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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051595 ID=TCONS_00051595|Name=TCONS_00051595|organism=Clytia hemisphaerica|type=transcript|length=385bp
CAAGTATTTTTATCATTTcagagaaaaatacaaaaatgattgaaaaatga
caaattccTTAGCTTATTACAGATTTGAAGCCGTTTTACTGTTATATGGC
GTTGATAACTTGTTGAAGTGGTTTTCCGGACACAGAATAGCGATACGATA
CATCGTTTGAAAACCTATCAATATGGACAATGAGGTTTTCTTCAGTATTG
GAGAAAATACTGGATTGGAGAAATGGATTATTTCCCATTAAAATGCTGCG
ATGCGAGCTTGATAATCAGGAAGCTGTCTATGCTAAAGAAGTTTCTTTTA
ATATTGGCTCCTATGGTCCCAAATTGGCATTCGAAATGAGGATCTCTGAA
CGTAGCTTTTATGGTTTATCGACGGTTATGTATAG Run BLAST on NCBI transcript from alignment at scaffold_202:109917..111142- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051595 ID=TCONS_00051595|Name=TCONS_00051595|organism=Clytia hemisphaerica|type=transcript|length=1226bp|location=Sequence derived from alignment at scaffold_202:109917..111142- (Clytia hemisphaerica)
CAAGTATTTTTATCATTTCAGAGAAAAATACAAAAATGATTGAAAAATGA
CAAATTCCTTAGCTTATTACAGATTTGAAGCCGTTTTACTGTTATATGGC
GTTGATAACTTGTTGAAGTGGTTTTCCGGACACAGAATAGCGATACGATA
CATCGTTTGAAAACCTATCAATATGGACAATGAGGTTTTCTTCAGTATTG
GAGAAAATACTGGATTGGAGAAATGGATTATTTCCCATTAAAATGCTGCG
ATGCGAGGTATTATTCATTTATTACATTTTAAATTTGGTTTTGATGTAAG
AAACTTTTTTAATGTGTATGGGAATGTTACAGGTTACTCTTTCTTTGCAA
AATTCTGTAAACATATCTCATAGATTTTTTAATAGAGGGGATGCCAATTT
ATTGGGGGGGGGCCTTTGTAGAGAGGTACCAACATTGTCCTAAAAAAGGG
AAATAGGAATGTAGCCTCGAGACATAAAATAAATGAACAAATCACTTCAA
AATCTATTGTTTATCACGGAAAGTAAAAGCTAGGCAAATCAAAAAATATT
TTTAATGATTTTTTCAGCTTGATAATCAGGAAGCTGTCTATGCTAAAGAA
GTTTCTTTTAATATTGGCTCCTATGGTCCCAAATTGGCATTCGAAATGAG
GATCTCTGAACGTGTAAGACCTTTCGTTATTTTACGATTTAGTTATTTTG
TAAGGTATGAAGGGGTAGGTGAAATGCATCAAATTGTCAATACTTTTTGT
AAGTTTTCTTTAAAGGGGGTAAAAGCAATTAATGAGGACACCTTGATAAA
ATGGTATTCCGATGGTGGACCGGCGGCCGTCTCCGCTGAAATTCTAAAGG
AGATGGCCAATTTCCCATTGGATAGGACTGCTAGTCAGCCTTTGATGTAC
CGCATCGCCAATCGGAATCAGCTACCCTGTCCGAAGCTTGGAAATAATAA
GGTTGGTCCTGCCTATCCCCGAAAGCAAAGGCTGGAGTTCGGGCCTCAAG
CTCCGGTGTGACGCGGTCTGGGGAAATTCTGTAATTAAATCCTCCCTGAT
ATTAAAAATTCTCCTGGACTTGGGGAGCTTTAGCGTGTCGAAAGAAAATT
TCTACATCAGGTGCCAGATAAATTACTTATAATAAATAAATATAACTGGA
CGCTGTTTCCTCTTGCTCATCGGTTGACTCTATTGTTTCTCTAGAGCTTT
TATGGTTTATCGACGGTTATGTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051595-exon-scaffold_202-1575043694:110886..111142 | TCONS_00051595-exon-scaffold_202-1575043694:110886..111142 | Clytia hemisphaerica | exon |
| TCONS_00051595-exon-scaffold_202-1575043694:110480..110575 | TCONS_00051595-exon-scaffold_202-1575043694:110480..110575 | Clytia hemisphaerica | exon |
| TCONS_00051595-exon-scaffold_202-1575043694:109917..109948 | TCONS_00051595-exon-scaffold_202-1575043694:109917..109948 | Clytia hemisphaerica | exon |
| TCONS_00051595-exon-scaffold_202-1510915933:110886..111142 | TCONS_00051595-exon-scaffold_202-1510915933:110886..111142 | Clytia hemisphaerica | exon |
| TCONS_00051595-exon-scaffold_202-1510915933:110480..110575 | TCONS_00051595-exon-scaffold_202-1510915933:110480..110575 | Clytia hemisphaerica | exon |
| TCONS_00051595-exon-scaffold_202-1510915933:109917..109948 | TCONS_00051595-exon-scaffold_202-1510915933:109917..109948 | Clytia hemisphaerica | exon |
| TCONS_00051595-exon-scaffold_202-1491911889:110886..111142 | TCONS_00051595-exon-scaffold_202-1491911889:110886..111142 | Clytia hemisphaerica | exon |
| TCONS_00051595-exon-scaffold_202-1491911889:110480..110575 | TCONS_00051595-exon-scaffold_202-1491911889:110480..110575 | Clytia hemisphaerica | exon |
| TCONS_00051595-exon-scaffold_202-1491911889:109917..109948 | TCONS_00051595-exon-scaffold_202-1491911889:109917..109948 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:109917..111142 - |
Blast
The following BLAST results are available for this feature:
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