TCONS_00051695 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051695
Unique NameTCONS_00051695
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length232

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051695 ID=TCONS_00051695|Name=TCONS_00051695|organism=Clytia hemisphaerica|type=transcript|length=232bp
GAGAGATCAAATATGGCGTAACAAAGACATAAGCCTGAAGCTGAAATTAC
GACTCTACAACGCGCTCATCGTCCCCATAGCAATTTATGCCTCGGAAACC
TGGACTCTGAAAAAATCAGATACACAGTTACTGCTAGTTTTCGAAATGAG
ATGTTTCAGATCACTTCTCGGCCTTACATTAATGGACCGTGTTCGTAATG
TTGAAATCAGAAACCGGCTTGGAGTCACTACC
Run BLAST on NCBI

transcript from alignment at scaffold_202:332869..333100

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051695 ID=TCONS_00051695|Name=TCONS_00051695|organism=Clytia hemisphaerica|type=transcript|length=232bp|location=Sequence derived from alignment at scaffold_202:332869..333100 (Clytia hemisphaerica)
GGTAGTGACTCCAAGCCGGTTTCTGATTTCAACATTACGAACACGGTCCA TTAATGTAAGGCCGAGAAGTGATCTGAAACATCTCATTTCGAAAACTAGC AGTAACTGTGTATCTGATTTTTTCAGAGTCCAGGTTTCCGAGGCATAAAT TGCTATGGGGACGATGAGCGCGTTGTAGAGTCGTAATTTCAGCTTCAGGC TTATGTCTTTGTTACGCCATATTTGATCTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032726XLOC_032726Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051695-exon-scaffold_202-1491911889:332869..333100TCONS_00051695-exon-scaffold_202-1491911889:332869..333100Clytia hemisphaericaexon
TCONS_00051695-exon-scaffold_202-1510915933:332869..333100TCONS_00051695-exon-scaffold_202-1510915933:332869..333100Clytia hemisphaericaexon
TCONS_00051695-exon-scaffold_202-1575043694:332869..333100TCONS_00051695-exon-scaffold_202-1575043694:332869..333100Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:332869..333100 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.282969 0 1.61845 0 1.48937 1.87865 2.28623 3.89298 1.06776 8.7199 2.72496 4.76236 5.818 0 0 2.81307 1.40382 1.08743 2.14334 0 0 0 0.456666 9.63569 3.92084 1.40268 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051695 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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