TCONS_00051792 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051792
Unique NameTCONS_00051792
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1899

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051792 ID=TCONS_00051792|Name=TCONS_00051792|organism=Clytia hemisphaerica|type=transcript|length=1899bp
TACCACTTCACGTCAAATACTTAGATGTTCCACACGGTGCACATGTAGAC
AAAAAATGtagaagaaaattggaaagCCTGTTGTCACCTGATGGATTTAT
CTACGAAAAGGCCATCAGAGATCTGGATCCTAGTATTGTGTATGGCGAAG
ATGAAATGCAGATGATTTTAGCGCAATTAAATATACTTCATTACACGATC
AAGACAACACTAGAGCATAAACGCACAAAATATACGAAAGGAAACATGGA
AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA
ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA
TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC
CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA
ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA
TGGAAGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACT
GAGTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATC
ATatttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGG
AAAGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATC
CAATCAGCATTCTATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAAC
TACCTGAATCTTCTTACATGACTGCTCAATTGATGGACTTTGAAACTGGT
GACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATAC
GCTGAAAAACCCTAATATAAAGTGGAGAATTGACAGAACTCAGCGTAAAG
AAAATGGTGTGGATTTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCA
TTCGTTTGGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGAT
ACTTATAAACACACCGACTAGAAGGctatttcaaaagtaaaaaaagcaaa
acaaaatgccAGCCATTTTTGATAAAGCAGAAGATTGTCGCCCAGAATGG
ACCAATGCCAAAGCTGAATTCGATGATGTGGATGAGCATTTGGTTATCTG
TGGAAAACCCGTCATGGAAAGATGGGAAACCCCTTACATGCATGCATTAG
CTGATATTGCTGCTAGCAGAGGTGGTCGTGTTCTCGAGCTTGGATTCGGA
ATGGCAATCTCCGGATCACGTATTGAAACGTACAAAGTGGACGAGCACGT
GATCGTTGAATGCAACGATGGAGTgttcgaaaaattgaaagtctTTGCTA
AAAATGCACCGAACAAAGTGACACCCTTGAAAGgattttggCAAGATGTT
GTTCCCACTTTACCTGACGCAAGTTTTGACGCCATTTTGTATGACACTTT
TCCCTTGTCGGACGACACGTGGCATACACATCAATTCGAATTCATCAATG
GGCATGCGCAAAGGCTACTCAAACCAGGTGGTATTTTGACTTATTGCAAT
CTAACATCATGGGGAGAAAATTTAAAAGGGCAATATGATGATATCGAAAA
AATGTTCCGAGAAACGCAAATTCCGAAATTGGAAGAAGCAGgatttaaaa
aggaaaatatttcttggagGCTTTTGGATATTGTTCCAGAAAAAGAATGC
AGATATTATCAATTTAACAAAATGTTGGCACCAACTTGTGTCAAAAAATA
AACTGTATATGACCTCGTGTTAAAAGGGCACTAGCTTTGTTAATATTGTT
TGTCATTGATATCTACTCTACGTATTTTTCTTTATGTaactttgtatatt
tttttttttcatttttgacagcaaagatattcttcatttttcttaatca
Run BLAST on NCBI

transcript from alignment at scaffold_205:22388..42216+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051792 ID=TCONS_00051792|Name=TCONS_00051792|organism=Clytia hemisphaerica|type=transcript|length=19829bp|location=Sequence derived from alignment at scaffold_205:22388..42216+ (Clytia hemisphaerica)
TACCACTTCACGTCAAATACTTAGATGTTCCACACGGTGCACATGTAGAC
AAAAAATGtagaagaaaattggaaagCCTGTTGTCACCTGATGGATTTAT
CTACGAAAAGGCCATCAGAGATCTGGATCCTAGTATTGTGTATGGCGAAG
ATGAAATGCAGATGATTTTAGCGCAATTAAATATACTTCATTACACGATC
AAGACAACACTAGAGCATAAACGCACAAAATATACGAAAGGTTATTTCAA
TTTCAACGCGAAAAATAATTAATTAGATGTTGTACGGCTCTTTTACAAAT
TTATAAATCCAGTGGACTGTCGCAAATTTAAACTTACACTATTCAATTTT
TTCTACAATTCCAATGAATTCTCAGTCCCCAATCAAAGAGAAACCCTCGT
AAAAATCTTTCtataaggcgaaaataaaaatatgtagtgtttccggaaac
cggccgggtgaaaaaaataaattttttatgacccggccgcagacttatgg
ttcatcataaagaaaatcaagtggaccgttcaagctatcaaacgttgTTT
GGgtagatattcccgcttgtaaatcaagttttgtttcgTTAGTaattgat
acattagtattcagggcttacttcatactgtttgtacataaaagttatct
ttaaaagttctatttcaattatcttaagttatcaaaaatagcaacaacaa
aaattttccggccggctgcatgagagcttttttccttcacctgcattccg
gaaacactataTATTATTATTTTCGCCTAATATGAACAAATTACACCTAC
CGTTAGACTTTGTAGTACAAGAGTTGACTTCGAAACTCACTCAAATTCAC
AAAGGAAGAAATATATACAGATTTTAATGACTATTTTCATGTtatatgtt
atttttttatgtttggtAGGCTAATCCTATATGAGGCTCCGCCAGCGTTA
GCTCTGATCACGATATTgcgcaattttttgtcttcaatcacgagcacgca
aatcagcaaaaaaaacttGGATAGTCAcacatccctttgaaaaaaagtcc
aaatcacgtatcacggctcaaaaacgatcacgatcacgttttgacctcta
aTCACACAATCATGAAAAAATCACGTGACCAAGCTAAATAAAAGTCCCTA
TCACGACATCACGCATACCACTTGGGGTCCTCCTATATTTTATAATAGAG
TTTAATTGTCCTATCGATGACCAACAGATAAAACACTTTATAAATTACAT
CTCGAGCAATCGTGTCCTACTTACAAATATTACTATACCAACTTTTGTAA
TATGATATTTCTTTAATGTTTCCAgttttttcttcatctttgTTTATTAA
AAGCAGGATTTGGCTCTTATGAATTATCTCTTTGATAATTGTTTCAAGGC
GAGTCAGGGTTTTTGTGATTGACATGACTTTGTCCATTCACTTTAAGTGT
CTATTTATTACTAAGCtatggaaaccactctcaaacataaaatgtaatta
cccctGGCATGGTTTTCGTATGATAGCAAGAAATGGTACACAATTAGCGA
ATAGACTTTGATGAAAAACTGTGACATCTACTTTTCCTAAGCTGTGTAAC
ATTTTCAACtgtcacttttttttaaatatcccTTACAATTCTTTCCTTCT
TTTCCATTATTTTCCATTACTAACATGGTTCTCAGTTGGCTTTTAAATCT
TCAAGGTTTTAAAGACTTTCCTTCGAACTAGAAAAGACTAGGGGAGTTTT
TTTGTATGAGCTTACTATCTTCCAATTTAGTTCGCCATtccttaaaaaaa
tcaaatagtaAAGGTTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTT
CCAGGAAACATGGAAATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACC
GCGATCCAGTAAAAACACTACATTGTATCTTTCAATGATGGTGTACTTAT
CACAGATTGTCCAATCTCTCTGCATCAAATATGAAAGTGAGCATTACAGG
AGACTTCAAGACACCTTGATTGATGGTAAAGGGCATACAATGGGAGCTTT
GTATTGGCAATTGAATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTG
AATATAATGGACAATGGAAGGTAATATTATATCAAAACTTCTatagttga
tgctctctaattcgattggATTGGATTTTAATCCaataagggagcgtatt
gaATAATAGATTTTTATGTCGTCTGTGACTTTTAATATTATCGAGTAATG
GAGCgcatcgaatagtagaaagtcgaataagagagcatcaactatatttt
tttttatttcatttataaccgtattacttcaaataatgcccccttctttt
aaacgcccctcaaataaacgccctctTTGAATAAACGCCTCCCCACTAGG
AAGGGCGTTTACTTCAATGGGATTAATTtcgtggggattaaatttcgcgg
tttagcTCATCTGCGAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNtttatttggcacctaagagtaatgtagcatctttaatggtaaa
tctTTTTGGTTTGTCGTTatacttctcagtgcgttttagacattaatgat
atgcccttgataatacacttgcattataaaatcattgtaaaggagagatc
aacaataagaaatttaaacaagcacaaaatggctgggctgaaagaactca
aaaattaataaagtgcctcgaaatgccttcactACATTTCagtgaatttt
tttagaaatcaatgaaaaagtacatcaagataatactgtgaaaatttaaa
gccagcaccaaaatttatcattcaaactgacaggaaagttgtgagagtaa
gtaagtatttatttatcatttaacactacaaaaaagatacaagtgatgat
atgcacaaaaaatatatgaagggagaccgccttatagtctagctaatcaa
aaagatgcggccacctaagtACAGATTGcgtttataacacttcatgaatt
atttataaatatttatatatcttgaatatagttcttataattttaaatct
ggcgaaaaactattgtttccacaaaatacccctagaatatgtccaaaatt
acttcaagtgttctattgggtacagattaagatatctagcaatgagaaaa
ctttttttgaaggaaaataataAACTGACAATCTTGATGCTCTGATAAAG
Gtcggagacagagatagaacagcaattaactgaaaagacaatgcggtaca
tattccagccgcggttTTTTTATATACTATGGTTTCTCTTCAATGTCTTC
TTTCCTAGTACACAATTATTCTTTTCAATGATTTCATTTGGCCTTCTTGA
TAGACCGTTAAAAAATTTCTTCGTATGCAAACTACGGATGTGGCAAATCA
TTCCTTCTACAAGAATGCAAGTTGATGTATTCGTTCTTTTTATAAAGTTT
GACAGAGAATAATTACTTGTGGTTTTGCTCTTTTGCTCCCTTTTAACCGT
TCAGAATTCCCTTTTGACAAATTTGATGCAATGATTgatgttatcttttt
ttctctttcattgCATCCTGTGTGAGATGtaatcataatttttttgaatt
agcCCGATATATGCTATTTTATATGAATGGACTCGAATGACATACTggcc
aaaatataaaaaatataccgTCAACTTATTTGTAataaatggctgtaact
tttgatagaattcgaatcaagttgcggttGTGTGCTCGTTAAatagatat
tcgtgagtggaatattatcaagtaaaaaaattgagatttagggcattttc
caaacatttttatATGTACTTAATGGTCAATGGTTCTTCGTCGTTGCTCA
AGATTTTCAGAAACACACCATATATTTACATATACACgaacgtccaaagt
tttgaagcgttcggatgttcttaacattttgagttttaagcctaaaaatg
ttcttagcatgttcttattttcgtcatttttgataactttgtcCATTTGC
CTataaaattgggtgttttacaGTCCGCGAAGCCTAacattcttaacttg
ttcctaacattttggtcatcgaagccttatgtatgttcttatatagtttt
agAAAGTTTTAGTCAAGTAGATCAGCTAATTTGACATTGAATTATGTCAC
TAATATGTGAAAATAGTCAATATAGGAGATTTTTGTCctgaaaaagaaac
attttcaatCCATTCGGCTCTTTCCTCTGTGAAAACTTACCTTTATGCCT
AATCATGATATTTGTAGAAATTGTTCGCAGTGTTCTTTATCGGCaagtat
ttttctttctgtttacaGATTTTGCATTATGACGTTGAGAAATTCTTTGC
ACCAACCTCACTGAGTGCTTACCGTAACAAGGATTCCATTGTTGTCAACA
TTGTGCGAGATCATatttcaaatgagaaaaaactgCTGTGCAATATCTCA
TTTCACGATTGGAAAGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTT
AGATTTGTCATCCAATCAGCATTCTGTAATCTATCGTTACTTTTATTTGT
TTCTTGATTTATAGGGGAATACAAGCATTGCTACGGATGAGAAACAGCTG
AGGGCTAAAAAGGAATCTTAAGATACCTTGGATTTCGGCTTATAGATTTA
ATCTAGAGCCTTTTTTATTTATGTACACATTTTCAAGAGGATAGGACCTT
CGCCTCTAGCCTATGGCTATATCTCACCGATTATTACAATATATTTCGGT
CGATTTTATCTTATCTCAGATGGTAAATCTTGAGAAGTGATAAACTTCAT
TCCCTAGCTTACGTTCACTTAAAGTTTTAACTAACATCAATGGTTCCCTG
TTTATCCTAGTAGAAAGGTCAAATTCTTATCTCAAAATTCCCATTTTCAG
TATCTGTCTATGTTGATTTAAGAGTGCACAGTGTTAAACCTTTTGAAATG
CACTTTGCATCTGTATAGAAAATGAAAGATTGCTGTCACACCCATTACTT
CGTGAGCTTTCCAGTTTATGattcttgaaaatgttttagATTGAGATCTT
TCAAAAGAGCATAACCGAGTTGCAACTACCTGAATCTTCTTACATGACTG
CTCAATTGATGGACTTTGAAACTGGTGACGTCGTATCCAGTACTGAATTG
TTTCTGTCAAACTTCTCTGGTGATACGCTGAAAAACCCTAATATAAAGGT
ACTTACTATATagatattttccttttttatgaGCAAAGGTCATGAAACTA
GGCATATCTTATGAGCACTAGAATTAATCTCGTTTCGATAGCCTTGATTC
ACTTGATTATattttgataactgaaaattaattcacgTAGGAATAGGAAA
ACAGCTCAGACCTACTTATCGAGGATATCTTGGTCGGATTATGATTCAAA
TCTATAGAGTTTTTGTCTACAATTAAGTAATAAATAATCTTTTAATTATG
TCTTCAAATTCTTCATGCAACAGAATTCTGGCtggaaaacttttttcgct
aCCCAATGCTTTTGATTTGAAACccaattagaattttttttcgtaaAAAA
TGATATCAAACATGAGGAACTTATGCATCTAACTTTCTTCTAGAGAATGT
GATTTGACGAGGTATAATCCCAAAAGAATCcctaaatttgataccttctt
actgatcaaaatatattttctctaTTTAGTGGAGAATTGACAGAACTCAG
CGTAAAGAAAATGGTGTGGATTTCGATGTAATTTTATCCTTGGACGCTCC
TTCTGCATTCGTTTGGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAA
ACGGGATACTTATAAACACACCGACTAGAAGGGTAAGCTGCTTACTTAAC
TTCTTTTGTTAGTTAAATGACCAAAGCGTCTGTTttatatacacccctgt
ctcacaaccctaGTGAAACTTCTTCCCATGAAAAGTTCTATCGAAATCCC
GATGGGGATaagaattctattgttcttagtTCAAAAACTCCAGTGTATTT
TAAATACGGACGAAGCAAATCAATTTTACAGTTGTCTGAAATTGTAGgga
attttttcccaccggggacgaagttttgtccaaattttccgGTGGGGTTA
GAGTGGGGGTgtcaccgggtctgtgacacatgggTGTTGTTTACCGATCT
CGATATCCTTTTCTGTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAA
AGTTTGTTGAGAAAACAAACACACAAAGTGtgtgaatattttgaaagtaa
tCTATAAAACAGAAAGGTCTTGAACTCCAGTTGATTTCAAAAACAGATAT
ATTTTGGTTGTGTCATTTTTATGAATGAACTTATTATCAATGGACCCGTT
TTCAGAAAACTATGAGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCT
AGACTTTCCATAAGCTTAGAATATTGAGTATTGTGAACACTTTCATTTAT
TTTTCCGAATTTTTCAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTA
TGTTGAAGAAAATGGAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAG
GAGGTTCTGTGGTCACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAA
AAATAAGcattgatttcaaatatataATTCTGTGACGCCAATTTCCATAA
CTTGAACACGCGCGGGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATC
TATAAGACATTGTTGACTGAAGGGACAATGAAACTTGgtcgagttaagga
aacatttgagttatagaggatcgagttaaagagactccgctGTGCTCATG
GCCCCCGTCACCAGGGGAGCCAGGGGGNTAACTTTCTTCTAGAGAATGTG
ATTTGACGAGGTATAATCCCAAAAGAATCcctaaatttgataccttctta
ctgatcaaaatatattttctctaTTTAGTGGAGAATTGACAGAACTCAGC
GTAAAGAAAATGGTGTGGAATTCGATGTAATTTTATCCTTGGACGCTCCT
TCTGCATTCGTTTGGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAA
CGGGATACTTATAAACACACCGACTAGAAGGGTAAGCTGCTTACTTAACT
TCTTTTGTTAGTTAAATGACCAAAGCGTCTGTTttatatacacccctgtc
tcacaaccctaGTGAAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCG
ATGGGGATaagaattctattgttcttagtTCAAAAACTCCAGTGTATTTT
AAATACGGACGAAGCAAAGTCAATTTTACAGTTGTCTGAAATTGTAGgga
attttttcccaccggggacgaagttttgtccaaattttccgGTGGGGTTA
GAGTGGGGGGTgtcaccgggtctgtgacacatgggTGTTGTTTACCGATC
TCGATATCCTTTTCTGTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTA
AAGTTTGTTGAGAAAACAAACACACAAAGTGtgtgaatattttgaaagta
atCTATAAAACAGAAAGGTCTTGAACTCCAGTTGATTTCAAAAACAGATA
TATTTTGGTTGTGTCATTTTTATGAATGAACTTATTATCAATGGACCCGT
TTTCAGAAAACTATGAGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCC
TAGACTTTCCATAAGCTTAGAATATTGAGTATTGTGAACACTTTCATTTA
TTTTTCCGAATTTTTCAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGT
ATGTTGAAGAAAATGGAAGTCGTGACCTGAGAGACAAACCTCTAAAATGA
GGAGGTTCTGTGGTCACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAA
AAAATAAGcattgatttcaaatatataATTCTGTGACGCCAATTTCCATA
ACTTGAACACGCGCGGGGAACAAAGATTTGCTCGGGTTATGGAGTAAGAT
CTATAAGACATTGTTGACTGAAGGGACAATGAAACTTGgtcgagttaagg
aaacatttgagttatagaggatcgagttaaagagactccgctGTGCTCAT
GGCCCCCGTCACCAGGGGAGCCAGGGGGNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccc
aatattttgcaaagtattttttttttactttagaaaatcttatatatacc
gtttagaggggtgaaataagggtaaaaagtcgaaaattttcttcgtcgcc
catccggtgggcgacatttttttttggccccctcaattcgatttgcacgc
cgggggccatgcTATGAAAATTGGTttacatcaaaaaatttctgCACAAA
ACCTCTTTTTGTTGTAAAAAACTTAGTTAATAATCGGTATCTTGACAAAT
TAATTCTGAAGACCAAATTATTTTAAAGTCACAGTCTtgtcaaaatataa
ttttgtgaTATTTCTTTTTATAGATTTCATTTTTGTCATACCATGAGAAG
TCAAATAACCAGAAAGTGGACTTTATGGAGAATGTAACAGTCAAATCTTT
GTATAATGTCTGGCATTAAAATGTCCTTTTGCAAACAATAGACAATGAAA
GGCATTCAAATAGAATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGTTA
ATGGAAAATTATTCccatttcaattttgtttgtgtttacctttaaaaggt
aacatttttaaattgtttttgtttcatttagaaatattttaagactgttt
ttcgATATGAGTATTAAGTTTCTATGATATGATTGAAATGACATTTTAGT
CCATTTATGACGTTGATGTTTGACAAAGCTTTTCATGTGAAAGCTGTTTT
AACTTGAAGCAATGAGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAAAG
ATCACGTGATTATACGCCTGACTATAAAATAAGATTTTATATGATAATAT
AATTATTAATTGGACATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTTGT
TGAGTACTCCAAGGGGatgtaccgggtgcgccaaGAAAAAGTATACAAAG
TGTACAGTATAGTAGGCCTGATTGGTGCTAAAAAAGTTTCTTGGTTAAAA
TAGTGCAAATTTGGAAATCGAATAACTCCCGCTCAGTACAGAAATCGGCC
ATTATCGTCTTCTATAGTCTCCTATATTATTCTTCGAAAGCTTTAATTGG
TTTTGGCCTAAagtgagtttgaaatttccgaAAAAAGATTAGACTCTTGG
GTTGTAGCCTGGTTTTCACGAAATGGGTCAGGAAATAACGGCTATaccct
tttttggacctaccccggtggggtggaggtcctataaattaacccgtgtt
cgttagttagttagttagttaccaacttttctcgagattggctcatNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccaat
attttgcaaagtattttttttttactttagaaaatcttatatataccgtt
tagaggggtgaaataagggtaaaaagtcgaaaattttcttcgtcgcccat
ccggtgggcgacatttttttttggccccctcaattcgatttgcacgccgg
gggccatgcTATGAAAATTGGTttacatcaaaaaatttctgCACAAAACC
TCTTTTTGTTGTAAAAAACTTAGTTAATAATCGGTATCTTGACAAATTAA
TTCTGAAGACCAAATTATTTTAAAGTCACAGTCTtgtcaaaatataattt
tgtgaTATTTCTTTTTATAGATTTCATTTTTGTCATACCATGAGAAGTCA
AATAACCAGAAAGTGGACTTTATGGAGAATGTAACAGTCAAATCTTTGTA
TAATGTCTGGCATTAAAATGTCCTTTTGCAAACAATAGACAATGAAAGGC
ATTCAAATAGAATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATG
GAAAATTATTCccatttcaattttgtttgtgtttacctttaaaaggtaac
atttttaaattgtttttgtttcatttagaaatattttaagactgtttttc
gATATGAGTATTAAGTTTCTATGATATGATTGAAATGACATTTTAGTCCA
TTTATGACGTTGATGTTTGACAAAGCTTTTCATGTGAAAGCTGTTTTAAC
TTGAAGCAATGAGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAAAGATC
ACGTGATTATACGCCTGACTATAAAATAAGATTTTATATGATAATATAAT
TATTAATTGGACATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTTGTTGA
GTACTCCAAGGGGatgtaccgggtgcgccaaaaaaaagtatacaaagtGT
ACAGTATAGTAGGCCTGATTGGTGCTAAAAGAAGTTTCTTGGTTAAAATA
GTGCAAATTTGGAAATCGAATAACTCCCGCTCAGTACAGAAATCGGCCAT
TATCGTCTGCTATATAATTCTTCGAAAGCTTTAATTGGTTTTGGTCTAAa
gtgagtttgaaatttccgaaaaaaaattagacTCTTGGGTTGTAGCCTGG
TTTTTACGAAATGGGTCAGGAAATAACGGCTATACCCTTTTTTACTTCTG
ACTCGAATTTAGAGCTTTGGGTTCcaaattttcacgatttttatGTTACC
AGTTGGGCTATTACTAGCTACtattagcgttttatctaggaAATATAAGA
AAGATTTTAGCCTTatgattttagtttcaattagCAAAGATGTGCCTACC
CCCTGGTTTGGTACATGTGATTATTATAGCAAGTTGAACCAATTAGTGAT
AAGTGAGGCCTGTTGTACGAAAAATCCTGTGgtctcaaatcaaattttta
taatcAGCTTATaattaaaaacaagataaaacttaatccgaaaattgatt
ttgccatGGATCAATGTGGAGTCagatcacaaacaacaaaattttcattt
tttgaaaaaactaatattTCGCTTATCAACAAAAGCATCGTCAGTGTGAT
AGTAATACTGAAAATGTTGAAcaaatttctagaaaaatcaACTAGCGGAA
CAAATTCAAGTCTCTAGAGTCCTTTTCCAACGTTGTTTACGAGTTTAAAT
GTCCTGGATGCTCTTCCAAATACATGGGAAAAAGTGATCGTACCCTATCT
TGTTTTCTATACTGTTTGAAGAAGAGTGTTTGAGCTGACATAAAAAGGTT
TTTGTTTGACGTGGTGAGCGTACAAACatctattatttttttcatagaat
taTTTTATGCTTTCTCAATTATTGAGACGACtttgtaaattttgtagttt
atataggaagaaagaaatttgtaaaaaactaGGCGTTATTTTATTGagaa
ttcgaaaaataaaatttatatggTAGTTATAAATCAATAGatagttttaa
aatgttttacctATCCTGCAGCGAATCTTTTATTTATAATgtcagccatt
ttgaaaaatagtaaACTGGATGGCCACATATCAGGATGAACTGTTTTTAA
CAATGATTGAAATTCAGATTTGAATAACTGAACTTCTGTTCACTGTGACA
GGACGAATAAAGGTAGAGGAATTCGATCGATAACAATCATTTGATGAGAA
TCTAGAAACAGTATAGCGGATTATATATAGGGTGTCTGTCTAgtattgaa
attaattttgcatCTGACACCACGTTTGTGAACTCTGCTAGATCACTTGG
CTTCAGTGTAACTAGCTAGCCTTTGGAGGTTGTTGCTTCTGACCCGATTT
TCACTGGTTGGCGTTTAAATTCGATAAAAGAAGTTACGTGTTCGAAATCT
ATAATTCTCAACTATATTTCACATTCCTTTTTagctatttcaaaagtaaa
aaaagcaaaacaaaatgccAGCCATTTTTGATAAAGCAGAAGATTGTCGC
CCAGAATGGACCAATGCCAAAGCTGAATTCGATGATGTGGATGAGCATTT
GGTTATCTGTGGAAAACCCGTCATGGAAAGATGGGAAACCCCTTACATGC
ATGCATTAGCTGATATTGCTGCTAGCAGAGGTTTGTTTTGAATCTGTCTA
TGTTTGAAACGCCTCAACAACCCATAGAAATCAATTAAAGGGAATAAATT
AGATTGAAGCGCTCACAGTCCATCTCTTCCTCGTTCAAATGTTaatgata
aaaatttgtttGTCCTCAGCCAAagatacgtttttttataagaacaaatt
atataagaaaaaaggctttgatggccaaaatatgtAAGAAAATGTTTACC
ACTGGCTAAACAGGGGTCTAAGACGAaacatttgatttgatttgagttgA
GTTGTTGTAAAACtcaaaatgaaatataaaaCATCTTTAACCTTACAATA
CTAGGTGGTCGTGTTCTCGAGCTTGGATTCGGAATGGCAATCTCCGGATC
ACGTATTGAAACGTACAAAGTGGACGAGCACGTGATCGTTGAATGCAACG
ATGGAGTgttcgaaaaattgaaagtctTTGCTAAAAATGCACCGAACAAA
GTGACACCCTTGAAAGGTAAGATAAATGTTAAACTTATTTTTGTTAGTTA
TTGTCATTGTACTATAAGAAATTCCTGAAAACTGAAGATTCAAAACAACT
GACTCTTTTTTTCAACGAGAGATTTGCTATGATGGTAAAGGTCCCCTGTC
TAAACGTCAAACCACATTTTATGCAAGACACTTTGAGTTATGGAAAGTCT
ACTATGTTTTATCGATTTTAACTACCCTACGATGGTATTACAAAATATAC
CATGCACCTAATTCGTTAAAAACCCAGATTTGNTACCCTACGATGGTATA
AAAAATATACCATGACCTAATTCGTTAAAAAACACAGATCTGAATTTTCA
ACGGCAAATCTTCATTGGCACGAAAAAATATcgttaatttaaaaaaaaaa
atttaattttaaggattttggCAAGATGTTGTTCCCACTTTACCTGACGC
AAGTTTTGACGCCATTTTGTATGACACTTTTCCCTTGTCGGACGACACGT
GGCATACACATCAATTCGAATTCATCAATGGGCATGCGCAAAGGCTACTC
AAACCAGGTGGTATTTTGACTTATTGCAATCTAACATCATGGGGAGAAAA
TTTAAAAGGGCAATATGATGATATCGAAAAAATGTTCCGAGAAACGCAAA
TTCCGAAATTGGAAGAAGCAGgatttaaaaaggaaaatatttcttggagG
CTTTTGGATATTGTTCCAGAAAAAGAATGCAGATATTATCAATTTAACAA
AATGTTGGCACCAACTTGTGTCAAAAAATAAACTGTATATGACCTCGTGT
TAAAAGGGCACTAGCTTTGTTAATATTGTTTGTCATTGATATCTACTCTA
CGTATTTTTCTTTATGTaactttgtatatttttttttttcatttttgaca
gcaaagatattcttcatttttcttaatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032799XLOC_032799Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051792-exon-scaffold_205-1491911889:22388..22627TCONS_00051792-exon-scaffold_205-1491911889:22388..22627Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1510915933:22388..22627TCONS_00051792-exon-scaffold_205-1510915933:22388..22627Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1575043694:22388..22627TCONS_00051792-exon-scaffold_205-1575043694:22388..22627Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1491911889:24242..24507TCONS_00051792-exon-scaffold_205-1491911889:24242..24507Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1510915933:24242..24507TCONS_00051792-exon-scaffold_205-1510915933:24242..24507Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1575043694:24242..24507TCONS_00051792-exon-scaffold_205-1575043694:24242..24507Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1491911889:30956..31162TCONS_00051792-exon-scaffold_205-1491911889:30956..31162Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1510915933:30956..31162TCONS_00051792-exon-scaffold_205-1510915933:30956..31162Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1575043694:30956..31162TCONS_00051792-exon-scaffold_205-1575043694:30956..31162Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1491911889:31677..31835TCONS_00051792-exon-scaffold_205-1491911889:31677..31835Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1510915933:31677..31835TCONS_00051792-exon-scaffold_205-1510915933:31677..31835Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1575043694:31677..31835TCONS_00051792-exon-scaffold_205-1575043694:31677..31835Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1491911889:32317..32469TCONS_00051792-exon-scaffold_205-1491911889:32317..32469Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1510915933:32317..32469TCONS_00051792-exon-scaffold_205-1510915933:32317..32469Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1575043694:32317..32469TCONS_00051792-exon-scaffold_205-1575043694:32317..32469Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1491911889:40622..40817TCONS_00051792-exon-scaffold_205-1491911889:40622..40817Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1510915933:40622..40817TCONS_00051792-exon-scaffold_205-1510915933:40622..40817Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1575043694:40622..40817TCONS_00051792-exon-scaffold_205-1575043694:40622..40817Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1491911889:41142..41303TCONS_00051792-exon-scaffold_205-1491911889:41142..41303Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1510915933:41142..41303TCONS_00051792-exon-scaffold_205-1510915933:41142..41303Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1575043694:41142..41303TCONS_00051792-exon-scaffold_205-1575043694:41142..41303Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1491911889:41701..42216TCONS_00051792-exon-scaffold_205-1491911889:41701..42216Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1510915933:41701..42216TCONS_00051792-exon-scaffold_205-1510915933:41701..42216Clytia hemisphaericaexon
TCONS_00051792-exon-scaffold_205-1575043694:41701..42216TCONS_00051792-exon-scaffold_205-1575043694:41701..42216Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:22388..42216 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.2674	49.1384	32.4603	47.5854	19.9679	17.2141	21.8882	24.3458	8.74205	8.62479	6.54863	7.2917	16.1117	18.9801	14.1441	16.4379	18.9608	19.6575	17.1135	11.1331	9.69568	13.7745	35.169	27.4656	59.0892	33.2565	19.3486	15.1979	11.6313	15.5535
Blast
[Close]
BLAST of TCONS_00051792 vs. Swiss-Prot (Human)
Match: GAMT (Guanidinoacetate N-methyltransferase OS=Homo sapiens GN=GAMT PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.000e-97
Identity = 139/227 (61.23%), Postives = 171/227 (75.33%), Query Frame = 3 
Query: 1065 IFDKAEDCRPEWTNAKAEFDDVDEHLVICGKPVMERWETPYMHALADIAASRGGRVLELGFGMAISGSRIETYKVDEHVIVECNDGVFEKLKVFAKNAPNKVTPLKGFWQDVVPTLPDASFDAILYDTFPLSDDTWHTHQFEFINGHAQRLLKPGGILTYCNLTSWGENLKGQYDDIEKMFRETQIPKLEEAGFKKENISWRLLDIVPEKECRYYQFNKMLAPTCVK 1745
            IF   E+C P W  A A +D  D HL I GKPVMERWETPYMHALA  A+S+GGRVLE+GFGMAI+ S+++   +DEH I+ECNDGVF++L+ +A    +KV PLKG W+DV PTLPD  FD ILYDT+PLS++TWHTHQF FI  HA RLLKPGG+LTYCNLTSWGE +K +Y DI  MF ETQ+P L EAGF++ENI   ++ +VP  +CRYY F +M+ P   K
Sbjct:    9 IFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTK 235
The following BLAST results are available for this feature:
BLAST of TCONS_00051792 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAMT5.000e-9761.23Guanidinoacetate N-methyltransferase OS=Homo sapie... [more]
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