffold_202-1510915933:1156060..1156117Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1156060..1156117TCONS_00051572-exon-scaffold_202-1575043694:1156060..1156117Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1156457..1156519TCONS_00051572-exon-scaffold_202-1491911889:1156457..1156519Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1156457..1156519TCONS_00051572-exon-scaffold_202-1510915933:1156457..1156519Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1156457..1156519TCONS_00051572-exon-scaffold_202-1575043694:1156457..1156519Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1156907..1158256TCONS_00051572-exon-scaffold_202-1491911889:1156907..1158256Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1156907..1158256TCONS_00051572-exon-scaffold_202-1510915933:1156907..1158256Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1156907..1158256TCONS_00051572-exon-scaffold_202-1575043694:1156907..1158256Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1146754..1158256 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0581639 0.0534203 0.174365 0.0510362 1.46177 0.000535406 0.00669631 1.05254 3.89666 7.78744 2.66824 2.86272 13.6261 11.9551 13.165 11.9951 10.2059 11.0718 16.2869 18.7544 3.00253 2.39182 2.33093 3.7037 1.56442 4.10021 0.399033 0.204904 4.83351 0.0874427
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051572 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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