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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051697 ID=TCONS_00051697|Name=TCONS_00051697|organism=Clytia hemisphaerica|type=transcript|length=1535bp
GTTTATTTGAATATTCATGACATGCACCATAGCAATGTCTTCCTCGGACC
CAACAGctaattggttgaaagtgacgtattgactgattttacgtcactaa
caaccaatcagctgttttgTCCGTggtgtaatgtcagaagacattgcagt
ggtgcgtatcatgaatttgaaaaaagcttCTTTTCAAGCTCGAAAatgaa
actaaattttttttgcatgttCATTAATACTCTCATTTGGTCATCGATGT
CAGTGGAGGGAATGTTTGACGACGTTAAACAAGGATTCTTTACGTGTGAC
GAAATAAGAAATGTAACTCTCGTGCTCAATACTCAAACTGAGTTATCACG
GTGTCAGGATCAAAATGCAGATACTCTACAACCTGTAGCAATCCTGGTCA
TTATTGGACACTCCATGTGTGATGGTTTGGATTTATCCACCTTTGCAAGC
ACGTTCGATTCGCCAACAAAGACATAACTATAAACAATTTCTAACTACGG
AGATGCAAAGTATGACTTCACCAGACAGGAGTTTATTCGCTGAATTTCTA
CGCGGCTTTTCAATTATGGTTGGCAGAGAGATACAGACGCTTCTGATCAT
CGAACAGNTTCACCAGACAGGAGTTTATTCGCTGAATTTCTACGCGGCTT
TTCAATTATGGTTGGCAGAGAGATACAGACGCTTCTGATCATCGAACAGT
TTTACTTTTTACATGAACACTATTACACTGAATCGTCGCTTTTGTTAAAA
GAAATAGATAGTGTCCCAAATACGAGTGTTGTGGTCTGGTGCGTAACCTT
TATTTCTTTATGTCAGCTAAATCATCAATATTATTTTGGTTGGATACCAA
GGAATCgggtcattatttttcaaaacaaaagggCAAACCGTTATGTTCAC
AAAGCTTTATACGATTTGATGATGAACTCCGATTATGATCGATATAAAGA
CTATGGTTCTCTTGATGGACACAGAGCTAGAAGTAGAAAACTTGTTTTGC
GGTTTTCGATTCGTCGACGTTTTTATGCATCCGATCCGCTGTATGATTAC
TTCTTGAGTATTTTCAGCTCATTCTCCAATATTCAGGTGAAGATGTTGAT
TGATATTCATGCCCATAACCGTTCGTTATATGATGGGTTTgccgaatttc
tttttcattctaATAGAAGTAGCAAAATAATGAGCTCTCGTCTTGTTTCG
AAAGTTGAATTCTTGGACATGTTTCTACAACCTGACCCTGGCGTTCTAAA
CATCAATATCATCGAACATCGTACAGGTTCTCAGATCGCCGAACGTGGAT
TTGTTTTTCGCCAGCTGCTTACTCTTCATGTTTTTGACTCCATTAGTGGG
TCACCAAGACTCCGAACTGATGGGTCTTTTATTATTTCTTACGAAGATTT
GTCAAACCCTATGTTCGTTCGTATTTTCATCGCTAGAATCAAAGAAATGA
TGAGTtgaacagattttttttcgatgAAGTGACTATAGAAGTATCTTTTT
GTTTGAAACCGTTTCCTGTCACAAATcactttaag Run BLAST on NCBI transcript from alignment at scaffold_202:411183..412717 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051697 ID=TCONS_00051697|Name=TCONS_00051697|organism=Clytia hemisphaerica|type=transcript|length=1535bp|location=Sequence derived from alignment at scaffold_202:411183..412717 (Clytia hemisphaerica)
cttaaagtgATTTGTGACAGGAAACGGTTTCAAACAAAAAGATACTTCTA
TAGTCACTTcatcgaaaaaaaatctgttcaACTCATCATTTCTTTGATTC
TAGCGATGAAAATACGAACGAACATAGGGTTTGACAAATCTTCGTAAGAA
ATAATAAAAGACCCATCAGTTCGGAGTCTTGGTGACCCACTAATGGAGTC
AAAAACATGAAGAGTAAGCAGCTGGCGAAAAACAAATCCACGTTCGGCGA
TCTGAGAACCTGTACGATGTTCGATGATATTGATGTTTAGAACGCCAGGG
TCAGGTTGTAGAAACATGTCCAAGAATTCAACTTTCGAAACAAGACGAGA
GCTCATTATTTTGCTACTTCTATtagaatgaaaaagaaattcggcAAACC
CATCATATAACGAACGGTTATGGGCATGAATATCAATCAACATCTTCACC
TGAATATTGGAGAATGAGCTGAAAATACTCAAGAAGTAATCATACAGCGG
ATCGGATGCATAAAAACGTCGACGAATCGAAAACCGCAAAACAAGTTTTC
TACTTCTAGCTCTGTGTCCATCAAGAGAACCATAGTCTTTATATCGATCA
TAATCGGAGTTCATCATCAAATCGTATAAAGCTTTGTGAACATAACGGTT
TGcccttttgttttgaaaaataatgacccGATTCCTTGGTATCCAACCAA
AATAATATTGATGATTTAGCTGACATAAAGAAATAAAGGTTACGCACCAG
ACCACAACACTCGTATTTGGGACACTATCTATTTCTTTTAACAAAAGCGA
CGATTCAGTGTAATAGTGTTCATGTAAAAAGTAAAACTGTTCGATGATCA
GAAGCGTCTGTATCTCTCTGCCAACCATAATTGAAAAGCCGCGTAGAAAT
TCAGCGAATAAACTCCTGTCTGGTGAANCTGTTCGATGATCAGAAGCGTC
TGTATCTCTCTGCCAACCATAATTGAAAAGCCGCGTAGAAATTCAGCGAA
TAAACTCCTGTCTGGTGAAGTCATACTTTGCATCTCCGTAGTTAGAAATT
GTTTATAGTTATGTCTTTGTTGGCGAATCGAACGTGCTTGCAAAGGTGGA
TAAATCCAAACCATCACACATGGAGTGTCCAATAATGACCAGGATTGCTA
CAGGTTGTAGAGTATCTGCATTTTGATCCTGACACCGTGATAACTCAGTT
TGAGTATTGAGCACGAGAGTTACATTTCTTATTTCGTCACACGTAAAGAA
TCCTTGTTTAACGTCGTCAAACATTCCCTCCACTGACATCGATGACCAAA
TGAGAGTATTAATGaacatgcaaaaaaaatttagtttcatTTTCGAGCTT
GAAAAGaagcttttttcaaattcatgatacgcaccactgcaatgtcttct
gacattacaccACGGAcaaaacagctgattggttgttagtgacgtaaaat
cagtcaatacgtcactttcaaccaattagCTGTTGGGTCCGAGGAAGACA
TTGCTATGGTGCATGTCATGAATATTCAAATAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051697-exon-scaffold_202-1491911889:411183..412717 | TCONS_00051697-exon-scaffold_202-1491911889:411183..412717 | Clytia hemisphaerica | exon |
| TCONS_00051697-exon-scaffold_202-1510915933:411183..412717 | TCONS_00051697-exon-scaffold_202-1510915933:411183..412717 | Clytia hemisphaerica | exon |
| TCONS_00051697-exon-scaffold_202-1575043694:411183..412717 | TCONS_00051697-exon-scaffold_202-1575043694:411183..412717 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:411183..412717 . |
Blast
The following BLAST results are available for this feature:
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