TCONS_00051753 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051753
Unique NameTCONS_00051753
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2457

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051753 ID=TCONS_00051753|Name=TCONS_00051753|organism=Clytia hemisphaerica|type=transcript|length=2457bp
TTCACAACCAAAATAATATTCATATGCTTTCTTTCACTAGCCTCTCGCAA
TCATTCTGGCAAAGGTTTGAAGCAGAAAACCCTGATATTTCTCTGAAACG
ACAAGGCACGGTTTCCATCAATAGAGCACTAAATTGTACGAGAGAGATGG
CTGAGGTGCATCTAGACGACCTGGCCGAAGAGTTAATTTCGTGCGAGATC
TTTAAAAATGCTGAGAAAGTTGAACCTGGAGTATGGACAGGAGATATCGA
TACTTCAAGGGTATTTAACCACGATGAAACACCGCAGTTTGTTAACTATG
GAGTCGATGCTACTCAATCTGGTTTGGCATACGCCGCTCGCGGAGAATCA
TGCAAAAAGATGATGCGGGAGAATCGTGAATCTGTGACCATTTGTCCAGT
TGTTTCATTAGCAGgagAAATGGCTGTCTCTCAGGTATTGTTCTCTGGAA
AAGGCATAACAACACATATGTGCCCGAAGCCAGTTGCAAAGAAGATCAAC
AATCTCTTGATATCTTCCACTGAAAAAGGCAGTCAAGACAACAAATCTCT
CCTTGAATGTTACCGCTTATTTGATAAGTATCTTGACGAAAAGAAAATTC
AACGACCAGTAGTTATGTTGGCTGATGGGCATAGCTCAAGATTTGATTAT
AAAGTATTAAAGTTCCTCAGGGAACATAAAATTAATTTGTTCATATCGCC
ACCAGATACAACTGGGGTGACACAGTTACTCGACCAACATCCAAATCAAA
GTTTGCATAAAGAATACAACAGTAAAAGAGACGAACTTTTCCCTGGCTTT
CAAACGATCAACCGAGAAGGTTTTATGAACATCTTAGGAGAGATATGGGA
AAAATGGGCTACGGAGGAAACAATACTGAAAGCTGCTAAACGAGTTGGTA
TCTCCAAAGATGGGCTTAATGTTGAAGATATGCAACAAGATAAATTCGAA
CAAGCGGCCCTCATTATGAATAAAGACAAGGATATAGAAAAGCCTGGACC
GAGTACACCGAATAAAAGATGCACCCGTACTTCGGCTAGAGCTACTTTAG
GATCATCTGCCGAGACACCAAGCACCCCTAAATCAATGTCGAAGCTCGCA
CAATCAAAGTACAAATACGGTTCTGTTGAATATTGGAAATGCATGTGTGA
GCAGTACCAAGGAATAATCAAAGATGGCTACGAAAAAAGCTTGAAATTAG
AAGAAATACCTGGATTGTTATCAATCAAAAAAGTCAAACCCAAGGAATTA
GAGAAAACGAAAAACATCCGAATCACCAACGTACATGGCAGCATGGAAGC
TCAAGACATCTTAAGCAGAGTGGAAGCGATTGAAAAAGAAAAGCAGAAAA
AGGAACAGCAAAAGGAAGAAAAACTACAGCAGAAAAATTGGGAAAAAGAA
GCATTTTTCAGATGCAAGAAAAATTGTGTCTGTTCTGACGGTGAATGTGA
AGCTAAGGGACTCAAGCAGTGCCCAGTTTGTTTTGAGGTGAAAAGGTCAG
TTTGCAGCAAAAATAAATGTCAGGTCAATGGAAAGAAACCAATCATGATA
ACACTGCCAAAGGGAGAAGTTTTCAAAGATAATAAACGGAAGCTCAGTAC
CGAGTCTGAGTATGAAAGTGACTTTACTAGTGATGAAAACGAATTCGAAG
ATGTTTTTGAAGATGCTGAAACCTCTTCTAAAGATGAGGAGACAGCTACA
AATGAAAAGGTTTCAGCTAAGCTTCTTGACACATGGAAAAAGCTTTGTCC
ACCAACAAAAGAAGATGATGTTCTTAAAAAGTGGTACGTTGGGGTACGTT
CAACAAAAAAATCCAATCAATTATGTATTGGTCGTTTAGAAATGAGATTT
CTAGATGATGTCGATGGAAAGGTTGTCTCCGTTATCCTAAAATGCTTAAA
CCCCAAACTCGGGAAAGGAACAATGATGGACGAAGCTCCTGAAAATGCAG
ATGCATTCCTATTTCAGATTGAGGATATAATAGATGGTCCAATAAAAGCT
GTTCCTCGACGTAACCTAAAATGGAATATTCCTGATTATAAGGAGATTCG
TGATCATTTTGAGAATGCTGTAAAAATTGATAGGCTATCTCTAAAAAACA
TGTCATTTTAGTTTATAGATTTATTTTGATTTATGATTTTTGATGTTGAT
TTAGTTGAATTTTTTTGTGTCTCATGTCATTTGAATGATTAAAATATGAC
AAAGTTGATTTTAAAGTTAATTGCTCAAATCACTTTTTTTTGGCTGGTAC
ACCTCAAAAACTACAAAAATTTGATAACAATTGGAGGTCTAATTACTTTC
TTTGACGACTATCTATTAAAAAGACAATGATTTTTCCATATCTACAGTAA
GTATAGGTATCTAAAAAGTATAGGTTTTCTGACCTTAAATTCAATTGCCT
GGTCTGTAAGGCCAAAAAACCTGATTTTTTAAAGCAAATTATGATAAAAT
TTTGAAT
Run BLAST on NCBI

protein sequence of TCONS_00051753-protein

>TCONS_00051753-protein ID=TCONS_00051753-protein|Name=TCONS_00051753-protein|organism=Clytia hemisphaerica|type=polypeptide|length=702bp
HNQNNIHMLSFTSLSQSFWQRFEAENPDISLKRQGTVSINRALNCTREMA
EVHLDDLAEELISCEIFKNAEKVEPGVWTGDIDTSRVFNHDETPQFVNYG
VDATQSGLAYAARGESCKKMMRENRESVTICPVVSLAGEMAVSQVLFSGK
GITTHMCPKPVAKKINNLLISSTEKGSQDNKSLLECYRLFDKYLDEKKIQ
RPVVMLADGHSSRFDYKVLKFLREHKINLFISPPDTTGVTQLLDQHPNQS
LHKEYNSKRDELFPGFQTINREGFMNILGEIWEKWATEETILKAAKRVGI
SKDGLNVEDMQQDKFEQAALIMNKDKDIEKPGPSTPNKRCTRTSARATLG
SSAETPSTPKSMSKLAQSKYKYGSVEYWKCMCEQYQGIIKDGYEKSLKLE
EIPGLLSIKKVKPKELEKTKNIRITNVHGSMEAQDILSRVEAIEKEKQKK
EQQKEEKLQQKNWEKEAFFRCKKNCVCSDGECEAKGLKQCPVCFEVKRSV
CSKNKCQVNGKKPIMITLPKGEVFKDNKRKLSTESEYESDFTSDENEFED
VFEDAETSSKDEETATNEKVSAKLLDTWKKLCPPTKEDDVLKKWYVGVRS
TKKSNQLCIGRLEMRFLDDVDGKVVSVILKCLNPKLGKGTMMDEAPENAD
AFLFQIEDIIDGPIKAVPRRNLKWNIPDYKEIRDHFENAVKIDRLSLKNM
SF
Run BLAST on NCBI

transcript from alignment at scaffold_204:217148..219856+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051753 ID=TCONS_00051753|Name=TCONS_00051753|organism=Clytia hemisphaerica|type=transcript|length=2709bp|location=Sequence derived from alignment at scaffold_204:217148..219856+ (Clytia hemisphaerica)
TTCACAACCAAAATAATATTCATATGCTTTCTTTCACTAGCCTCTCGCAA TCATTCTGGCAAAGGTTTGAAGCAGAAAACCCTGATATTTCTCTGAAACG ACAAGGCACGGTTTCCATCAATAGAGCACTAAATTGTACGAGAGAGATGG CTGAGGTGCATCTAGGTAATTACAATTTCACGCATTTTAAAACTGATGGT AATGCAACGTCTCAACCTTGttttaaaacattaaatttaGGTCAAATTTT GAGCGCAGTAGGCATCAATTAATACTCTGTTTAATTTTTCTCTTATGTAG ACGACCTGGCCGAAGAGTTAATTTCGTGCGAGATCTTTAAAAATGCTGAG AAAGTTGAACCTGGAGTATGGACAGGAGATATCGATACTTCAAGGGTATT TAACCACGATGAAACACCGCAGTTTGTTAACTATGGAGTCGATGCTACTC AATCTGGTTTGGCATACGCCGCTCGCGGAGAATCATGCAAAAAGATGATG CGGGAGAATCGTGAATCTGTGACCATTTGTCCAGTTGTTTCATTAGCAGG TATTATTTACAGCATATTCTATAGTATTTTTAATGAATCATGCTAAAACT TATCAAAGGtcgaattatttttaaaaaatgttatgaatataatttgacca ttttctttatttttaggagAAATGGCTGTCTCTCAGGTATTGTTCTCTGG AAAAGGCATAACAACACATATGTGCCCGAAGCCAGTTGCAAAGAAGATCA ACAATCTCTTGATATCTTCCACTGAAAAAGGCAGTCAAGACAACAAATCT CTCCTTGAATGTTACCGCTTATTTGATAAGTATCTTGACGAAAAGAAAAT TCAACGACCAGTAGTTATGTTGGCTGATGGGCATAGCTCAAGATTTGATT ATAAAGTATTAAAGTTCCTCAGGGAACATAAAATTAATTTGTTCATATCG CCACCAGATACAACTGGGGTGACACAGTTACTCGACCAACATCCAAATCA AAGTTTGCATAAAGAATACAACAGTAAAAGAGACGAACTTTTCCCTGGCT TTCAAACGATCAACCGAGAAGGTTTTATGAACATCTTAGGAGAGATATGG GAAAAATGGGCTACGGAGGAAACAATACTGAAAGCTGCTAAACGAGTTGG TATCTCCAAAGATGGGCTTAATGTTGAAGATATGCAACAAGATAAATTCG AACAAGCGGCCCTCATTATGAATAAAGACAAGGATATAGAAAAGCCTGGA CCGAGTACACCGAATAAAAGATGCACCCGTACTTCGGCTAGAGCTACTTT AGGATCATCTGCCGAGACACCAAGCACCCCTAAATCAATGTCGAAGCTCG CACAATCAAAGTACAAATACGGTTCTGTTGAATATTGGAAATGCATGTGT GAGCAGTACCAAGGAATAATCAAAGATGGCTACGAAAAAAGCTTGAAATT AGAAGAAATACCTGGATTGTTATCAATCAAAAAAGTCAAACCCAAGGAAT TAGAGAAAACGAAAAACATCCGAATCACCAACGTACATGGCAGCATGGAA GCTCAAGACATCTTAAGCAGAGTGGAAGCGATTGAAAAAGAAAAGCAGAA AAAGGAACAGCAAAAGGAAGAAAAACTACAGCAGAAAAATTGGGAAAAAG AAGCATTTTTCAGATGCAAGAAAAATTGTGTCTGTTCTGACGGTGAATGT GAAGCTAAGGGACTCAAGCAGTGCCCAGTTTGTTTTGAGGTGAAAAGGTC AGTTTGCAGCAAAAATAAATGTCAGGTCAATGGAAAGAAACCAATCATGA TAACACTGCCAAAGGGAGAAGTTTTCAAAGATAATAAACGGAAGCTCAGT ACCGAGTCTGAGTATGAAAGTGACTTTACTAGTGATGAAAACGAATTCGA AGATGTTTTTGAAGATGCTGAAACCTCTTCTAAAGATGAGGAGACAGCTA CAAATGAAAAGGTTTCAGCTAAGCTTCTTGACACATGGAAAAAGCTTTGT CCACCAACAAAAGAAGATGATGTTCTTAAAAAGTGGTACGTTGGGGTACG TTCAACAAAAAAATCCAATCAATTATGTATTGGTCGTTTAGAAATGAGAT TTCTAGATGATGTCGATGGAAAGGTTGTCTCCGTTATCCTAAAATGCTTA AACCCCAAACTCGGGAAAGGAACAATGATGGACGAAGCTCCTGAAAATGC AGATGCATTCCTATTTCAGATTGAGGATATAATAGATGGTCCAATAAAAG CTGTTCCTCGACGTAACCTAAAATGGAATATTCCTGATTATAAGGAGATT CGTGATCATTTTGAGAATGCTGTAAAAATTGATAGGCTATCTCTAAAAAA CATGTCATTTTAGTTTATAGATTTATTTTGATTTATGATTTTTGATGTTG ATTTAGTTGAATTTTTTTGTGTCTCATGTCATTTGAATGATTAAAATATG ACAAAGTTGATTTTAAAGTTAATTGCTCAAATCACTTTTTTTTGGCTGGT ACACCTCAAAAACTACAAAAATTTGATAACAATTGGAGGTCTAATTACTT TCTTTGACGACTATCTATTAAAAAGACAATGATTTTTCCATATCTACAGT AAGTATAGGTATCTAAAAAGTATAGGTTTTCTGACCTTAAATTCAATTGC CTGGTCTGTAAGGCCAAAAAACCTGATTTTTTAAAGCAAATTATGATAAA ATTTTGAAT

Coding sequence (CDS) from alignment at scaffold_204:217148..219856+

>TCONS_00051753 ID=TCONS_00051753|Name=TCONS_00051753|organism=Clytia hemisphaerica|type=CDS|length=6327bp|location=Sequence derived from alignment at scaffold_204:217148..219856+ (Clytia hemisphaerica)
CACAACCAAAATAATATTCATATGCTTTCTTTCACTAGCCTCTCGCAATC
ATTCTGGCAAAGGTTTGAAGCAGAAAACCCTGATATTTCTCTGAAACGAC
AAGGCACGGTTTCCATCAATAGAGCACTAAATTGTACGAGAGAGATGGCT
GAGGTGCATCTAGACGACCTGGCCGAAGAGTTAATTTCGTGCGAGATCTT
TAAAAATGCTGAGAAAGTTGAACCTGGAGTATGGACAGGAGATATCGATA
CTTCAAGGGTATTTAACCACGATGAAACACCGCAGTTTGTTAACTATGGA
GTCGATGCTACTCAATCTGGTTTGGCATACGCCGCTCGCGGAGAATCATG
CAAAAAGATGATGCGGGAGAATCGTGAATCTGTGACCATTTGTCCAGTTG
TTTCATTAGCAGgagAAATGGCTGTCTCTCAGGTATTGTTCTCTGGAAAA
GGCATAACAACACATATGTGCCCGAAGCCAGTTGCAAAGAAGATCAACAA
TCTCTTGATATCTTCCACTGAAAAAGGCAGTCAAGACAACAAATCTCTCC
TTGAATGTTACCGCTTATTTGATAAGTATCTTGACGAAAAGAAAATTCAA
CGACCAGTAGTTATGTTGGCTGATGGGCATAGCTCAAGATTTGATTATAA
AGTATTAAAGTTCCTCAGGGAACATAAAATTAATTTGTTCATATCGCCAC
CAGATACAACTGGGGTGACACAGTTACTCGACCAACATCCAAATCAAAGT
TTGCATAAAGAATACAACAGTAAAAGAGACGAACTTTTCCCTGGCTTTCA
AACGATCAACCGAGAAGGTTTTATGAACATCTTAGGAGAGATATGGGAAA
AATGGGCTACGGAGGAAACAATACTGAAAGCTGCTAAACGAGTTGGTATC
TCCAAAGATGGGCTTAATGTTGAAGATATGCAACAAGATAAATTCGAACA
AGCGGCCCTCATTATGAATAAAGACAAGGATATAGAAAAGCCTGGACCGA
GTACACCGAATAAAAGATGCACCCGTACTTCGGCTAGAGCTACTTTAGGA
TCATCTGCCGAGACACCAAGCACCCCTAAATCAATGTCGAAGCTCGCACA
ATCAAAGTACAAATACGGTTCTGTTGAATATTGGAAATGCATGTGTGAGC
AGTACCAAGGAATAATCAAAGATGGCTACGAAAAAAGCTTGAAATTAGAA
GAAATACCTGGATTGTTATCAATCAAAAAAGTCAAACCCAAGGAATTAGA
GAAAACGAAAAACATCCGAATCACCAACGTACATGGCAGCATGGAAGCTC
AAGACATCTTAAGCAGAGTGGAAGCGATTGAAAAAGAAAAGCAGAAAAAG
GAACAGCAAAAGGAAGAAAAACTACAGCAGAAAAATTGGGAAAAAGAAGC
ATTTTTCAGATGCAAGAAAAATTGTGTCTGTTCTGACGGTGAATGTGAAG
CTAAGGGACTCAAGCAGTGCCCAGTTTGTTTTGAGGTGAAAAGGTCAGTT
TGCAGCAAAAATAAATGTCAGGTCAATGGAAAGAAACCAATCATGATAAC
ACTGCCAAAGGGAGAAGTTTTCAAAGATAATAAACGGAAGCTCAGTACCG
AGTCTGAGTATGAAAGTGACTTTACTAGTGATGAAAACGAATTCGAAGAT
GTTTTTGAAGATGCTGAAACCTCTTCTAAAGATGAGGAGACAGCTACAAA
TGAAAAGGTTTCAGCTAAGCTTCTTGACACATGGAAAAAGCTTTGTCCAC
CAACAAAAGAAGATGATGTTCTTAAAAAGTGGTACGTTGGGGTACGTTCA
ACAAAAAAATCCAATCAATTATGTATTGGTCGTTTAGAAATGAGATTTCT
AGATGATGTCGATGGAAAGGTTGTCTCCGTTATCCTAAAATGCTTAAACC
CCAAACTCGGGAAAGGAACAATGATGGACGAAGCTCCTGAAAATGCAGAT
GCATTCCTATTTCAGATTGAGGATATAATAGATGGTCCAATAAAAGCTGT
TCCTCGACGTAACCTAAAATGGAATATTCCTGATTATAAGGAGATTCGTG
ATCATTTTGAGAATGCTGTAAAAATTGATAGGCTATCTCTAAAAAACATG
TCATTTTAGCACAACCAAAATAATATTCATATGCTTTCTTTCACTAGCCT
CTCGCAATCATTCTGGCAAAGGTTTGAAGCAGAAAACCCTGATATTTCTC
TGAAACGACAAGGCACGGTTTCCATCAATAGAGCACTAAATTGTACGAGA
GAGATGGCTGAGGTGCATCTAGACGACCTGGCCGAAGAGTTAATTTCGTG
CGAGATCTTTAAAAATGCTGAGAAAGTTGAACCTGGAGTATGGACAGGAG
ATATCGATACTTCAAGGGTATTTAACCACGATGAAACACCGCAGTTTGTT
AACTATGGAGTCGATGCTACTCAATCTGGTTTGGCATACGCCGCTCGCGG
AGAATCATGCAAAAAGATGATGCGGGAGAATCGTGAATCTGTGACCATTT
GTCCAGTTGTTTCATTAGCAGgagAAATGGCTGTCTCTCAGGTATTGTTC
TCTGGAAAAGGCATAACAACACATATGTGCCCGAAGCCAGTTGCAAAGAA
GATCAACAATCTCTTGATATCTTCCACTGAAAAAGGCAGTCAAGACAACA
AATCTCTCCTTGAATGTTACCGCTTATTTGATAAGTATCTTGACGAAAAG
AAAATTCAACGACCAGTAGTTATGTTGGCTGATGGGCATAGCTCAAGATT
TGATTATAAAGTATTAAAGTTCCTCAGGGAACATAAAATTAATTTGTTCA
TATCGCCACCAGATACAACTGGGGTGACACAGTTACTCGACCAACATCCA
AATCAAAGTTTGCATAAAGAATACAACAGTAAAAGAGACGAACTTTTCCC
TGGCTTTCAAACGATCAACCGAGAAGGTTTTATGAACATCTTAGGAGAGA
TATGGGAAAAATGGGCTACGGAGGAAACAATACTGAAAGCTGCTAAACGA
GTTGGTATCTCCAAAGATGGGCTTAATGTTGAAGATATGCAACAAGATAA
ATTCGAACAAGCGGCCCTCATTATGAATAAAGACAAGGATATAGAAAAGC
CTGGACCGAGTACACCGAATAAAAGATGCACCCGTACTTCGGCTAGAGCT
ACTTTAGGATCATCTGCCGAGACACCAAGCACCCCTAAATCAATGTCGAA
GCTCGCACAATCAAAGTACAAATACGGTTCTGTTGAATATTGGAAATGCA
TGTGTGAGCAGTACCAAGGAATAATCAAAGATGGCTACGAAAAAAGCTTG
AAATTAGAAGAAATACCTGGATTGTTATCAATCAAAAAAGTCAAACCCAA
GGAATTAGAGAAAACGAAAAACATCCGAATCACCAACGTACATGGCAGCA
TGGAAGCTCAAGACATCTTAAGCAGAGTGGAAGCGATTGAAAAAGAAAAG
CAGAAAAAGGAACAGCAAAAGGAAGAAAAACTACAGCAGAAAAATTGGGA
AAAAGAAGCATTTTTCAGATGCAAGAAAAATTGTGTCTGTTCTGACGGTG
AATGTGAAGCTAAGGGACTCAAGCAGTGCCCAGTTTGTTTTGAGGTGAAA
AGGTCAGTTTGCAGCAAAAATAAATGTCAGGTCAATGGAAAGAAACCAAT
CATGATAACACTGCCAAAGGGAGAAGTTTTCAAAGATAATAAACGGAAGC
TCAGTACCGAGTCTGAGTATGAAAGTGACTTTACTAGTGATGAAAACGAA
TTCGAAGATGTTTTTGAAGATGCTGAAACCTCTTCTAAAGATGAGGAGAC
AGCTACAAATGAAAAGGTTTCAGCTAAGCTTCTTGACACATGGAAAAAGC
TTTGTCCACCAACAAAAGAAGATGATGTTCTTAAAAAGTGGTACGTTGGG
GTACGTTCAACAAAAAAATCCAATCAATTATGTATTGGTCGTTTAGAAAT
GAGATTTCTAGATGATGTCGATGGAAAGGTTGTCTCCGTTATCCTAAAAT
GCTTAAACCCCAAACTCGGGAAAGGAACAATGATGGACGAAGCTCCTGAA
AATGCAGATGCATTCCTATTTCAGATTGAGGATATAATAGATGGTCCAAT
AAAAGCTGTTCCTCGACGTAACCTAAAATGGAATATTCCTGATTATAAGG
AGATTCGTGATCATTTTGAGAATGCTGTAAAAATTGATAGGCTATCTCTA
AAAAACATGTCATTTTAGCACAACCAAAATAATATTCATATGCTTTCTTT
CACTAGCCTCTCGCAATCATTCTGGCAAAGGTTTGAAGCAGAAAACCCTG
ATATTTCTCTGAAACGACAAGGCACGGTTTCCATCAATAGAGCACTAAAT
TGTACGAGAGAGATGGCTGAGGTGCATCTAGACGACCTGGCCGAAGAGTT
AATTTCGTGCGAGATCTTTAAAAATGCTGAGAAAGTTGAACCTGGAGTAT
GGACAGGAGATATCGATACTTCAAGGGTATTTAACCACGATGAAACACCG
CAGTTTGTTAACTATGGAGTCGATGCTACTCAATCTGGTTTGGCATACGC
CGCTCGCGGAGAATCATGCAAAAAGATGATGCGGGAGAATCGTGAATCTG
TGACCATTTGTCCAGTTGTTTCATTAGCAGgagAAATGGCTGTCTCTCAG
GTATTGTTCTCTGGAAAAGGCATAACAACACATATGTGCCCGAAGCCAGT
TGCAAAGAAGATCAACAATCTCTTGATATCTTCCACTGAAAAAGGCAGTC
AAGACAACAAATCTCTCCTTGAATGTTACCGCTTATTTGATAAGTATCTT
GACGAAAAGAAAATTCAACGACCAGTAGTTATGTTGGCTGATGGGCATAG
CTCAAGATTTGATTATAAAGTATTAAAGTTCCTCAGGGAACATAAAATTA
ATTTGTTCATATCGCCACCAGATACAACTGGGGTGACACAGTTACTCGAC
CAACATCCAAATCAAAGTTTGCATAAAGAATACAACAGTAAAAGAGACGA
ACTTTTCCCTGGCTTTCAAACGATCAACCGAGAAGGTTTTATGAACATCT
TAGGAGAGATATGGGAAAAATGGGCTACGGAGGAAACAATACTGAAAGCT
GCTAAACGAGTTGGTATCTCCAAAGATGGGCTTAATGTTGAAGATATGCA
ACAAGATAAATTCGAACAAGCGGCCCTCATTATGAATAAAGACAAGGATA
TAGAAAAGCCTGGACCGAGTACACCGAATAAAAGATGCACCCGTACTTCG
GCTAGAGCTACTTTAGGATCATCTGCCGAGACACCAAGCACCCCTAAATC
AATGTCGAAGCTCGCACAATCAAAGTACAAATACGGTTCTGTTGAATATT
GGAAATGCATGTGTGAGCAGTACCAAGGAATAATCAAAGATGGCTACGAA
AAAAGCTTGAAATTAGAAGAAATACCTGGATTGTTATCAATCAAAAAAGT
CAAACCCAAGGAATTAGAGAAAACGAAAAACATCCGAATCACCAACGTAC
ATGGCAGCATGGAAGCTCAAGACATCTTAAGCAGAGTGGAAGCGATTGAA
AAAGAAAAGCAGAAAAAGGAACAGCAAAAGGAAGAAAAACTACAGCAGAA
AAATTGGGAAAAAGAAGCATTTTTCAGATGCAAGAAAAATTGTGTCTGTT
CTGACGGTGAATGTGAAGCTAAGGGACTCAAGCAGTGCCCAGTTTGTTTT
GAGGTGAAAAGGTCAGTTTGCAGCAAAAATAAATGTCAGGTCAATGGAAA
GAAACCAATCATGATAACACTGCCAAAGGGAGAAGTTTTCAAAGATAATA
AACGGAAGCTCAGTACCGAGTCTGAGTATGAAAGTGACTTTACTAGTGAT
GAAAACGAATTCGAAGATGTTTTTGAAGATGCTGAAACCTCTTCTAAAGA
TGAGGAGACAGCTACAAATGAAAAGGTTTCAGCTAAGCTTCTTGACACAT
GGAAAAAGCTTTGTCCACCAACAAAAGAAGATGATGTTCTTAAAAAGTGG
TACGTTGGGGTACGTTCAACAAAAAAATCCAATCAATTATGTATTGGTCG
TTTAGAAATGAGATTTCTAGATGATGTCGATGGAAAGGTTGTCTCCGTTA
TCCTAAAATGCTTAAACCCCAAACTCGGGAAAGGAACAATGATGGACGAA
GCTCCTGAAAATGCAGATGCATTCCTATTTCAGATTGAGGATATAATAGA
TGGTCCAATAAAAGCTGTTCCTCGACGTAACCTAAAATGGAATATTCCTG
ATTATAAGGAGATTCGTGATCATTTTGAGAATGCTGTAAAAATTGATAGG
CTATCTCTAAAAAACATGTCATTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032762XLOC_032762Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051753-proteinTCONS_00051753-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051753-exon-scaffold_204-1491911889:217148..217312TCONS_00051753-exon-scaffold_204-1491911889:217148..217312Clytia hemisphaericaexon
TCONS_00051753-exon-scaffold_204-1510915933:217148..217312TCONS_00051753-exon-scaffold_204-1510915933:217148..217312Clytia hemisphaericaexon
TCONS_00051753-exon-scaffold_204-1575043694:217148..217312TCONS_00051753-exon-scaffold_204-1575043694:217148..217312Clytia hemisphaericaexon
TCONS_00051753-exon-scaffold_204-1491911889:217448..217696TCONS_00051753-exon-scaffold_204-1491911889:217448..217696Clytia hemisphaericaexon
TCONS_00051753-exon-scaffold_204-1510915933:217448..217696TCONS_00051753-exon-scaffold_204-1510915933:217448..217696Clytia hemisphaericaexon
TCONS_00051753-exon-scaffold_204-1575043694:217448..217696TCONS_00051753-exon-scaffold_204-1575043694:217448..217696Clytia hemisphaericaexon
TCONS_00051753-exon-scaffold_204-1491911889:217814..219856TCONS_00051753-exon-scaffold_204-1491911889:217814..219856Clytia hemisphaericaexon
TCONS_00051753-exon-scaffold_204-1510915933:217814..219856TCONS_00051753-exon-scaffold_204-1510915933:217814..219856Clytia hemisphaericaexon
TCONS_00051753-exon-scaffold_204-1575043694:217814..219856TCONS_00051753-exon-scaffold_204-1575043694:217814..219856Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_204supercontigscaffold_204:217148..219856 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.536585 0.523255 0.714764 0.646838 0.808746 0.706354 1.21741 1.36767 1.80868 1.18606 1.71084 2.20724 3.42171 4.1421 0.385344 0.65396 0.46205 0.71645 1.81186 2.17687 0.991825 1.0271 0.398095 0.41128 1.99943 2.38934 0.367882 0.323329 0.227717 0.160621
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051753 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top