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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051703 ID=TCONS_00051703|Name=TCONS_00051703|organism=Clytia hemisphaerica|type=transcript|length=993bp
CTCAGGAAAAACGGTGATTAAGCAATTAGAATATTCGATATCGTTCATGA
AACCGAACTTTAAATCTGGTAAATCTCGGTCCATAATTGCCTGGTCTTGG
ACAACTTCAAAGCCAAGCTTTTGATACAAAGGCGTCACTGATGCCTTTTC
ACCTCCTTTCATCAACACAAAGAACTTTGTACCATCGAGCTgcaataatt
tctttttcagaaaaaccatCAGTTGAAAAAGTGCATCTGTGTCTTCCTTG
ATACCAAGACCTTCAAAAGATTCGCTTTCCAGGTTTGATTGAAAATAGAT
AGTTAAATTTTGAATTGTCTTTGGAAAACGGGTTTCCGGTAGAAGCGTGT
TTGAATGATACTCAAATCGATTGAAGTTCGGATTTCTAAGCAATGCTACA
AGACTTTGGAAGCAAATAGAAACACCATTAGGTTCCCGGTTAAATTTGTC
ATCGAACACCTGGGGATAGCTATATGACCTGTACCGGATTATAAAACCTG
GTCCATTAGTGATAAGAACGAAACGATGAACTGGTAACCAGGCAAGCTCA
GGAAAACGAGCTAACATTTCACTGCTGTAACTCCTTACTTTAGTCAAGCA
TCCGATGATAATAGAAACCTTTGGATTTTTGGAAAGCACTTCCAACTCCA
TATAAGAACGTAGCGTGTCGTATTCATTGTATAAATAAAAGACAATTTCT
CTTGTATCATCTGTTATAATTATTTCACCGTAGAATTCGTCAACGAAACT
GTACATTTCATCTTTTTTGAtgggttgaaaattgtttgaaagTTTCTCGA
AGTCCGATCGAATATCTTCAACATCATTGATCTCGATGAATTTACGGTTA
GCCTGGTCGTACAGTCTTCCTTCGTAACATTGATCTTGTAAAACAGTTTT
TATAACCGACACAAGGAAAGGGTATTCATATTTTATATAATAAGAGTCAA
GAGGTAACCAGTTTAAATGAGAGTTTTCTGCATCGACAAAGAC Run BLAST on NCBI protein sequence of TCONS_00051703-protein >TCONS_00051703-protein ID=TCONS_00051703-protein|Name=TCONS_00051703-protein|organism=Clytia hemisphaerica|type=polypeptide|length=331bp
VFVDAENSHLNWLPLDSYYIKYEYPFLVSVIKTVLQDQCYEGRLYDQANR
KFIEINDVEDIRSDFEKLSNNFQPIKKDEMYSFVDEFYGEIIITDDTREI
VFYLYNEYDTLRSYMELEVLSKNPKVSIIIGCLTKVRSYSSEMLARFPEL
AWLPVHRFVLITNGPGFIIRYRSYSYPQVFDDKFNREPNGVSICFQSLVA
LLRNPNFNRFEYHSNTLLPETRFPKTIQNLTIYFQSNLESESFEGLGIKE
DTDALFQLMVFLKKKLLQLDGTKFFVLMKGGEKASVTPLYQKLGFEVVQD
QAIMDRDLPDLKFGFMNDIEYSNCLITVFPE Run BLAST on NCBI transcript from alignment at scaffold_202:541062..542054 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051703 ID=TCONS_00051703|Name=TCONS_00051703|organism=Clytia hemisphaerica|type=transcript|length=993bp|location=Sequence derived from alignment at scaffold_202:541062..542054 (Clytia hemisphaerica)
GTCTTTGTCGATGCAGAAAACTCTCATTTAAACTGGTTACCTCTTGACTC
TTATTATATAAAATATGAATACCCTTTCCTTGTGTCGGTTATAAAAACTG
TTTTACAAGATCAATGTTACGAAGGAAGACTGTACGACCAGGCTAACCGT
AAATTCATCGAGATCAATGATGTTGAAGATATTCGATCGGACTTCGAGAA
ActttcaaacaattttcaacccaTCAAAAAAGATGAAATGTACAGTTTCG
TTGACGAATTCTACGGTGAAATAATTATAACAGATGATACAAGAGAAATT
GTCTTTTATTTATACAATGAATACGACACGCTACGTTCTTATATGGAGTT
GGAAGTGCTTTCCAAAAATCCAAAGGTTTCTATTATCATCGGATGCTTGA
CTAAAGTAAGGAGTTACAGCAGTGAAATGTTAGCTCGTTTTCCTGAGCTT
GCCTGGTTACCAGTTCATCGTTTCGTTCTTATCACTAATGGACCAGGTTT
TATAATCCGGTACAGGTCATATAGCTATCCCCAGGTGTTCGATGACAAAT
TTAACCGGGAACCTAATGGTGTTTCTATTTGCTTCCAAAGTCTTGTAGCA
TTGCTTAGAAATCCGAACTTCAATCGATTTGAGTATCATTCAAACACGCT
TCTACCGGAAACCCGTTTTCCAAAGACAATTCAAAATTTAACTATCTATT
TTCAATCAAACCTGGAAAGCGAATCTTTTGAAGGTCTTGGTATCAAGGAA
GACACAGATGCACTTTTTCAACTGatggtttttctgaaaaagaaattatt
gcAGCTCGATGGTACAAAGTTCTTTGTGTTGATGAAAGGAGGTGAAAAGG
CATCAGTGACGCCTTTGTATCAAAAGCTTGGCTTTGAAGTTGTCCAAGAC
CAGGCAATTATGGACCGAGATTTACCAGATTTAAAGTTCGGTTTCATGAA
CGATATCGAATATTCTAATTGCTTAATCACCGTTTTTCCTGAG Coding sequence (CDS) from alignment at scaffold_202:541062..542054 >TCONS_00051703 ID=TCONS_00051703|Name=TCONS_00051703|organism=Clytia hemisphaerica|type=CDS|length=993bp|location=Sequence derived from alignment at scaffold_202:541062..542054 (Clytia hemisphaerica)
GTCTTTGTCGATGCAGAAAACTCTCATTTAAACTGGTTACCTCTTGACTC
TTATTATATAAAATATGAATACCCTTTCCTTGTGTCGGTTATAAAAACTG
TTTTACAAGATCAATGTTACGAAGGAAGACTGTACGACCAGGCTAACCGT
AAATTCATCGAGATCAATGATGTTGAAGATATTCGATCGGACTTCGAGAA
ActttcaaacaattttcaacccaTCAAAAAAGATGAAATGTACAGTTTCG
TTGACGAATTCTACGGTGAAATAATTATAACAGATGATACAAGAGAAATT
GTCTTTTATTTATACAATGAATACGACACGCTACGTTCTTATATGGAGTT
GGAAGTGCTTTCCAAAAATCCAAAGGTTTCTATTATCATCGGATGCTTGA
CTAAAGTAAGGAGTTACAGCAGTGAAATGTTAGCTCGTTTTCCTGAGCTT
GCCTGGTTACCAGTTCATCGTTTCGTTCTTATCACTAATGGACCAGGTTT
TATAATCCGGTACAGGTCATATAGCTATCCCCAGGTGTTCGATGACAAAT
TTAACCGGGAACCTAATGGTGTTTCTATTTGCTTCCAAAGTCTTGTAGCA
TTGCTTAGAAATCCGAACTTCAATCGATTTGAGTATCATTCAAACACGCT
TCTACCGGAAACCCGTTTTCCAAAGACAATTCAAAATTTAACTATCTATT
TTCAATCAAACCTGGAAAGCGAATCTTTTGAAGGTCTTGGTATCAAGGAA
GACACAGATGCACTTTTTCAACTGatggtttttctgaaaaagaaattatt
gcAGCTCGATGGTACAAAGTTCTTTGTGTTGATGAAAGGAGGTGAAAAGG
CATCAGTGACGCCTTTGTATCAAAAGCTTGGCTTTGAAGTTGTCCAAGAC
CAGGCAATTATGGACCGAGATTTACCAGATTTAAAGTTCGGTTTCATGAA
CGATATCGAATATTCTAATTGCTTAATCACCGTTTTTCCTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051703-exon-scaffold_202-1491911889:541062..542054 | TCONS_00051703-exon-scaffold_202-1491911889:541062..542054 | Clytia hemisphaerica | exon |
| TCONS_00051703-exon-scaffold_202-1510915933:541062..542054 | TCONS_00051703-exon-scaffold_202-1510915933:541062..542054 | Clytia hemisphaerica | exon |
| TCONS_00051703-exon-scaffold_202-1575043694:541062..542054 | TCONS_00051703-exon-scaffold_202-1575043694:541062..542054 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:541062..542054 . |
Blast
The following BLAST results are available for this feature:
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