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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051759 ID=TCONS_00051759|Name=TCONS_00051759|organism=Clytia hemisphaerica|type=transcript|length=2105bp
CGGGGATTCTTGTAGTAATAGAGAGGTTGTTTCTAGTTCTTCTATTGACT
GCATGAAAGTTTCTTTACTGAAGTTGCTGTTATGTCTTTTTAGGATGGAT
TGAAGATGGAAACAGATATCTAGGTGAGTTGTCATTTTCTGTTGTTCGAT
GGCGTAGCAAATTTCAAAGAGGATTAAAGAGAAAGATTCAAAGTTTACAG
ATTTTTGGGAAAGAGATAGGATTTCGGAGGAGAGTTCAGATGAAAGGTTT
TCTTTGGTGACATAATTGTCTTTTATATCTTCTATGTGCTCAAAtatgat
tttattttggttttcaactttttctagaCGTGTGGATATGGAGTTTATTA
CATTATTTACTTTCGTGACATTTTTCTCGAgagctgaaaatttttcaaag
atagTTTCTGTGTTGACCGTAATTTTTTCCAGAAGAGTGGCTAATTCTGT
TACTTGGGATTTGACTAAACCCATACCTTCTGTACAACTATTGACACTTG
TTTTCAAAGATTCAGATTCTTTACCAAAGTTTGCAACCTGTGCATAAGAT
TTTTCTAGTTGGGAATACGAACTTTTAACTTCTTTGACAGAATTGTTAAT
GGCAGAAATTTTGGTGGATCTTTGTCTGTCTTGTCGTGTGATGGTGGCTT
TTTCTACTAGTCTCTTGTAAACGGAGCAGCCTCTATAAAATGATGAATGG
TTTTTCTCACAATTGACACACTTTTTCTGATTACATTTTTTCCTACAATC
TTCTTTTCCACACCAGCTACACAAGGAGTTTTTTTGTTTACAGGTGGATT
GTACATGGCCAAACTTTAGACACTTTTTACATTGAATGATGTAATTATCA
ATGGGATCAAATTTTCTAACGAAGTGTTTGGTTATTTTGTTATTGGCTTT
GATGGTGAGTGGAAATTCTTCTTCTATGTCTCCTTTTAGGACCTCAAAAA
CAACAAGATTACCTTCTCTTCTAAGattatatactttttttcaCATGATA
TTCCAGATGGTCAAAGACTAATTGGAGAGAAATAGGGGGGCCAGCTTCTG
ATTCCATGGCTAATTTATTAATACAAAAACTATCAAGAAGATTAGATTTT
TTATCTATCGATAaagtgtttattttttcactccAATTGTCTTTATCAAG
GAGGAATTCGATTTCAGTGACGTCGATCTCACATATTAAAGTAGAGGATT
TAGTGTGTGCCTCAGTAGCAGAAAGGAAGGAAAAATTACTAATGTGAGAG
TTTAAGTCTTCTAAATTATATGGTTTATTAAACGAATGATCATGAAGTAT
tacttttatctttttctttttgggtCTTTCTTGGATGAAAGGATTTCTAG
GTGTTCTTTTGGTCTCAAAGCCTGTTTCTAACATTTCTTCATCAGAGTGT
GTTTCTTGAGGTTTAATTATGGAAGGATTTAATTTTGAAGAAGAAGGATT
ATTTTCAGAAGATTTTAATTTAGTAGAAGAGCGGTTATTTTCGAGAGATT
TTAATTTGGAGGAGGAAGACAAGTCAGAATTTTCAGAGTTAGAAGTAGTA
GAGGATTGTGAGTTAGAACGAGAACGTGGTTTAATAATTCTGGAAATGCC
AAAGTGgactttttgtttcttctgaGAGTTAAAATCAGCTTTTAAGTCTT
CAATGTTGTGACTTACATCATCAAGAGGAGATGGAGGACCTCTTTTGGTA
CTATTTGACATAGTGTGGTGACGTAAGTGTCAGAGAAGATAAGATAATTA
AAAGAAGAGATTACTAAACAGACAGAGGTATTTCAAATTAGCAAACAGGA
ACAAGAAGTACACTAGGCCCAATGTACTTCGGGGCCGAAGCCCCTCTATC
aacgattaaaaactttaaaaacctCTCTTGTATCAAGATTATGGTATATG
ATCCGCTttcacactgaagtgattaacgcgtttggaaaaaaaaatttttt
tttgtattgttAAGTGATATATTATAAAAGTATTGGTATATTTTTTCCGC
TttcacactgaagtgattaacgcGTTTTGTAAAATTAATTATTGTAAAAT
GTATAAACAACAAGAAACGTTTGGTTTTTTGCAGTAGAACTGAAACCAAA
CCGGC Run BLAST on NCBI transcript from alignment at scaffold_204:117069..119173- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051759 ID=TCONS_00051759|Name=TCONS_00051759|organism=Clytia hemisphaerica|type=transcript|length=2105bp|location=Sequence derived from alignment at scaffold_204:117069..119173- (Clytia hemisphaerica)
CGGGGATTCTTGTAGTAATAGAGAGGTTGTTTCTAGTTCTTCTATTGACT
GCATGAAAGTTTCTTTACTGAAGTTGCTGTTATGTCTTTTTAGGATGGAT
TGAAGATGGAAACAGATATCTAGGTGAGTTGTCATTTTCTGTTGTTCGAT
GGCGTAGCAAATTTCAAAGAGGATTAAAGAGAAAGATTCAAAGTTTACAG
ATTTTTGGGAAAGAGATAGGATTTCGGAGGAGAGTTCAGATGAAAGGTTT
TCTTTGGTGACATAATTGTCTTTTATATCTTCTATGTGCTCAAATATGAT
TTTATTTTGGTTTTCAACTTTTTCTAGACGTGTGGATATGGAGTTTATTA
CATTATTTACTTTCGTGACATTTTTCTCGAGAGCTGAAAATTTTTCAAAG
ATAGTTTCTGTGTTGACCGTAATTTTTTCCAGAAGAGTGGCTAATTCTGT
TACTTGGGATTTGACTAAACCCATACCTTCTGTACAACTATTGACACTTG
TTTTCAAAGATTCAGATTCTTTACCAAAGTTTGCAACCTGTGCATAAGAT
TTTTCTAGTTGGGAATACGAACTTTTAACTTCTTTGACAGAATTGTTAAT
GGCAGAAATTTTGGTGGATCTTTGTCTGTCTTGTCGTGTGATGGTGGCTT
TTTCTACTAGTCTCTTGTAAACGGAGCAGCCTCTATAAAATGATGAATGG
TTTTTCTCACAATTGACACACTTTTTCTGATTACATTTTTTCCTACAATC
TTCTTTTCCACACCAGCTACACAAGGAGTTTTTTTGTTTACAGGTGGATT
GTACATGGCCAAACTTTAGACACTTTTTACATTGAATGATGTAATTATCA
ATGGGATCAAATTTTCTAACGAAGTGTTTGGTTATTTTGTTATTGGCTTT
GATGGTGAGTGGAAATTCTTCTTCTATGTCTCCTTTTAGGACCTCAAAAA
CAACAAGATTACCTTCTCTTCTAAGATTATATACTTTTTTTCACATGATA
TTCCAGATGGTCAAAGACTAATTGGAGAGAAATAGGGGGGCCAGCTTCTG
ATTCCATGGCTAATTTATTAATACAAAAACTATCAAGAAGATTAGATTTT
TTATCTATCGATAAAGTGTTTATTTTTTCACTCCAATTGTCTTTATCAAG
GAGGAATTCGATTTCAGTGACGTCGATCTCACATATTAAAGTAGAGGATT
TAGTGTGTGCCTCAGTAGCAGAAAGGAAGGAAAAATTACTAATGTGAGAG
TTTAAGTCTTCTAAATTATATGGTTTATTAAACGAATGATCATGAAGTAT
TACTTTTATCTTTTTCTTTTTGGGTCTTTCTTGGATGAAAGGATTTCTAG
GTGTTCTTTTGGTCTCAAAGCCTGTTTCTAACATTTCTTCATCAGAGTGT
GTTTCTTGAGGTTTAATTATGGAAGGATTTAATTTTGAAGAAGAAGGATT
ATTTTCAGAAGATTTTAATTTAGTAGAAGAGCGGTTATTTTCGAGAGATT
TTAATTTGGAGGAGGAAGACAAGTCAGAATTTTCAGAGTTAGAAGTAGTA
GAGGATTGTGAGTTAGAACGAGAACGTGGTTTAATAATTCTGGAAATGCC
AAAGTGGACTTTTTGTTTCTTCTGAGAGTTAAAATCAGCTTTTAAGTCTT
CAATGTTGTGACTTACATCATCAAGAGGAGATGGAGGACCTCTTTTGGTA
CTATTTGACATAGTGTGGTGACGTAAGTGTCAGAGAAGATAAGATAATTA
AAAGAAGAGATTACTAAACAGACAGAGGTATTTCAAATTAGCAAACAGGA
ACAAGAAGTACACTAGGCCCAATGTACTTCGGGGCCGAAGCCCCTCTATC
AACGATTAAAAACTTTAAAAACCTCTCTTGTATCAAGATTATGGTATATG
ATCCGCTTTCACACTGAAGTGATTAACGCGTTTGGAAAAAAAAATTTTTT
TTTGTATTGTTAAGTGATATATTATAAAAGTATTGGTATATTTTTTCCGC
TTTCACACTGAAGTGATTAACGCGTTTTGTAAAATTAATTATTGTAAAAT
GTATAAACAACAAGAAACGTTTGGTTTTTTGCAGTAGAACTGAAACCAAA
CCGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051759-exon-scaffold_204-1575043694:117069..119173 | TCONS_00051759-exon-scaffold_204-1575043694:117069..119173 | Clytia hemisphaerica | exon |
| TCONS_00051759-exon-scaffold_204-1510915933:117069..119173 | TCONS_00051759-exon-scaffold_204-1510915933:117069..119173 | Clytia hemisphaerica | exon |
| TCONS_00051759-exon-scaffold_204-1491911889:117069..119173 | TCONS_00051759-exon-scaffold_204-1491911889:117069..119173 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_204 | supercontig | scaffold_204:117069..119173 - |
Blast
The following BLAST results are available for this feature:
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