TCONS_00051734 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00051734
Unique Name	TCONS_00051734
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	909

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_203:128413..145703-

transcript sequence

>TCONS_00051734 ID=TCONS_00051734|Name=TCONS_00051734|organism=Clytia hemisphaerica|type=transcript|length=909bp
TTTGAGTGTAAGGTGTTCAGGCTGAACTCAACTGTACGACTTTGAATGGT
GgcagaaaatcaaaattcaaaaaaacacgACAGGACGAGTCAACTTTATT
CCAGATTTACTTTTTCCTAAGTATGATTCCAGTAAAAGAACTACAATACT
CAGAAAAATATGATGATGGGGAGTATGAGTATAGGCACGTTATAATTCCA
AGAAAATATGTGAAGCTAGTTCCACAAAATCATCTGATGACAGAAACAGA
ATGGAGAAATTTGGGAATTCTACAATCACCGGGATGGAAACATTATCTCC
TTCATTCACCAGaaCCACATATTTTGTTATTCAAACGTAAACTAACAAAC
ACTGTACCACTTGGAAATGCTACCAATCGAGCACCGCCTCAAATGGAGGT
CTAATCTGCAGTTTCAATTTGAGTGGAACAAAAGAGTGGATTCGACTAGG
AGTTGTTTTATTGGTCAAGGAAAGAAGATTTTAACCCTCTACTAACTTAC
TAACTTATAGTTATAGGATGGCAAATAAGGGGGAAAGACCGGTGTCTAAC
CAGGAACATCATAAttaaagagaaaagtttgcagCCTGGATATCAAGGTG
AGggaaaatttcaccatccacTTTTGACTGTGGAAAATTTACTTTagaaa
atttgcaattttcccCGACCTTTGATTTCCATTTAACTTAATTTTTGGAC
AAATAATGAGCCCTGTTTGGAAGTGGCTCTATCGGGcgttatcattgttt
ttttgaaaCTACTTTCAACATAGAGATccttattgtaaagtttttcgaGT
AATGTTTTACATATATTAGACTTTCATAATTTTGTTttaactgtacataa
aaatgaaacttttatgAAAAGCGTTAAATCTTTAAGCAAATTAATTGCTT
CAAGCTATA

Run BLAST on NCBI

transcript from alignment at scaffold_203:128413..145703-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00051734 ID=TCONS_00051734|Name=TCONS_00051734|organism=Clytia hemisphaerica|type=transcript|length=17291bp|location=Sequence derived from alignment at scaffold_203:128413..145703- (Clytia hemisphaerica)
TTTGAGTGTAAGGTGTTCAGGCTGAACTCAACTGTACGACTTTGAATGGT
GGCAGAAAATCAAAATTCAAAAAAACACGACAGGACGAGTCAACTTTATT
CCAGATTTACTTTTTCCTAAGTATGATTCCAGTAAAAGAACTACAATACT
CAGAAAAATATGATGATGGGGAGTATGAGTATAGGTTTGTATTCATTGTT
TTAGTTAATTATCTTCATACAAGGGAATCTCAATCTAGCCCAGTTTGCAT
CAATTGTAAAAGGGGTTACGCACGATACGAAAATCTCGTGTTCGCAAGCG
AAAGGTTTTTTACACTATATACCGTAGGTTTGCTAAACTTCCTTATATTC
CCAGCGAAACTTTCCGATTGCTAGTGTACAACGGAAAAGGACCAAAACGC
CACAAAAGTAGATTTAACACGATTTCTGCCGGAGACGCCTAGAAGCGAAA
AGATCCCGGAGATAGGGCAGGTATGTTTTCCCAGGAATGAGAAAGTTAGC
CATTTTTTACGATACAATTTTAAAAAGTAGTACCCAGCCGTTTGCGTGAT
GCGTGATCGGGAAATAATTAGAGGCATGATTTGGGCTATTTTCGCGATAC
TTGCGTGGTGAACAAACCTTTTTTGGTAATTTTCATGATTGTCACGAGAG
CAAGGAAAATTTCTATCAATGCATTTCAAACATGTAAAAACTCTGGTGAA
CCAAAAGAAAGTTGATATTCTATTTTCAAAACAAACTGCTTTTTTTCAAC
TCAAATATCTTAAAATTTCGACCTAAAATGAGAACATCATAAGGATTTTT
TGAGAAAAAAAAATGTCTTATGATACTTTGTGCAAAGTAACGGAATTTCG
TTCCGTCTTTTTCTCTTTTCTCTTTTTCTTAAATCAGGGGGCAATGTATA
TCTACAAAAATTGATCTTGTTTATCAAAAATTGAGAATATTTTACAATAA
GAAAACCAAAGGAAAATTTATATTTTCAAAATAGATGAAATATTTTGCAT
ATACTTTCATATATAAAATATTGGAAAAAAGGTTTAATATATATATAAAA
TATTGGAGAAAAGGTAAAATATATAAAATATTGAAAAAAAGGTAAAAAAT
TCGGTTGGTTCGAAACGCAGGAGACAGGACGCAGGAGACAGGACACAGGA
CGCAGGACACAGGACGCAGGTCATACAAACTACAGACCGGAAAATTGTAA
CATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GTCACATGTCAATGACATTGAAAAGATAACTGCTACTATACATGCGTGAT
TTATGTGTAATATATAATACAAGTATTACAGGTCCGTGTTATACACGGCA
CAGAATGCAAAAGCACGTGGCAAGTATGTGGATAGATTTTGACCTTTAAA
AAGGTTCTATACCAATGAAATACCTTCATAATGATATTTCTAACAATTAC
AAGTGTTTTTCAAACATTTTCTTTGTCTTTTACAGCAATTAAAGCTGACC
TGTCAGCACTGTCCTGTGTCCTGTGTCCTGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AAAATTATAGCATCCAAAAGTTATATTTTTTGAAATGCATGCCAAAAAGT
AAAAAACTTTCAAAACAGGGAAACAATTTCATAATTTCCAACATACACTT
TGTTGAATATAAGAACAATTTTATAAGAACAATGCTGAGCCTGAAAACTA
CTCAATTTCAAGCAATATAGGGGTCAAAGTAATAAAAATTGGGTATAATG
CCTAAAATACCTCACTTACATCCTATTAATAAGAATATGATAGAGGCTCA
AAAGTGCAAAAAAAAAAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTTTACTGGTTCTTATATT
AAAAAAAGTGTAATGCAAAAGAAGAAAAAACAAATCTCATATATACTGGG
AAACATTTTCATAATCTGAAAGAACGTAGAAAGGAAAAAATTCCCCTAGT
AGAAGGCATTTTATAATTTTCAAAAGCATGCTGCAAAAGCAAAAAATGTC
ACATACTGTAATTGGCAATCATAATTTCCAAAAATATCAAAAAGAAAAAA
AGTCGTCATGTCGGATATTGCTTAAAAAAATTTTCAATTGAGGCGAAAAT
AAAAAAAAGTAGTGTTTTCGGAAACCAGCCGGGTGAAAAATAATAATTTT
CTGATCCGTTCGCAGACTATGGGTTCATCAATCTGTAGTTCATTATAAAA
ATAATCAAGTTGGATTTGTGAAGATTTGTTTGTTAGTAATTGATACATTA
TGGTATATTCAGGGCTTACTTCTTACTGTTTGTACATAAAAGTTATCTTT
AAAGTTCTATTTCAATGATCTTATTACTTAAAAAAGTTATCAAAAAAATC
AAATAAAATTTTTTTTTCTGGCCGGCCGCATGAAAGCTTTTTTCCTTCAC
CCGCATTCCGGAAACACTACATTTTTTTATTTTTGCCTTACACAACCAAA
GATTTTCCACGTTTAAAATGCACGTGAAAAAAAATGTCCACAGCAAAAAT
TTCCACGTTTTAAACGCACGTGCAAGAAAATGTCCAAATTCACAACCAAA
AGCTTTCCACGTTTTAAACACACGTGGAAGAAAATGTCCAAATTCACAGC
AAAAATTTCCACGTTTTAAACGCACGTGGAAGAAGATGTCCACAGCAAAA
ATTTCCACGTTTTAAACACACGACGCAAGAAAATGTCCAAATTCACAACC
AAAAGTTTTCCACGTTTAAAATGCATTTTAAAACACCAAGGGAAATCAAT
CATCAATGTACTGTATCAATCAGTAAATTTTGCTCGGGGTTTAAATTTTT
ACATTATTAAGCTAACCAGTTCATATCCAACCACAACCATTTCCTTGGCT
TGGCTTGGGTGCCGCATATCTATACCATCATCTGACCATCATAAAAAAGT
GAGTTCAAACTTTTTTGATGTTGCAAGTATTACATTTTTCCAATATAGCA
TGGTCAGATTTATCCACAAATATTCAGTCACTGTTAGAATTTGTGTAAAT
ATACGGGCAAAATGAAAGTTGATAAAATGTCCTGTTTTTCAAGAGATTGC
ATCAATCTAATCTCTCATGCCAAACCAAACGAAACATCAAATCCAGGAAG
GAATAATAAGAAAACTTCATCATCAACCATTTCTTGTAATAATCACACAA
AAATCATGATCCAATTCAGCTCATTAAAGCATAGAAACCAAAGAAAAATA
GCGAAAGAGCAGTAGCAACCAGTTGTTTATTTTTGCCGCCATCTTTGTTT
TGACTGTTAAAAAGCAGTATGGTCCGATCAACAANTTAAGTACCATACTA
AAGCGAATAAAATCTAATACAATTGAATCAATCGAACGTAATCGAATACA
ATCGAACGTAATCGAAGCAATCGAACGGCAAATCCTGGGTAATATTCGAT
TGCCACTNTGTTTTGACTGTTAAAAAGCAGTATGGTCCGATCAACAATAC
GCTTCCGAACCGGGCGACGTTTCCCGATCGAGAAGGATACTTATATTTTC
CCCCGACGTTTCTCGAAGAAATGACGTCTTCATCGTCGTATNTTGCGTTC
GACAATCGAATTGCAATTATTCGATTGCGTTCAATTGCGTTCGATTGATT
CGGCGTTCGATTCGTTCGATTGACACCGTCTGGCAATATGCATTATGTTA
CGACCCTGCCTATGCCCCGGACAGTCCGGGGCAAATGTCTAGGGTCTGAA
AAAAATAACTTTTTCCCCGGACCTATGTCCGGGGCTCCAATTTTTGCGCC
ATAAATTTACCCCGGACGTATATCGCCGAGCACACTTTAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAA
AAATCGATTTTATCACTCCGCATATCAGCTTTTTTTTCCCGCGCTTTTGC
CAAAAGAATCGCACTCGCTCGCTGCGCTCGCTCGTGCGTAATTATGCAAT
ATCCAGACGGTGTCAATCGAACAACTTCGAACAAAAATCGCAATCGAGCC
AATCGAACGTAATCGAACGCGATCGAATAATTGCGATTCGATTGTCGAAC
GTAATCGAATCTCAATCGAACGGCCGATTCCTGGGTAATACCGTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNAAAAAACCCCGGACTGTCCGGGGCATAGGCAGG
GTCGTATTATGTTTTATGCATTTTGAACCTGCCGGTGTGTCGTGGCACAC
AACACGTTTGCTGCTCAAGATCTCGAGTGCACAACTCTGAAAAAGACGAG
TGCAGGTGCAAAATTTATAGTTTTCAGGTGCAAGAGTACAGAGTTCCGCT
ATTTTCTCTTAGCCCTGGCAATTCAGCTTTTTTTGCTGCGGCAATCATAC
TCTTTATCAAATTTGCTGAGGCAAAACAGCATTTTGCCGCGGCATTTTTT
TGTTTATTGAATTTTGACTTGAGAAACTCCCATACAGCCTATGTCATCCA
AAGTACTAGACGTCTCCTATATTATCAGAAAACAAAGAACGATTTGGCAC
TTTTGAAGTTTCTTTGATTTTATTAACATTTGTCAGAAAATTTACCGTGG
CAAACAAGGAATAATCAAATTTACGGCAGCTTTTACCGTGGCATTTGCCT
CGTGCCGCAGCCAATTGCAAGGATGGACTTACTTTTGGATACTTTTGGAT
GTATTTGAGCGTACCGCTCTTTGATCCACACCACAATCTTCATTCAATCC
ACAATTCCTGAAGGAAAAAATGGATCAGCAGAGAGATTTCATGTCTAAAA
TTGAGTTTGAGTCAACTCTCCTGCACCCTGTATAACCACAGATTTGGGGT
TCATCAGGAATTTTTTGCAAGTGTTTGTCAAGTGCATTTTTGAATTTGTC
AACAGTTAAGGGGCCGTCGACAAACGATTTTCCTTTTTTTTAACGGCTTC
TGGCCGTAAGGGGTGGGAGGGGGTCACTGCAATGCAGTTAAAAAAGTTTT
TAAAAAAGGGAAAGTCTCACTTACAAATTTCATCAGTCCAAAAAGTAGAA
AAATGTGAAGAAAGGCTAATTGCTAAGACCAAAGCAACCACACAACATTC
ACCTTATTCCCGATCACCAATTAAATGCTTCAACAAGAAAAATGACTGGT
CACGTGACGAAAGTCAGCAATTTTTCCCTCCCCNCACCAATTAATGCTTT
GACAAGAAAAATGACTGGTCACGTGACGAAAGTCGGCAATTTTTCCCTCC
GCCTCGTTGACTCCTTGCTCCACCCATCCCGCCCTGACTTGCTGCGGGGC
TTGGAGTTTCAAAATTAGAAGGTCACGGCTCAAAACCACATGTTTATTTC
GTGCGAAAAGAAGAACTTTGAGGATTACGAATCGAAAGAACATGGCGGCC
ATGGACCAGTGAAAGTATTTACTTTTGAAGAATTCTTTTGGCCGCTAAGA
CGTAGGGGGGAGGGGGTCTAAACCTTAACGGCCTCAGGCCATTAAAAAAA
AGGAAAGTCGTTTGTTGACGGCCCCTAAATTTTTCAAGTTTCTACTGCTC
TTTGGCATTGTATTGAAAAGTTTTGCTCCTTGCATAGTCAGGGTACTGTC
ACGTAATTTTGAATTGTTTGGACCAGCTTATTTGTTAAAACACATTCGTC
CTAATCTTGTATGGTCTTTAGATTTGAAGCAATCATTGATATTTGGCACA
AGATTTTCCAATATTTTCCAGGTGTATATGATCCTGTAGCGTTCTCTCCT
TCTTTGAAGTGAGTATATTTTAAGCTTCTTTAGACTTTCCCAATAATTTT
GGTGTGTTCCTTTTATTTGTTTTAAAAATGATTTCTGGAACTCTGCAAGT
CTTTGAATAAGACTAATAGTACTGGGGTTCCATAACGCTGAGCAATAAAC
CAGTATAGGGATCACAAGTTATTTATAGAGAGTGATCATGGTATGTGTAG
AGCGGGAAGTGAATGTTCGTAATATCCATGAAATGATGTTTTTGGCTTTT
TCAATTATTAATTGATTCAATTTGATGTTTAAATACTTGACGATGGATTG
GACAACATTCTCATCTATGTCTCCAATGAGTATCAGGAAAATCAGGGGTC
CAAGTACACTTCCTTATGGAACACCTGAGATAACTTCTTGATTGTTTGAT
TTCACACCATAAACCACTACAATTTGTTGCCTGTCTCTCAAAAAGGACTC
TATCCAATTATAGATTTTACCAGTTATTCCTAGCCTTTTGAGTTTTGACA
GAACAGTTGAATGATCCACTTTATCGAAAGCTTTAGAAAAGTCTAAGTAA
ACAACATCTACATTGGTCTCTTTGTCAATTAAGTTTAATATAAGATGGAT
TAGCTGGACTGAAGTACAGCTAATTTTAGCAATTTTTTGCCTATTTGGCA
TGGGTGTCAATTTCCAAATTATAGGTGCACCTTGTCCATGCATATTTTGT
CCCAGGCGTAGTTAATCGATATAATCGATAATCTTGAGTAATTGATAAAT
AATCGTTAAGTAATCGATGGATTAGATATCGATTAACCGATAGAATCGAT
AGGTAATCAGACCTTCAAAAAATCGATTATTTCCAAGCTATCGATTACTT
ATCGATCACATATCGACTACATACCGTGAGATTGGGTAACTTGCATCAAT
GGAGAGGCTAACATGCATAGCCCTCAAATGAAAGACCTGGCTGGTCATTT
AAATACAAAGTTAAATCAAAACAAAAATGGTAGAGTAAAGATGCGAGCGG
AGCTGCGTAGTTGTATTTTAATGACCAGCCAGGTCATTCATTTGAGGGCT
ATGCATGTTAGCCTCCACTGATGCAAGTTACCCAATCTCACGGTACAACC
TATCGATTACTTATCAATCATGTATCGATTGTTAACAATCATCGATTACT
TATCGCTCATGCATTGATTACTTATCAATTATTTACTTATCTTTGATCAC
GTATCGTTATCGATTATATATCGATCGTGACCGACTATTGACTACATTAC
CGGCCCTTTTTACACCAGCCCTTATTCCACCAACGAGCCCAAAAATAACG
CTAATAATAAGGTCCAAATTTAATCTCGCGACGGTGAAAGTTAATCCAAT
TAAAGTACCACTCCCTAAAATCTGATAAATAATCGATCACGAATCGATAG
TTGATCGATTAACTGTTTGATTGATGATTAATCAATTTTTGATCGATATG
CAATCGATCAAAAGCTGTGATAGATAGCCGATCAATTTTTAATCGATACT
TAATTTAGTCGAAGTATAATCGATCTATTGAAAAAATCTTGAGTATCGAT
TATCAAGTATCTATCGGTTAATCGATATCTAATCCATCGATTACTTATCG
ATTATTTATCAATTACTCAAGATGATTATCGATTATATCGATTAACTATG
CCTGGTTTGTCAGTGCCGTGCATATTTTGTCAACATCCTTTTCATTGGAT
AAATACCACTGAAATATACAAGATAAGTAAACATAAATTTATCGCACGCG
AGCACGACTTAGCTAAGCGCACCTCTATATACATTCATTATCTAAGAATT
GAAGCGGGCAAAGATTACCGCGCAGGCTTATGGTCGACAAAGGTTATTGA
AGTTATTGAAGATATTTTCCAAGGTACGGTCAACTGCTCTAACTTGGAAC
TATCTGACAAAACATGGGACGTCAATTTGGCCACCATTACACCACCATTT
TACCGAAACCTCTAAAGTCATTTGATTTGACACGCGCCCTGTTGCTAAGA
CCTTTGCTTGAAATCAAAAGTGAAACCAAAATAATTTAGCACACACTGCC
GTTCGGGTAGTATAGTATCGATAAAGTAAGGGAAGCCCTGACTGGATAGA
AAGTATGATTGATAAACTTGGTGGAGTTATCAAAACAAATTTGTTGTCAA
AGAGATTAACAGTAAGTGAAAATACAGGCCTGATATCAACAGTCCCATGT
TTCGACCAACTGTCCCAAGTTAGAGCAGTTGACGGTAGACCTTTGGCTAG
CTAGGCATTTTTCATCATTGAAAAAATATCTGTTTTCTTGTTCAAAAGTT
GCCAAAAAGAGCAATAATTGATGTTTTGGCAAACACGATGGTCTTTTGAA
TAACTAATTACTCCCCATACATTACTTTCCCTCAGCCAATAAAAACATGA
TAAATTATCTTGTCTCTATTATTAAAAAGACCGCCGCGTTCGCTAAAACA
ACTATTGCCGTTCTTTATCTTTAATCACTGCCCAAATTTGGGCCGAAAAG
TACCTAAAAATGGGGCTTTTTGGACTGTGAAATCGCTTCATTAGTTTTTT
CTGATTTTTTGCATAAAGATAAAGGGCAAGGTTCTCTAAAAAGTGGGTCA
AGTAGTTTTTTTCAGAAAATTTTTTTTGGCAGTAAAAATCAGATTTTCGT
ATTTTGGGGAGATTCCCTTTTGCCATATCTGACATCACAAGTGATTTGAA
GAACGTTCTACACTTTTTTACTCTCTTGTTATTGGACCTACCCCGGTGGA
GGTCCTATAAATTAACCTTTGTCCGTTCGTTCGTTCGTTCGTTNNNNNNN
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AATTTCAAAAGAAGACATTTCATTTCAAATTGTTTTTTCGTTTTAGGTAG
GGGGCTCTCTATTTAGAATTTGGATCGAGGCTTAATCTCAGGGGTGCTGA
ACCTTCAGGGGGGGATTCGACCCCTCTGCACTCTATGAGTTTCTAACTTT
CCTGTGGGCGTGATTTGGCGTTCTGTCATCGCAAAATATTTTTTATGAAA
ATTTACCATATTTCAACCCTAATATAATCTAGATAGAGGACAAATATTAA
CCTCGATTCTCTTTTGGTTGTATTTTGCAATTTCACAATTTCACGATAAA
AAGAACTATTTAGAAATTATTTCCTTTAACAGAAGTTGAATCAACATTGA
AATATTTAAAGAAGTCGTACTTTATGCGTACAAACTCTCACAAATTTCGC
GAAATCTTAGTTTTATGAAATTTTAGTTTATGCACCGAAAACGTGAATTT
TCTACATTTGCGAAAGTTTATGCTTGCGAAAAATTATTTTTTGTCATCGC
GAAAGTAAATGTCATAGATTTCGCATATTTTTTCGGCTGAAGTTTTTGAT
TATTCAGCATGGCTTTGTTTTATGATGTGAAATCAAGTGCGTTTTACTTA
TGGGTAATGAATCAACGGATCTTGCACTAATGTACTTCCCAGTTTTCTCA
AAGGTAACGAATCGAGTGGGGATTGAACCCACGATCATTTGTTTTATGTT
TTTCCACTACGAACTTCATCATCATTTCCTGTCTCATTTTAGGCACGTTA
TAATTCCAAGAAAATATGTGAAGCTAGTTCCACAAAATCATCTGATGACA
GAAACAGAATGGAGAAATTTGGGAATTCTACAATCACCGGGATGGAAACA
TTATCTCCTTCATTCACCAGGTATGATGATGAGATTTTATTCATCCTGTA
CATCATTTTTGCAGCACTTACCAAATCTTGATACCTTATCGGGGAAAAAA
ATGTTGGAGTTTCAATTAGTTGGGGAAAAATTTCCTCACCCCCTCAAAAA
TTTTGTCACTTTCCCCCGACATTTTTTCCCCGATAAGATAACTCGAATAT
ATATCATGACCTAAAACTTGGATAGATGCAGGCTTATCTGCTCACAGCTA
GCCCTAATTGAAGTGACATAATTTTCTTTTTACAGAACCACATATTTTGT
TATTCAAACGTAAACTAACAAACACTGTACCACTTGGAAATGCTACCAAT
CGAGCACCGCCTCAAATGGAGGTCTAATCTGCAGTTTCAATTTGAGTGGA
ACAAAAGAGTGGATTCGACTAGGAGTTGTTTTATTGGTCAAGGAAAGAAG
ATTTTAACCCTCTACTAACTTACTAACTTATAGTTATAGGATGGCAAATA
AGGTTATTTTTAAAGAGTTTATATTGTACATTGAGAGCCATGTTTTTACG
ATTTTATTTTCTTAACACTTGTATCGAACACTTTGGATTTGCAACATATA
AGTATTATAGATATTTGATAGATTGTCAATATATACGATGTGAGTACACC
AAAGGGTATTAAAGGTGAAAATATAGCCGGAATATTTATGATCAGGAAAG
ATTTTATTTAGGGGGAAAGACCGGTGTCTAACCAGGAACATCATAATTAA
AGAGAAAAGTTTGCAGCCTGGATATCAAGGTGAGGGAAAATTTCACCATC
CACTTTTGACTGTGGAAAATTTACTTTAGAAAATTTGCAATTTTCCCCGA
CCTTTGATTTCCATTTAACTTAATTTTTGGACAAATAATGAGCCCTGTTT
GGAAGTGGCTCTATCGGGCGTTATCATTGTTTTTTTGAAACTACTTTCAA
CATAGAGATCCTTATTGTAAAGTTTTTCGAGTAATGTTTTACATATATTA
GACTTTCATAATTTTGTTTTAACTGTACATAAAAATGAAACTTTTATGAA
AAGCGTTAAATCTTTAAGCAAATTAATTGCTTCAAGCTATA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_032755	XLOC_032755	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00051734-exon-scaffold_203-1575043694:145520..145703	TCONS_00051734-exon-scaffold_203-1575043694:145520..145703	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1575043694:129484..129611	TCONS_00051734-exon-scaffold_203-1575043694:129484..129611	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1575043694:129002..129218	TCONS_00051734-exon-scaffold_203-1575043694:129002..129218	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1575043694:128413..128792	TCONS_00051734-exon-scaffold_203-1575043694:128413..128792	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1510915933:145520..145703	TCONS_00051734-exon-scaffold_203-1510915933:145520..145703	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1510915933:129484..129611	TCONS_00051734-exon-scaffold_203-1510915933:129484..129611	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1510915933:129002..129218	TCONS_00051734-exon-scaffold_203-1510915933:129002..129218	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1510915933:128413..128792	TCONS_00051734-exon-scaffold_203-1510915933:128413..128792	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1491911889:145520..145703	TCONS_00051734-exon-scaffold_203-1491911889:145520..145703	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1491911889:129484..129611	TCONS_00051734-exon-scaffold_203-1491911889:129484..129611	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1491911889:129002..129218	TCONS_00051734-exon-scaffold_203-1491911889:129002..129218	Clytia hemisphaerica	exon
TCONS_00051734-exon-scaffold_203-1491911889:128413..128792	TCONS_00051734-exon-scaffold_203-1491911889:128413..128792	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_203	supercontig	scaffold_203:128413..145703 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00361709	1.26593	0.390623	0.402848	0.729254	9.25546e-10	0	0	8.67071	8.83931	6.15007	9.82486	7.15542	9.8359	7.96502	10.5495	17.8341	11.2907	3.80682	3.66951	1.33746e-07	1.79641	0.00012688	1.05571	6.13082	0	5.53528	1.21921	0	3.74448

Blast

[Close]

BLAST of TCONS_00051734 vs. Swiss-Prot (Human)
Match: CKS1 (Cyclin-dependent kinases regulatory subunit 1 OS=Homo sapiens GN=CKS1B PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.731e-28
Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 3

Query:  135 KELQYSEKYDDGEYEYRHVIIPRKYVKLVPQNHLMTETEWRNLGILQSPGWKHYLLHSPEPHILLFKRKL 344
            K++ YS+KYDD E+EYRHV++P+   KLVP+ HLM+E+EWRNLG+ QS GW HY++H PEPHILLF+R L
Sbjct:    4 KQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 73

The following BLAST results are available for this feature:

BLAST of TCONS_00051734 vs. Swiss-Prot (Human)

BLAST of TCONS_00051734 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CKS1	6.731e-28	64.29	Cyclin-dependent kinases regulatory subunit 1 OS=H...	[more]

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TCONS_00051734 (transcript) - C. hemisphaerica