TCONS_00051572 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051572
Unique NameTCONS_00051572
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3327

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051572 ID=TCONS_00051572|Name=TCONS_00051572|organism=Clytia hemisphaerica|type=transcript|length=3327bp
GGAATATAGAAAAAGAAATAtcgaaaaactgattttttggaactttttag
ATGTTTATGACATGACCAAATGATCAATCAATTAAGAAGTGATATGGTAT
ACCCTGGTGCACGAAACAAAAACGCCATGAATAACGTCGGAGCGGAATTT
ATTTTACATCAATGCTCCTCGGAAGTCAAACTCAATGGATGGCTAAAGAA
AGAATGCGACATTAAAATCAGGAAAGAATtttcggAGAAGCTAGGCATCA
TTTACAAGCACTACCTTTATATGTATGATAACGAAAAGGATAGATCAGCA
ACACACGTCTATGACATCACTCAAACGAAAGTGGAGTACATCAAAGGCAG
CTCACAATGGGGATTCATCATCGAACTTTTAGGCCAAGAGAGAAtcagaa
acaaaaaagaaacggTGAAATTTCTGGTCAGTTCAGAAGCTGAAATGAAT
AATTGGGTCAACGAGATCAACACCATTCAGAAGAAAAGCATTGATACATC
ACCCCGATCGCCAAATGAACCACGTTACGTACCTTCATCGCGTAAAGGAA
TGCCGTTACCGCCGACGCCAGACCAAGaacaaaaacctttaaaacatgAC
TATACCGAAATAAACAGTGTTAGTCATCCAACAGAACAAGGAGATGATGT
TTATAACGTACCTAGAGAATGCGGTGCCCCAATAGTGCCAAATGAAACCA
TAATTGAAGATGATCCATATTCACCTATCACAGAATGTCAGAGTAATGTT
TCAGACACTTCTAATACTAAACCACCACCAGTTCCAAGACATAATATTGC
AATGACCGGGTCACGTGATATTAATGAAAATGAGGCTGGCTTTGGTAATT
ACCAATATCCATCAACACATTATCAGGTACCGAAAAGTAATAGACCGTCA
AACCTTGATATAAATGTTAAAAGCACTGATGCAAACTATCAGCGTCCATC
TAACAGACCAATACCAGCTACACGAAAATCAAAAGTTGAACAAATTCTAG
GAACAAGTCCAGGATATGAATGTCCTTCAAACAGTCATTATGTGGCTCCA
AATAGATTAATACGCCAAAATGGAGCCAATCAACGAGTCCTTCCTCTTAC
ACCTGATGGGCGTGACACAACAGATAACCAAGAACCTCATGAAAACCCAT
ACAAAGTACCATTAAGAGTAAGCACATCTGTTGGACTACCTAATGCTTTA
CCACAGGAAGGACCTAAACCAGCGAAATCACATACGCTACCTTTGGGTAT
AACTCGGCCAACACCGGCTACAAGATTACCGAACCCTAATAAACGTTTAT
CATTACAAGTTGCGAGTTTAGCTGGAGCAACAAATTTGATGCTTTCCTGC
TCGGTCAAAGatgacATGGCTGTGAGAGACAACCCAAGGTCATCAGACGA
TGATAATGAGGAATATCTCGATTTCACGACCGTTCCAAGTGACGAAGAAA
CACCTTACACGACCATAGGTAGTAGACAACGCCCTCATCAGTATACTAAG
TTAAGAAGCAACACCTACAATGAACAATGTATTTCCGAAGATTCGGGCGA
TTATATCGTCATGATGAACCAGGAGAGAACTGTGGAACCTACTACAGTCG
ATACTGAAGAGACATATATCGATATGGCAAGAGGGGAGTTGGTAACGAAT
CAGACGGGTGAAACTGaagaagaacaattttatacatGCATGGACAATGC
GGGAAATAATGATATAGtATTCAACGCGAATGAAGAGCTTTATGACAATA
TCAAATTTACTGATCCTATTTTGAAGGATATCAAGACAGAACAAGACAAA
AAGCTGTTACCTCTTTCCACCTTCCAATTTCATCTCGATAAAGACCAATG
TGCAAGGTTGCTACGGGATGATGGTAGCCCAGGAGTTTACCTTATCAGAA
AGGGAAGTCAAGGGCTAAACGTCTTGATGGCTTCACTTCTTGGAGATATA
AAAAATTACAGAATCTTCATGAGTCAGaacaaactatatttGAAAGATGA
TGAACCGTTCTTTGAACGCTTACCTGATCTCATAGCTCATTACACCGAGT
ATCATTTACCGACATGTCACGCGCGACTGGAAAAACCATACGGAGAATGA
TTGTTGATAGGTTATTTTATTCCAATTATTCATGATGATTGTTATTTTGA
GCTGGAGATGTACAAAAGATTGGTGTTTATTGGTTACGAACAGAATAAAA
AGTATCCTATTTGAAGCGGTGAAAGGCAAGGATAACCAGGAGATGCCTAT
ATTTGGAACAATAATACCTAGTCGAAAAGCTTTTACaataaattgaacaa
atttttgttttcttgatttttatcgaaCAATAATACCGCTGTGAACAAAG
TTATTCcgatttgagaaaaaagagtttTATCTGGCAAGAGAATAATGGCA
AACCAAAATTCACATTCGGCTGAAAATTAATGGCCCTGGTGTACAAAAAA
GCAATAAAGTATAAGACAATTTCGCCTGCATTATCGATGTCCAAGGTTTT
TACTCAcatattttaaaaaaagtgttcaAGATTTTCTTACCATAATTTTT
CGGATTGAAATTTGTGACCATTTGTTGATCGATAGCGAATCtcattgatt
ggttgatattatTGATTTCATTATTGTAAATTATTATCTAGTTTTTTAGT
ATCTAAGAGAAAATTATGACATTTTCCATTAACAGTGTGTCCAGAAAAAG
CGGCACAACCTTGATATAAACTAGAACCCCCGTGGCTTCTTGTTGATagt
aacacccctgtgtcacagacccacttggaccccagccccactagaaaatt
tgacaaaaatttcgtccccggtggaaaaataccccGGAATataccccact
gggaaattgactttgatttcattcgcGTTCGAAATTCAGTGTTTAAAAAA
TTGTACTCTAAAACCACCCCCACCGGGTTTTttaaaccttggaacaatag
aatttctatcccccattgagatttcaacaggaatttttatccccactatg
aggaaaaaagttccaccggggctgcgagacaggggtgtatagtaATCATg
acaaactcgaacccagtcctttGGCtggcttttttatgattctgtgaTAG
GATTGTATTATGTTTATCAGTGAAATCAAAAAAAGGTGCAATGGATCTGG
GTAAGAGTGTCTATAGAATTAAATTTCCAAAGTTAATTATTTTctattca
aaaatttgaattgagtaGTAACATTGAGTTGTGTGAGTTTTCCTGGACAC
ACTGTATATCTCATTTATCGATGTAAATATCACTACAGGACGTTTTATTT
CcaataaagaaattttctaTTCTAATT
Run BLAST on NCBI

transcript from alignment at scaffold_202:1146754..1158256+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051572 ID=TCONS_00051572|Name=TCONS_00051572|organism=Clytia hemisphaerica|type=transcript|length=11503bp|location=Sequence derived from alignment at scaffold_202:1146754..1158256+ (Clytia hemisphaerica)
GGAATATAGAAAAAGAAATAtcgaaaaactgattttttggaactttttag
ATGTTTATGACATGACCAAATGATCAATCAATTAAGAAGTGATATGGTAT
ACCCTGGTGCACGAAACAAAAACGCCATGAATAACGTCGGAGCGGAATTT
ATTTTACATCAATGCTCCTCGGAAGTCAAACTCAATGGATGGCTAAAGAA
AGAATGCGACATTAAAATCAGGAAAGAATGTAAGTGATAGGTATATCTAA
GTcaaagaaaaattcgaaaatcgaaTATTGACGTTTTTGATCCCTCAAGT
GATGTGGAACTACTGTGATGTTAGATGATGACCCCTTAAGGAGGGTAGTT
TTTGGTTTCAGGAAGGTTTCTGCAACCATTAGAGAGATTTTCGAGCTGCG
ATAAAGTGCAACTCACAACCGGAACATTCATAAAATGTGAgctggacgtt
gaaacaacgttgtgtgaaTCTTCAAGTGtgactttgaatttgaaatgtaa
tctagTCGATTTCAGTTAACCAATAGTCATATATCTATAAAGCTTTTGTC
ACTAAGCTTCATCCAAACCTTGAAGAAAGTTTCTCAATCCTAGCTGCAAC
CCCTCGACTCCTTCTTTGTAGCTATCACTTTCACCTGCTTTCACACATTC
AAGTGGCCCAAAATCCAGGGGAAAAAGCGCCGAAGGAAAGCAACCTACCG
TGGCTGTGGCTGGGAAGTTTTTTAGACTTCCTAAAGTGCATTTTAGGGGT
TGAAATGTAAAAACTGTAAGGGTTTAAAAGTGAGaagatcgaagtttttt
tgggctaaatttcggaaaatctgaccatttaTTGCCTTGAAGTGGACAAA
AGAATCAAGAGAAAGCAGCGTAAGGATCAGTTTTTCGACCAAATTTACTC
TTGGccatttttttctgcactgtaagggttcaaGGGGGGTTCAAGTTTGA
AATCCTAATTTTTATTGGCATTTACACTAGTTTTTagaccgacccccccc
cccccccttggcctaAATCAATTTTCATGGTACGGTAAAAATTGACAATA
TGTTTCCTATTATCTTCTGAAAGGGGGATATAGTAAACATTCTTTAGAAC
TTCGTTCAAACAAGATTTCCCTAAGTAATCAATCTTACACGACTCTCAGC
AATAAAGTAACCTGAGACACCATTAAGGAACAAACGAAATAAGAGATGAT
GCTTGCTTAAACATGATGCTCAATTATTGCGCAAGTTTTGTAATAGTTTT
GTCgctttatatttttcataagaTACGTCACGATAAtagaaaacaaaaca
caaagGTTGAACAAAAGTTGGCACACGATTACTGCTCAAGTTCCAACGCG
CGCTTTTTTTATGCAATGGCAAATTTCTAAAGATTTCAGGAAAGTCCGAC
AACATTCTGGCCTTCGAAACAACTTTAGGGGTAATTCTTCCAAAGTTAAT
TGATATACAAAGTTAGCGAAGCTTGTCCATGCGTCACTTTTCGGTACCTT
ATCGAGGAAATAGTCACAGATAAGCGACTGATTTTATAAACTGTATTGTA
ACTAAAATTTTCCCTAATCGAAACCCCAGAATTGTGAAAAACATTTATCT
AAAACTTTTGACTGTGGTGAAATCTTTTACTAAAACTTTTGAATCATGTG
AAATTTGTGACAAAAACTTTTGTCTTAAAGGAAATTTgtgacaaaaaact
tttttagagaaatttgTGACTATAATTATGATCCCGATAATAAGGTAGTT
TATGAAACTAATCAAAAGGACGTACACCAAATTACAtttaagaaaaagga
aaattacaAGCATACCTGACAAGTTGTGCAATCTTTCAAATACACCGCAA
TCGAAGGGATCACACCAGACCatttcttaaaaagaaaagaaattcatcAC
AATACACATAAGTTTCTATCATGGCATacctttaaaaatttgtttcgCCC
AGGCTCAGCTCATGTCGAATAGAGAGATGAACTTGCTGGGATTGGACTTA
TAAAGCGCTAAAATTCATAAGCTTCTCTGATTTTATATCAGATTTCTGCC
GTATTTTTGTGTTTTAGCTGACATAATCAGCATTTGTAAAACATCCTTTC
AGCCAACCTTCCAACTGTCAGGAACTATTGTAAATGTTGGCCGATTATGA
CCTAACCTGATGACCATCATAACCcaatttgctaaaatttctgACTGTTG
GATGTTCACAAAACACACAAGAGCGTTaccacacccctgtctcacagccc
ggtggaactttttatctcagtggggataaaaattcctattgaaatcccat
cAATGGGGATTCCTTTGTTCCgaggtaaaaaaattcagtgacaatggttt
tgaagtgcaatttttaaacattgaattttgaatggggatgaaataaaatt
taagtgggctgaaattctaaggtattttctcaccggggacgaaatttttg
tgtGTAACTTGTAAGTTTAAtcattctttgtttttttgtttttttcagtt
tcggAGAAGCTAGGCATCATTTACAAGCACTACCTTTATATGTATGATAA
CGAAAAGGATAGATCAGCAACACACGTCTATGACATCACTCAAACGAAGT
AAGTAGCTTATTGGTACAATTGGTAACAGGAAAAAAAGTGAAGGCATGAA
ATTTTCACTCAATTTGTAACAGGAAAAAAGTTTGtaggaaagaaattttc
actCAAAAGGCAGTTTTTTTTGTCTCCAAGTATTGGTGATAAGGTAACTT
TTGGTATCAAAAACTGAAGATCGATTAATTTTCGGTACACGCTGCCATAC
TTCTTTGTGACGATTTTGAAGTTTGTAAGATGGATGACATAGCTGGTAAG
TCAACACAAAGTTAAGGAGAAATAGCAAATTCTTTAGCCTTTTCAGAGGG
TTCCCAGTGGAGTCCCTTATCAAGCCCTCAGGCGAAAATGAAATTCTAAT
CACAGAATCACGCTGGAAATATTCTCCCACCACGAACTCacacaaaccgc
tgggggcGGGGGTATTTTACCACTGAATAAACTATTCTGTAACCGATTAC
TGGTATTATACTTTATTCTAGAGTGGAGTACATCAAAGGCAGCTCACAAT
GGGGATTCATCATCGAACTTTTAGGCCAAGAGAGAAtcagaaacaaaaaa
gaaacggTGAAATTTCTGGTCAGTTCAGAAGCTGAAATGAATGTAAGGTT
ATAACTGGATTTACTACTAATAAAACAGTGGAATAGTTTCTTTAAAAACA
GCCGACTCGTTTTCAGCTTAAGAATTTATAGAGAATCTTAGTGTAGcccc
agtttgcagagtatggcaaAGCTGCATTCTCAAGAAAAAATTCGGAAATA
CCAAGTTCCGCACTAGAAGAGCGCATCTGATAAAATTGGTCCGGAAAATG
TGTACTAATACCTcggaaattggcccaaaaaggcaaaaaattgctaaaat
taacTGCACTTGTGGAGAAAATAGCGGAACTCTGCACTTGGGGTTGGGAT
TAAAAAACCGTCTGCACTTGCACCTCAAAATTTGCACCTGCACTCGACTT
TTTCCGAGTTGTGCACTCGAGATCTCGAGCAAACGTGccacactctgcaa
actgggAGCCTGGAAGAGAAAAATGATTGAAAGTGTCACTATAATTGATG
CATGTCTTTCTATATAATGTGATAATATAGACAAAATATACGAGGGATTC
AAAGAAGACAATATGTACGTGTGGCAGCGCCTGCGAATTTTTAAAGCTGT
ATTATTATAAGTCGACTCTAAGTAGGATCTAGCCAGCCATATTACATTAC
AATCGTTATAGATCAATTTACAAATTCCGATGCCGACTTTCTCGCTTCAT
TAGAATTCTCTAtatgattttcaaacaaaaaaaccATTGCTTCTTTATAT
TATAGAATTGGGTCAACGAGATCAACACCATTCAGAAGAAAAGCATTGAT
ACATCACCCCGATCGCCAAATGAACCACGTTACGTACCTTCATCGCGTAA
AGGAATGCCGTTACCGCCGACGCCAGACCAAGaacaaaaacctttaaaac
atgACTATACCGAAATAAACAGTGTTAGTCATCCAACAGAACAAGGAGAT
GATGTTTATAACGTACCTAGAGAATGCGGTGCCCCAATAGTGCCAAATGA
AACCATAATTGAAGATGATCCATATTCACCTATCACAGAATGTCAGAGTA
ATGTTTCAGACACTTCTAATACTAAACCACCACCAGTTCCAAGACATAAT
ATTGCAATGACCGGGTCACGTGATATTAATGAAAATGAGGCTGGCTTTGG
TAATTACCAATATCCATCAACACATTATCAGGTACCGAAAAGTAATAGAC
CGTCAAACCTTGATATAAATGTTAAAAGCACTGATGCAAACTATCAGCGT
CCATCTAACAGACCAATACCAGCTACACGAAAATCAAAAGTTGAACAAAT
TCTAGGAACAAGTCCAGGATATGAATGTCCTTCAAACAGTCATTATGTGG
CTCCAAATAGATTAATACGCCAAAATGGAGCCAATCAACGAGTCCTTCCT
CTTACACCTGATGGGCGTGACACAACAGATAACCAAGAACCTCATGAAAA
CCCATACAAAGTACCATTAAGAGTAAGCACATCTGTTGGACTACCTAATG
CTTTACCACAGGAAGGACCTAAACCAGCGAAATCACATACGCTACCTTTG
GGTATAACTCGGCCAACACCGGCTACAAGATTACCGAACCCTAATAAACG
TTTATCATTACAAGTTGCGAGTTTAGCTGGAGCAACAAATTTGATGCTTT
CCTGCTCGGTCAAAGGTATAACTTGAGTTTgctttttttatacaaaaaca
acTGAAATCTGTAATAAAAAGTTTGTAGAAAATAATTTCACAGCATCCAA
AAATActttaagtaaataaaaaaaaaactttgggaatatcttttcaaatt
cGACTAACTTTTTAAAGTAGCATAGAATTGGTGCTTAGAACtttaataat
aaaatattttcagatgacATGGCTGTGAGAGACAACCCAAGGTCATCAGA
CGATGATAATGAGGAATATCTCGATTTCACGACCGTTCCAAGTGACGAAG
AAACACCTTACACGACCATAGGTAGTAGACAACGCCCTCATCAGTATACT
AAGTTAAGAAGCAACACCTACAATGAACAGTAAGAATGTTTGTTTTGGCA
TGATTAGAATTTAATACACGCTATTTTTCTTAATGAACAAAGTATTATAA
TAGTCTCAAAATTggaatacacaggttgcaaaaatAAAGATTGAAGTTAA
Ataacgcttttactcgaaatttttatgtgcttgttacatgacatttattt
ctgattggttcgaatttattaaTACTAATAAAGTTTTTGAGTTGTAAACC
AAGTAACATGGggataaaatcacgtgaactttctcgagtaatcacatgtt
ttgactgcactgcTATAATTGTGCAACCCGTGTGTTGGAGCATTAGAGTG
AAGACTAAATTAGGGTGCGAAAGCGACCTTTACGACGTtgtatttcttga
aaaattttcgTCCGTTTTAAGGCGCGAAATCctacgattttcaaaaaatt
tcgctttTTTCAAACtcacagtgcactttgggaagcctgAAATTTATTCG
TAATGGTCGTACATGCTAGGTCACCCACCTTAAGTGCACCCAGGGGTTTA
AATAGAACAAACTCAACCAATCCATGAACGTCTTGTCTCAGCATCTCTAA
TAAATCAATTaaccgcccccccccccccgaatgtgattttttgttgaatt
ttcttcaaatgaacACACAGAGAAACTTCAAATGAAACTTAATATACCTA
TCAACTCTTGCGCCAAGAACTGTAATGATGGGTATAGGGTTTGAATTAAC
TAGGGACGAATGACGTCAAAAATTCCGAATCTATTGTACTTACTCATATA
ATCACAAATAAAGAAGTTTGAGAGTCTGGAAACTCAGACCATGTTCAGAt
gttacggttccgtttcgctccgagaAGAAATGGTTCCGAAACAAGTTTGA
ACGTCAAAATTGGAGccatcaaaaaagaagacgttacacagcaaaacaga
tcgaaacagtttcgcttcactattttcatcggagcGGAACTGCTCCTTTT
GCTTGCCAAAATGTTTGAAGTCGTTGCTTCNCGGAACTGCTCCTTTtgct
tgctccgaaacgttccgaaactaatatgaacactctcgattCGTAACGAA
AACCAGACCGGAGCGAATAAaaggaaccgtaacgtctgaacatggatTCA
AATCCAATCTTATTGTGACGTCAAGTGCTTACTTTACACCTATCAAGCGC
GAGAAAACTGGGCCCAAGTTTACAAAGAAAGAATGAGGCCAAAATGTTTG
AAGTCGTTGCTTTGATTTTCccattttgacgtcattccttTCTGGTAAAC
TCGAACACAGTCCCCTTCatgctttaaaggttttgtcttTACAtgagagt
gatatcgtttgcttactcatcaatcttacttcacaagctttttcacattg
aattgacacagatgtggagcaagattggtcagaaagaggaaaagaaaaac
agtttatatcagcataatataacaataggcagacactgtcctgatatgaa
acggtaacacttatgtaaaaaggaAACCTTCCTTTAAGGGTTGATAGGAG
TATCATCAATATATTACTTTGTCTTTGTACAGATGTATTTCCGAAGATTC
GGGCGATTATATCGTCATGATGAACCAGGAGAGAACTGTGGAACCTACTA
CAGTCGATACTGAAGAGACATATATCGATATGGCAAGAGGGGAGTTGGTA
ACGAATCAGACGGGTGAAACTGaagaagaacaattttatacatGCATGGA
CAATGCGGGAAATAATGATATAGtgtaagaaaatttaaaattatcagCTT
TACGAAGACgaagacttcttttttttttacatcaagctacacgttttatt
tataagcacatccaaaaattttgaaacattcggatgttctaaacttttcg
aatttaagcctaaaaatattcttaacatattcttattttcaccatttttg
tccattttttcctcagaaatcgggtgtttcagagtttacaaagccttaaa
atgttcttaacttgttctttagtactttggccatcgaagccttatattct
tatatagtttgttcttataaaaaaacgtgtaaacgtGAAAACATCTTGAC
ATCATTTTTGCCATGATGGACTCAAACCCAATCCTATGATTTCATGCGCA
TTTTTTCCATGGATGAAGATAAGTTTCACTTAAAGCTCTGTGTGGGGATA
CCGAAACAATATTCGGAATGATGAAagcaaaaataagaaattatgtgGTT
ACTATTTggttctacacgttttttatataatagCAAAAGGCTTCGAAATC
AAAGATATAAAAACATTATtataacatttaaaggctttgtaATCTTCAAA
ACTTGCAAAATTAGACCAAAATATACTCATACAAGCTTTAGAATAAGAAC
AACTAAGAAAACATATTTAGGCTTACAAATTTAAGAaatatctgaaggct
tcaaaaatctttttttataaatgtatATGCTTTCATTAGATTCAACGCGA
ATGAAGAGCTTTATGACAATATCAAATTTACTGATCCTATTTTGAAGGTA
AGGAAAACAATTTGGTGAAATGAAATTGTGCCACCATACCGaaaattttc
cctattttcgacCAGATTCTTTCGTTTTCCTACTGTTTTTAGCCggattt
tcgattttctttcGCGTGGCTGAAATATTTATACCTTCAAGATaaagaaa
ccaaaattttcgaattgttcgattatttctaatttattgatttttaaatg
ACAGACGTTTGAGAATTTGGCTGTAGAAACTACAAATATAATAGTGTTCT
TCATTTTCAACAGGATATCAAGACAGAACAAGACAAAAAGCTGTTACCTC
TTTCCACCTTCCAATTTCATCTCGATAAAGACCAATGTGCAAGGTAAAAA
GGTTTAGGGTTTAGGTTTAGGTTTGGACACGAGAATCCGACGAGAATCCG
GGAGAAACTTTGGAAAAATATGTACTAGGTAccttaatgggataaaattt
cgcggggacttaatttcacgggtggcactattgggtggaaatattttcac
gatttttcgaCTTAATTTGTGGGGACTTAATTGTCTTTTAATAGTGTCAT
CTGCAATATGACTTCGCGGATAGGcccattttcattatttcctatcatta
tttgcgcctctttgatgcaagcaaccattcaaatagtattaatttgacat
attttgagttttgcttagaaatatttcgcggatgaggccctccCAAATTT
CCATTgtgacttaatttcgcggattttcgtggatgacacccaaatccgcg
aaatttaatccccgcgaaagtttatcccattaaaggcGAAAGCGTAAACG
GTTCCTTTTTCACACCTTGAAAATTATTCCgagaattacaaaaaaataac
aaaaatggtCGTAGTTTTCGGGAATTTTAGACCGAAATCTGTTGCAAATA
GAAGAATTATTGGGAATAAATTAATCAAAGCTTTATAAAAGATGGGATTT
ACGTCTTTTGCAGCAAACCTAGACGATGCTATTGTCCGTATACTATAATA
TATTAtcatgatataacatagtttgtatattataaaacgtaatatgttgc
gcGGCGGAAAAAAGAGTGTGTTCAAGACAACAGCTACCCCCGAAAAAAAC
TCCCGTCTTCACGtatgttcctcttagatgaaactcgttatagactatag
catagtctatagCAAACCTAGTGACAAATGGGAGATAATTTAATTAGTGT
AATTGAAGCACAatcaaaatgtaaaatcaattaGGATTCGATTTCgtttg
ttttcacggggtcaaCGGTCATCCTAATTTGCTATCTATGAACACTGAAC
GAAATATTGGAAGGAGCCAGGATTCGAAACGGGAACCCCAGGATTATGCC
GTTGACACCTTTGACCACTGGACCATTGCTCCTGACAGTATAATTTCCTA
TAGAAAAATTAgtgattttattttatgaaacCCGCCTTTCAGTGACCTGT
AGAATAAGAACTAAaggaaatgaaaacatttttatacCTGTGATTTTTTA
ACAATTCAGTTCTTCGGATGACTTTCAATCTGATGTTATTGTCTCTGAGA
TCAATCAATACCTAAAGCTTTGAAATAaatgtttattaaaatttctttcc
aaTCAGGTTGCTACGGGATGATGGTAGCCCAGGAGTTTACCTTATCAGAA
AGGGAAGTCAAGGGGTAAGCATTTTTTCAGTTGTGGTGTTTCCGATTTTA
GAATCCgatctttgtgttttacagtctTAAACTTTAATAAAAAGAGATGA
GATAGATATTCAAACAAGAAGAGTCATCGAGAACAAGAATTAAattaatt
tattgatttttaatttagaaataaatcaataatcTTTAACAAGGGTAAGC
TAAAACAAATTCAGCTAGATTCTTTAAGGCCATCGAATTAATTTCTCTAC
CAATTTTTAGACTGGTTCCGTAGTCCTCTAAGAATATTATTGAAATCATT
CATGTGAATTCTTTAGGCTTTATTAAActttaaatttctattttttttta
cagCTAAACGTCTTGATGGCTTCACTTCTTGGAGATATAAAAAATTACAG
AATCTTCATGAGTCAGGTATGGTGATGATTAGAGGTTTTtagaacaagct
atataagaacatgagacTTCGATGGCGAAAATTTTTTAGATCaaactaag
aacattttaaggcttcgaaTCTTAAACACCTTTTGAAAGTTAACTATTTC
CCACCGAAAGGTTTGACCTGCGTGATTTTTCACACAAATGCCAGATAAAG
AGTAAAATCCATcgtcagatttcgaaaaatatgccgcACCATGCAAACAA
GGATTATAAAAGGACAGAAACCTTAAGGTTTTTTCTATTGCTTAAAAAGG
TTTAAGCTTCCTCCTTAGCCCTTcgagctttaaactcaatggcccTTACA
TTAGATAAAGCTGTGATATAAACCAAAGtcgattcttttttttctatctc
tagaacaaactatatttGAAAGATGATGAACCGTTCTTTGAACGCTTACC
TGATCTCATAGCTCATTACACCGAGTATCATTTACCGACATGTCACGCGC
GACTGGAAAAACCATACGGAGAATGATTGTTGATAGGTTATTTTATTCCA
ATTATTCATGATGATTGTTATTTTGAGCTGGAGATGTACAAAAGATTGGT
GTTTATTGGTTACGAACAGAATAAAAAGTATCCTATTTGAAGCGGTGAAA
GGCAAGGATAACCAGGAGATGCCTATATTTGGAACAATAATACCTAGTCG
AAAAGCTTTTACaataaattgaacaaatttttgttttcttgatttttatc
gaaCAATAATACCGCTGTGAACAAAGTTATTCcgatttgagaaaaaagag
tttTATCTGGCAAGAGAATAATGGCAAACCAAAATTCACATTCGGCTGAA
AATTAATGGCCCTGGTGTACAAAAAAGCAATAAAGTATAAGACAATTTCG
CCTGCATTATCGATGTCCAAGGTTTTTACTCAcatattttaaaaaaagtg
ttcaAGATTTTCTTACCATAATTTTTCGGATTGAAATTTGTGACCATTTG
TTGATCGATAGCGAATCtcattgattggttgatattatTGATTTCATTAT
TGTAAATTATTATCTAGTTTTTTAGTATCTAAGAGAAAATTATGACATTT
TCCATTAACAGTGTGTCCAGAAAAAGCGGCACAACCTTGATATAAACTAG
AACCCCCGTGGCTTCTTGTTGATagtaacacccctgtgtcacagacccac
ttggaccccagccccactagaaaatttgacaaaaatttcgtccccggtgg
aaaaataccccGGAATataccccactgggaaattgactttgatttcattc
gcGTTCGAAATTCAGTGTTTAAAAAATTGTACTCTAAAACCACCCCCACC
GGGTTTTttaaaccttggaacaatagaatttctatcccccattgagattt
caacaggaatttttatccccactatgaggaaaaaagttccaccggggctg
cgagacaggggtgtatagtaATCATgacaaactcgaacccagtcctttGG
CtggcttttttatgattctgtgaTAGGATTGTATTATGTTTATCAGTGAA
ATCAAAAAAAGGTGCAATGGATCTGGGTAAGAGTGTCTATAGAATTAAAT
TTCCAAAGTTAATTATTTTctattcaaaaatttgaattgagtaGTAACAT
TGAGTTGTGTGAGTTTTCCTGGACACACTGTATATCTCATTTATCGATGT
AAATATCACTACAGGACGTTTTATTTCcaataaagaaattttctaTTCTA
ATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032666XLOC_032666Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051572-exon-scaffold_202-1491911889:1146754..1146982TCONS_00051572-exon-scaffold_202-1491911889:1146754..1146982Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1146754..1146982TCONS_00051572-exon-scaffold_202-1510915933:1146754..1146982Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1146754..1146982TCONS_00051572-exon-scaffold_202-1575043694:1146754..1146982Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1149252..1149351TCONS_00051572-exon-scaffold_202-1491911889:1149252..1149351Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1149252..1149351TCONS_00051572-exon-scaffold_202-1510915933:1149252..1149351Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1149252..1149351TCONS_00051572-exon-scaffold_202-1575043694:1149252..1149351Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1149825..1149945TCONS_00051572-exon-scaffold_202-1491911889:1149825..1149945Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1149825..1149945TCONS_00051572-exon-scaffold_202-1510915933:1149825..1149945Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1149825..1149945TCONS_00051572-exon-scaffold_202-1575043694:1149825..1149945Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1150659..1151568TCONS_00051572-exon-scaffold_202-1491911889:1150659..1151568Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1150659..1151568TCONS_00051572-exon-scaffold_202-1510915933:1150659..1151568Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1150659..1151568TCONS_00051572-exon-scaffold_202-1575043694:1150659..1151568Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1151767..1151932TCONS_00051572-exon-scaffold_202-1491911889:1151767..1151932Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1151767..1151932TCONS_00051572-exon-scaffold_202-1510915933:1151767..1151932Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1151767..1151932TCONS_00051572-exon-scaffold_202-1575043694:1151767..1151932Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1153486..1153677TCONS_00051572-exon-scaffold_202-1491911889:1153486..1153677Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1153486..1153677TCONS_00051572-exon-scaffold_202-1510915933:1153486..1153677Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1153486..1153677TCONS_00051572-exon-scaffold_202-1575043694:1153486..1153677Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1154393..1154450TCONS_00051572-exon-scaffold_202-1491911889:1154393..1154450Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1154393..1154450TCONS_00051572-exon-scaffold_202-1510915933:1154393..1154450Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1154393..1154450TCONS_00051572-exon-scaffold_202-1575043694:1154393..1154450Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1154717..1154796TCONS_00051572-exon-scaffold_202-1491911889:1154717..1154796Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1154717..1154796TCONS_00051572-exon-scaffold_202-1510915933:1154717..1154796Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1154717..1154796TCONS_00051572-exon-scaffold_202-1575043694:1154717..1154796Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1156060..1156117TCONS_00051572-exon-scaffold_202-1491911889:1156060..1156117Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1156060..1156117TCONS_00051572-exon-scaffold_202-1510915933:1156060..1156117Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1156060..1156117TCONS_00051572-exon-scaffold_202-1575043694:1156060..1156117Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1156457..1156519TCONS_00051572-exon-scaffold_202-1491911889:1156457..1156519Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1156457..1156519TCONS_00051572-exon-scaffold_202-1510915933:1156457..1156519Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1156457..1156519TCONS_00051572-exon-scaffold_202-1575043694:1156457..1156519Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1491911889:1156907..1158256TCONS_00051572-exon-scaffold_202-1491911889:1156907..1158256Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1510915933:1156907..1158256TCONS_00051572-exon-scaffold_202-1510915933:1156907..1158256Clytia hemisphaericaexon
TCONS_00051572-exon-scaffold_202-1575043694:1156907..1158256TCONS_00051572-exon-scaffold_202-1575043694:1156907..1158256Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1146754..1158256 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0581639	0.0534203	0.174365	0.0510362	1.46177	0.000535406	0.00669631	1.05254	3.89666	7.78744	2.66824	2.86272	13.6261	11.9551	13.165	11.9951	10.2059	11.0718	16.2869	18.7544	3.00253	2.39182	2.33093	3.7037	1.56442	4.10021	0.399033	0.204904	4.83351	0.0874427
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051572 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top