TCONS_00051667 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051667
Unique NameTCONS_00051667
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2167

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051667 ID=TCONS_00051667|Name=TCONS_00051667|organism=Clytia hemisphaerica|type=transcript|length=2167bp
CAAAACAGAAAATCTACACATTGACAAGAACAAGATCATTATGTTTCGTA
AAGGCTGTACCAACACATACTTGAGGCCAGTTTCTTATATTTTCCTTTTC
GTATCTCTGGCTATCACAATGGTTTCGTTTTGTACAAGTAGCTGGTATAG
TAAGATCAATGAGAAAGgaatcaaagttttcaaaggGATTTGGAATGTTT
GTGAAGGCAAACAAGACTGGCCAGCATACTGTCATTTCTTACCTGAACCA
CCGACGCCTGACAATCCGCATGACGATCCCTTCTTTGATATATCATCAGA
GGAGCTGACAGGCGTGAGGGTGTTGATCTCAATGGCAATCTTATTTATGG
TGGGCGCACTTGGTTATCCGCCCTTCTTCAAGCAAATGTCAACAGGAATT
CTGAAGATTGGTTTGATGTCAGTTCTTTCAGGAATTGCAGgttCTTGTTT
GTTCACAGCCATGTTGATTATGACTCACCAAATGAACAGTATGGATCCAA
TCCCAAACTTTGGATATTCTTACATCATGGGATGGGTATCAACAGGAATG
TGTTTCGTAACTGCTTGTTTGATTTATATCGCTTCCAAAGATAATGTTTA
CGTGGAAGGACTGTATTAAGTGAAgtttgaaaacctttaacaatcAATAC
GAAGCTGTCCTTTAGGGGTGGTTCCATCATAGAGTTTACATCACGAGTAT
TACGAATCGAGACTCATGGACTACAAACTATCAACTCTTCCAGAAGACAA
AAGCTAACATTGTAGGCATCGGTGCCTGATACAATGAGTGAAAATAGAAA
GTGGTTGAAACTTCCAATAATGTTAATGTTGAACTCCATTGACTGGGAAT
GTTAAGAGAAACCatcttttcaaaaacaatattaTGTCGAGAAAAAGTGT
TGCGATGGGAGAATCGGGTGTCATAATGCAGAATGATCAAAATGCCTCTT
CAAATAGTATTCAGTATGTTAGAGGGACTGTATGTTTTGAACATTAAGAT
GAGGTTGATCAGCTGCCCGAAGAACGAATATCGAAAAATGAATTTGGAAT
GGAGCTACAATCCAGAGAAAGATATACACAATTCTCCGGATCCGTGGATC
CGTAGTAACGAACACTATATACAAACAACTTACTTATTAATGAGAGATGA
ATTACTTCCATACGATCAACTAATGTTTTAGATATAACAACATTCGGATT
GAATGGATACGTTGtaaaaaaaattgccaaaaactgATCATAAGTACTTC
gatgggataaatttttgcagggattaaatttcgcggatttcggaTTTTGG
TGTTATCCTTAAAAATAAGTCCAGAAAGAATTGTAAAGGGCTTCATCTGC
GAAAATAAGTCCCCGCAAAATGTTCAAATTTCACGGATAGGTAATCTACA
AATGATATTTACAACGAATAAGGAGATCGCGTCGACCAGTTCATAGAAAA
CATTACCTCTGTACCTTTGATTTGAAAACTGTGTTGTTTTTCTGATTTCg
tagaaaagttaaaatgtaaaatctacAAACCTGTCGGTACTATAGTCTGA
CAACTGGTTTCAAATTAGAAAGATTCTCTAAAGATAATAGTTTCTCGTGA
GCTTTTAACGAGTCAATGATTTCATGTAAATTTGATCCACCATTTAATAA
GTCCTCTACTCCGTGCAATGTTAGACCGATACGATGATCAGTGATTCGGT
CTTGTGGATAATTATAAGTTCGTATACGTTCTGATCTTAGGGCGGACCCA
ATTTGGATACGCCGTGCGTCACTACGTTCTTTCATTGCACGTGTCCGCTC
CTCGTCGTAAAGTTTGGCGCTCAGCACTTGTAATGCCTTCTGCCGATTCA
TAATTTGTGATCTGCCATCTTGCATTGAAACTGTCATTCCTGTTGGTAAA
TGCGTCACCCGTACCGCACTATCGGTCGTATTGACATGTTGACCGCCGGC
ACCAGACGATTTAAAGGTATCTATTTTNGGTCGTATTGACGTGTTGACCG
CCGGCACCAGACGATTTAAAGGTATCTATTTTGACGTCTTTCATGTCGAG
AACGAAGCCAACGTTTTCAGGTTGCGGAAGTACGGCAACGGAAATAGTTG
ACGTGTGTACGCGGCCTTGTGATTCAGTAACGGGGATACGTTGAACTCGA
TGGACACCTATTTCATG
Run BLAST on NCBI

protein sequence of TCONS_00051667-protein

>TCONS_00051667-protein ID=TCONS_00051667-protein|Name=TCONS_00051667-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
KTENLHIDKNKIIMFRKGCTNTYLRPVSYIFLFVSLAITMVSFCTSSWYS
KINEKGIKVFKGIWNVCEGKQDWPAYCHFLPEPPTPDNPHDDPFFDISSE
ELTGVRVLISMAILFMVGALGYPPFFKQMSTGILKIGLMSVLSGIAGSCL
FTAMLIMTHQMNSMDPIPNFGYSYIMGWVSTGMCFVTACLIYIASKDNVY
VEGLY
Run BLAST on NCBI

transcript from alignment at scaffold_202:1217314..1221950-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051667 ID=TCONS_00051667|Name=TCONS_00051667|organism=Clytia hemisphaerica|type=transcript|length=4637bp|location=Sequence derived from alignment at scaffold_202:1217314..1221950- (Clytia hemisphaerica)
CAAAACAGAAAATCTACACATTGACAAGAACAAGATCATTATGTTTCGTA
AAGGCTGTACCAACACATACTTGAGGCCAGTTTCTTATATTTTCCTTTTC
GTATCTCTGGCTATCACAATGGTTTCGTTTTGTACAAGTAGCTGGTATAG
TAAGATCAATGAGAAAGGAATCAAAGTTTTCAAAGGGATTTGGAATGTTT
GTGAAGGCAAACAAGACTGGCCAGCATACTGTCATTTCTTACCTGAACCA
CCGACGCCTGACAATCCGCATGACGATCCCTTCTTTGATATATCATCAGG
TAAGTTACGATCAAACCCTCGTCCCGCCGTGTATCCTAAGGCATTTTTAC
AAACATCCCCTTTTCACAGACCCGGTGAGATTTCTTCAGCTAGTGGGGGT
AAAAAAAGCGGAGCAAAACTCAATGGGGGGATTGATATTCCCATTTTGCT
TATGACTGGGAATTTGAATTCCATTGTTTTTGAGCAAGAAAATTCAGTGG
CAATGGAATAAAATAGCACAATAATTTGCAGCGGGGACAAAAATTAGAGT
AAAATATTCCACCGGGGAGGATATCGGACGAGCCAATGGAGTTATGAGAA
GGGGGTGTTTTTAACGTTTCCTGTAGAGACCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAGCTTAGAATTTCTTTTGATACATTTTATAAAAGAAATCAA
AAGACTTTAACGACCAATTACCGACACATTCAACTCCTGTTTTTCTTTAT
ACCTCTATGAGAGACCAAAGAATATGATTTCGCACTATTTTCGTAAGCAG
GCAAAGCCCTTGTATCGGTGCAGGGAACGGGTTTAATTGCAGCCTAAATT
GCTTTCACTTTGAATTATGGCATGGAATCTCTATCATTTTCAATGTTATT
GATAGTATTGAAAGTCTAAACAAAACATCTAAATTAAAAAAGTTTATACC
ACACATTGGCTGACTAAAATATTTAAGAAATTTAAGCAAATCATAAAAAA
GTAGAAATACCCAAGAACTTAGCTGGTACTAAATGCCTAAGCAAGGTTTA
TTCATCGTCCAAAGCATCCGAATAACATATAAAACGCTCAAACAAGTACT
CTTTCCAGTTATCTTGAATATCCTTGACTTTTTCTCTATTTTAGAGGAGC
TGACAGGCGTGAGGGTGTTGATCTCAATGGCAATCTTATTTATGGTGGGC
GCACTTGGTTATCCGCCCTTCTTCAAGCAAATGTCAACAGGAATTCTGAA
GATTGGTTTGATGTCAGTTCTTTCAGGAATTGCAGGTTAATATAATGTTT
TTAATTCTGAAGTGATTGGGAAAGTACCATAAAAGTGGATTAATTTTGGC
GGGGGATTAATTTGTCGATAGATCAATTTCATAAAATTTGGCGTGGATTG
TGGATTTAGTTTGGCGAATTGCAAATTTTGANATTTAATTTGGCGATTGG
CCAAAATACGAATTTTGGCGGGGGATTAATTTGTCGATAGATCAATTTCA
TAAAATTTGGCGTGGATTGTGGATTTAGTTTGGCGAATTGCAAATTTTGA
GACGTTAAAATGGATGAAAATTACTATACAATATACTGTAAAGTTATTGT
TTTTGCATAATATTCTTTTTGTTAAATTTGGTGAATGGTGGGTCAAATTA
AATCCCCGCCAAAAATTAACCCACTTAAGGTGACGAGAGAAAGAGAAACT
AGTATCATGTCCCTGTCCCTCGTGTGTTTTTTTATGATCCTGATAGTGCC
CGTGAAAGAAAGCACGATGGTTCCACGTCAATCTAAGAGAAGTGTGTTTG
GCTCTGGCGTACGAGATAGGAGGAATATACTAGGGAAAAATGTTTTTGGC
ACAATTTTAGAGATTTAATGTTAGGACAAAATCAAAACCTAAAACATGTT
GACCTATTGATTTCGGGATAAAATTATTATATAAAATAATTCAGCCCTGA
CTCAATGTAACCAAAAAGGGATCATTAGCTCCTCAAAGAATTTGTGTTAT
TCACAAAGTAGTGTTTTATTTGGAAACATACCGGGCGTTTCTCACTAATT
TTCAATTTAAACAAATAAAATTAGTGAGAAACATCCGGACTATTTTCAGT
GCCTCCGTATAAAACATTACGTTATAAATATCATGAACTGTCCCTTCAAA
AGACACAAAAACATCTTAAAACGCAAACCTCACTATAAAACTACTTTTTT
TTTATTTCAGGTTCTTGTTTGTTCACAGCCATGTTGATTATGACTCACCA
AATGAACAGTATGGATCCAATCCCAAACTTTGGATATTCTTACATCATGG
GATGGGTATCAACAGGAATGTGTTTCGTAACTGCTTGTTTGATTTATATC
GCTTCCAAAGATAATGTTTACGTGGAAGGACTGTATTAAGTGAAGTTTGA
AAACCTTTAACAATCAATACGAAGCTGTCCTTTAGGGGTGGTTCCATCAT
AGAGTTTACATCACGAGTATTACGAATCGAGACTCATGGACTACAAACTA
TCAACTCTTCCAGAAGACAAAAGCTAACATTGTAGGCATCGGTGCCTGAT
ACAATANGGGGGCGCTTCCATCATAGAGTTTACATCACGAGTATTACGAA
CCGAGACGTTTTTTGGACTACAAATCATAAGCTATTCCAGAAGACAAAAG
CTAACATTGTAGGCATCGGTGCCTGATACAATGAGTGAAAATAGAAAGTG
GTTGAAACTTCCAATAATGTTAATGTTGAACTCCATTGACTGGGAATGTT
AAGAGAAACCATCTTTTCAAAAACAATATTATGTCGAGAAAAAGTGTTGC
GATGGGAGAATCGGGTGTCATAATGCAGAATGATCAAAATGCCTCTTCAA
ATAGTATTCAGTATGTTAGAGGGACTGTATGTTTTGAACATTAAGATGAG
GTTGATCAGCTGCCCGAAGAACGAATATCGAAAAATGAATTTGGAATGGA
GCTACAATCCAGAGAAAGATATACACAATTCTCCGGATCCGTGGATCCGT
AGTAACGAACACTATATACAAACAACTTACTTATTAATGAGAGATGAATT
ACTTCCATACGATCAACTAATGTTTTAGATATAACAACATTCGGATTGAA
TGGATACGTTGTAAAAAAAATTGCCAAAAACTGATCATAAGTACTTCGAT
GGGATAAATTTTTGCAGGGATTAAATTTCGCGGATTTCGGATTTTGGTGT
TATCCTTAAAAATAAGTCCAGAAAGAATTGTAAAGGGCTTCATCTGCGAA
AATAAGTCCCCGCAAAATGTTCAAATTTCACGGATAGGTAATCTACAAAT
GATATTTACAACGAATAAGGAGATCGCGTCGACCAGTTCATAGAAAACAT
TACCTCTGTACCTTTGATTTGAAAACTGTGTTGTTTTTCTGATTTCGTAG
AAAAGTTAAAATGTAAAATCTACAAACCTGTCGGTACTATAGTCTGACAA
CTGGTTTCAAATTAGAAAGATTCTCTAAAGATAATAGTTTCTCGTGAGCT
TTTAACGAGTCAATGATTTCATGTAAATTTGATCCACCATTTAATAAGTC
CTCTACTCCGTGCAATGTTAGACCGATACGATGATCAGTGATTCGGTCTT
GTGGATAATTATAAGTTCGTATACGTTCTGATCTTAGGGCGGACCCAATT
TGGATACGCCGTGCGTCACTACGTTCTTTCATTGCACGTGTCCGCTCCTC
GTCGTAAAGTTTGGCGCTCAGCACTTGTAATGCCTTCTGCCGATTATCGT
ATAATATCAAAGCGCTTAGACTCACTGATTGCCAGACTACGCTATAATAA
CTTGGACCTATTTATATTAGTAGTCTCATGGTCTCAAAGTCTTACATCAG
AATCATCGATCTAAATTATGAGCTACCCCCGAGACAAACTTTCGCGATTT
TCATAAATTCTGGCCATCTTCGCGAAATTAGAATACTGATAACGGTTCAG
GTCGTTTAGTTATCTTACCATAATTTGTGATCTGCCATCTTGCATTGAAA
CTGTCATTCCTGTTGGTAAATGCGTCACCCGTACCGCACTATCGGTCGTA
TTGACATGTTGACCGCCGGCACCAGACGATTTAAAGGTATCTATTTTNGG
TCGTATTGACGTGTTGACCGCCGGCACCAGACGATTTAAAGGTATCTATT
TTGACGTCTTTCATGTCGAGAACGAAGCCAACGTTTTCAGGTTGCGGAAG
TACGGCAACGGAAATAGTTGACGTGTGTACGCGGCCTTGTGATTCAGTAA
CGGGGATACGTTGAACTCGATGGACACCTATTTCATG

Coding sequence (CDS) from alignment at scaffold_202:1217314..1221950-

>TCONS_00051667 ID=TCONS_00051667|Name=TCONS_00051667|organism=Clytia hemisphaerica|type=CDS|length=1854bp|location=Sequence derived from alignment at scaffold_202:1217314..1221950- (Clytia hemisphaerica)
GTTCTTGTTTGTTCACAGCCATGTTGATTATGACTCACCAAATGAACAGT
ATGGATCCAATCCCAAACTTTGGATATTCTTACATCATGGGATGGGTATC
AACAGGAATGTGTTTCGTAACTGCTTGTTTGATTTATATCGCTTCCAAAG
ATAATGTTTACGTGGAAGGACTGTATTAAAGGAGCTGACAGGCGTGAGGG
TGTTGATCTCAATGGCAATCTTATTTATGGTGGGCGCACTTGGTTATCCG
CCCTTCTTCAAGCAAATGTCAACAGGAATTCTGAAGATTGGTTTGATGTC
AGTTCTTTCAGGAATTGCAGAAAACAGAAAATCTACACATTGACAAGAAC
AAGATCATTATGTTTCGTAAAGGCTGTACCAACACATACTTGAGGCCAGT
TTCTTATATTTTCCTTTTCGTATCTCTGGCTATCACAATGGTTTCGTTTT
GTACAAGTAGCTGGTATAGTAAGATCAATGAGAAAGGAATCAAAGTTTTC
AAAGGGATTTGGAATGTTTGTGAAGGCAAACAAGACTGGCCAGCATACTG
TCATTTCTTACCTGAACCACCGACGCCTGACAATCCGCATGACGATCCCT
TCTTTGATATATCATCAGGTTCTTGTTTGTTCACAGCCATGTTGATTATG
ACTCACCAAATGAACAGTATGGATCCAATCCCAAACTTTGGATATTCTTA
CATCATGGGATGGGTATCAACAGGAATGTGTTTCGTAACTGCTTGTTTGA
TTTATATCGCTTCCAAAGATAATGTTTACGTGGAAGGACTGTATTAAAGG
AGCTGACAGGCGTGAGGGTGTTGATCTCAATGGCAATCTTATTTATGGTG
GGCGCACTTGGTTATCCGCCCTTCTTCAAGCAAATGTCAACAGGAATTCT
GAAGATTGGTTTGATGTCAGTTCTTTCAGGAATTGCAGAAAACAGAAAAT
CTACACATTGACAAGAACAAGATCATTATGTTTCGTAAAGGCTGTACCAA
CACATACTTGAGGCCAGTTTCTTATATTTTCCTTTTCGTATCTCTGGCTA
TCACAATGGTTTCGTTTTGTACAAGTAGCTGGTATAGTAAGATCAATGAG
AAAGGAATCAAAGTTTTCAAAGGGATTTGGAATGTTTGTGAAGGCAAACA
AGACTGGCCAGCATACTGTCATTTCTTACCTGAACCACCGACGCCTGACA
ATCCGCATGACGATCCCTTCTTTGATATATCATCAGGTTCTTGTTTGTTC
ACAGCCATGTTGATTATGACTCACCAAATGAACAGTATGGATCCAATCCC
AAACTTTGGATATTCTTACATCATGGGATGGGTATCAACAGGAATGTGTT
TCGTAACTGCTTGTTTGATTTATATCGCTTCCAAAGATAATGTTTACGTG
GAAGGACTGTATTAAAGGAGCTGACAGGCGTGAGGGTGTTGATCTCAATG
GCAATCTTATTTATGGTGGGCGCACTTGGTTATCCGCCCTTCTTCAAGCA
AATGTCAACAGGAATTCTGAAGATTGGTTTGATGTCAGTTCTTTCAGGAA
TTGCAGAAAACAGAAAATCTACACATTGACAAGAACAAGATCATTATGTT
TCGTAAAGGCTGTACCAACACATACTTGAGGCCAGTTTCTTATATTTTCC
TTTTCGTATCTCTGGCTATCACAATGGTTTCGTTTTGTACAAGTAGCTGG
TATAGTAAGATCAATGAGAAAGGAATCAAAGTTTTCAAAGGGATTTGGAA
TGTTTGTGAAGGCAAACAAGACTGGCCAGCATACTGTCATTTCTTACCTG
AACCACCGACGCCTGACAATCCGCATGACGATCCCTTCTTTGATATATCA
TCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032702XLOC_032702Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051667-proteinTCONS_00051667-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051667-exon-scaffold_202-1575043694:1221652..1221950TCONS_00051667-exon-scaffold_202-1575043694:1221652..1221950Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1575043694:1220316..1220456TCONS_00051667-exon-scaffold_202-1575043694:1220316..1220456Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1575043694:1219073..1219390TCONS_00051667-exon-scaffold_202-1575043694:1219073..1219390Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1575043694:1217856..1218945TCONS_00051667-exon-scaffold_202-1575043694:1217856..1218945Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1575043694:1217314..1217632TCONS_00051667-exon-scaffold_202-1575043694:1217314..1217632Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1510915933:1221652..1221950TCONS_00051667-exon-scaffold_202-1510915933:1221652..1221950Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1510915933:1220316..1220456TCONS_00051667-exon-scaffold_202-1510915933:1220316..1220456Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1510915933:1219073..1219390TCONS_00051667-exon-scaffold_202-1510915933:1219073..1219390Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1510915933:1217856..1218945TCONS_00051667-exon-scaffold_202-1510915933:1217856..1218945Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1510915933:1217314..1217632TCONS_00051667-exon-scaffold_202-1510915933:1217314..1217632Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1491911889:1221652..1221950TCONS_00051667-exon-scaffold_202-1491911889:1221652..1221950Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1491911889:1220316..1220456TCONS_00051667-exon-scaffold_202-1491911889:1220316..1220456Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1491911889:1219073..1219390TCONS_00051667-exon-scaffold_202-1491911889:1219073..1219390Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1491911889:1217856..1218945TCONS_00051667-exon-scaffold_202-1491911889:1217856..1218945Clytia hemisphaericaexon
TCONS_00051667-exon-scaffold_202-1491911889:1217314..1217632TCONS_00051667-exon-scaffold_202-1491911889:1217314..1217632Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1217314..1221950 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	3.37866	3.79848	2.45382	2.01012	1.16828	1.98275	1.77011	2.20147	1.00151	1.29538	1.64135	1.15018	0.926639	2.56929	2.08816	0.902609	2.01576	1.89748	1.97818	2.90989	1.34985	0.842672	0	3.9194e-10
Blast
[Close]
BLAST of TCONS_00051667 vs. Swiss-Prot (Human)
Match: RF1ML (Peptide chain release factor 1-like, mitochondrial OS=Homo sapiens GN=MTRF1L PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.903e-38
Identity = 73/137 (53.28%), Postives = 95/137 (69.34%), Query Frame = -2 
Query: 1597 VNTSIRPK---IDTFKSSGAGGQHVNTTDSAVRVTHLPTGMTVSMQDGRSQIMNRQKALQVLSAKLYDEERTRAMKERSDARRIQIGSALRSERIRTYNYPQDRITDHRIGLTLHGVEDLLNGGSNLHEIIDSLKAH 1998
            +N  I PK   IDT ++SGAGGQHVNTTDSAVR+ HLPTG+    Q  RSQ+ N++ A+  L AKLY       + +R +AR+IQIGS  RSE+IRTYN+PQ+R+TDHRI  TLH +E  + G   L E++ SLK +
Sbjct:  230 INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEEINKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELVQSLKEY 366

HSP 2 Score: 93.5893 bits (231), Expect = 2.328e-20
Identity = 42/62 (67.74%), Postives = 53/62 (85.48%), Query Frame = -1 
Query: 1979 EIGVHRVQRIPVTESQGRVHTSTISVAVLPQPENVGFVLDMKDVKIDTFKSSGAGGQHVNTT 2164
            E GVHRVQR+P TE QGRVHTST++VA+LPQP  +  V++ KD++IDT ++SGAGGQHVNTT
Sbjct:  196 EGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTT 257
The following BLAST results are available for this feature:
BLAST of TCONS_00051667 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RF1ML4.903e-3853.28Peptide chain release factor 1-like, mitochondrial... [more]
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