TCONS_00051798 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051798
Unique NameTCONS_00051798
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2439

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051798 ID=TCONS_00051798|Name=TCONS_00051798|organism=Clytia hemisphaerica|type=transcript|length=2439bp
TTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGA
AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA
ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA
TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC
CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA
ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA
TGGAAGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACT
GAGTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATC
ATatttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGG
AAAGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATC
CAATCAGCATTCTATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAAC
TACCTGAATCTTCTTACATGACTGCTCAATTGATGGACTTTGAAACTGGT
GACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATAC
GCTGAAAAACCCTAATATAAAGTGGAGAATTGACAGAACTCAGCGTAAAG
AAAATGGTGTGGAATTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCA
TTCGTTTGGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGAT
ACTTATAAACACACCGACTAGAAGGATTTCATTTTTGTCATACCATGAGA
AGTCAAATAACCAGAAAGTGGACTTTATGGAGAATGTAACAGTCAAATCT
TTGTATAATGTCTGGCATTAAAATGTCCTTTTGCAAACAATAGACAATGA
AAGGCATTCAAATAGAATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGT
TAATGGAAAATTATTCccatttcaattttgtttgtgtttacctttaaaag
gtaacatttttaaattgtttttgtttcatttagaaatattttaagactgt
ttttcgATATGAGTATTAAGTTTCTATGATATGATTGAAATGACATTTTA
GTCCATTTATGACGTTGATGTTTGACAAAGCTTTTCATGTGAAAGCTGTT
TTAACTTGAAGCAATGAGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAA
AGATCACGTGATTATACGCCTGACTATAAAATAAGATTTTATATGATAAT
ATAATTATTAATTGGACATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTT
GTTGAGTACTCCAAGGGGatgtaccgggtgcgccaaaaaaaagtatacaa
agtGTACAGTATAGTAGGCCTGATTGGTGCTAAAAGAAGTTTCTTGGTTA
AAATAGTGCAAATTTGGAAATCGAATAACTCCCGCTCAGTACAGAAATCG
GCCATTATCGTCTGCTATATAATTCTTCGAAAGCTTTAATTGGTTTTGGT
CTAAagtgagtttgaaatttccgaaaaaaaattagacTCTTGGGTTGTAG
CCTGGTTTTTACGAAATGGGTCAGGAAATAACGGCTATACCCTTTTTTAC
TTCTGACTCGAATTTAGAGCTTTGGGTTCcaaattttcacgatttttatG
TTACCAGTTGGGCTATTACTAGCTACtattagcgttttatctaggaAATA
TAAGAAAGATTTTAGCCTTatgattttagtttcaattagCAAAGATGTGC
CTACCCCCTGGTTTGGTACATGTGATTATTATAGCAAGTTGAACCAATTA
GTGATAAGTGAGGCCTGTTGTACGAAAAATCCTGTGgtctcaaatcaaat
ttttataatcAGCTTATaattaaaaacaagataaaacttaatccgaaaat
tgattttgccatGGATCAATGTGGAGTCagatcacaaacaacaaaatttt
cattttttgaaaaaactaatattTCGCTTATCAACAAAAGCATCGTCAGT
GTGATAGTAATACTGAAAATGTTGAAcaaatttctagaaaaatcaACTAG
CGGAACAAATTCAAGTCTCTAGAGTCCTTTTCCAACGTTGTTTACGAGTT
TAAATGTCCTGGATGCTCTTCCAAATACATGGGAAAAAGTGATCGTACCC
TATCTTGTTTTCTATACTGTTTGAAGAAGAGTGTTTGAGCTGACATAAAA
AGGTTTTTGTTTGACGTGGTGAGCGTACAAACatctattatttttttcat
agaattaTTTTATGCTTTCTCAATTATTGAGACGACtttgtaaattttgt
agtttatataggaagaaagaaatttgtaaaaaactaGGCGTTATTTTATT
GagaattcgaaaaataaaatttatatggTAGTTATAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_205:24202..40171+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051798 ID=TCONS_00051798|Name=TCONS_00051798|organism=Clytia hemisphaerica|type=transcript|length=15970bp|location=Sequence derived from alignment at scaffold_205:24202..40171+ (Clytia hemisphaerica)
TTTTAAATTATCGAGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGA
AATCGAGGCTTTCGTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAA
ACACTACATTGTATCTTTCAATGATGGTGTACTTATCACAGATTGTCCAA
TCTCTCTGCATCAAATATGAAAGTGAGCATTACAGGAGACTTCAAGACAC
CTTGATTGATGGTAAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGA
ATGATATCTGGCCAGGCCCTTCATGGTCATCTCTTGAATATAATGGACAA
TGGAAGGTAATATTATATCAAAACTTCTatagttgatgctctctaattcg
attggATTGGATTTTAATCCaataagggagcgtattgaATAATAGATTTT
TATGTCGTCTGTGACTTTTAATATTATCGAGTAATGGAGCgcatcgaata
gtagaaagtcgaataagagagcatcaactatatttttttttatttcattt
ataaccgtattacttcaaataatgcccccttcttttaaacgcccctcaaa
taaacgccctctTTGAATAAACGCCTCCCCACTAGGAAGGGCGTTTACTT
CAATGGGATTAATTtcgtggggattaaatttcgcggtttagcTCATCTGC
GAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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ggcacctaagagtaatgtagcatctttaatggtaaatctTTTTGGTTTGT
CGTTatacttctcagtgcgttttagacattaatgatatgcccttgataat
acacttgcattataaaatcattgtaaaggagagatcaacaataagaaatt
taaacaagcacaaaatggctgggctgaaagaactcaaaaattaataaagt
gcctcgaaatgccttcactACATTTCagtgaatttttttagaaatcaatg
aaaaagtacatcaagataatactgtgaaaatttaaagccagcaccaaaat
ttatcattcaaactgacaggaaagttgtgagagtaagtaagtatttattt
atcatttaacactacaaaaaagatacaagtgatgatatgcacaaaaaata
tatgaagggagaccgccttatagtctagctaatcaaaaagatgcggccac
ctaagtACAGATTGcgtttataacacttcatgaattatttataaatattt
atatatcttgaatatagttcttataattttaaatctggcgaaaaactatt
gtttccacaaaatacccctagaatatgtccaaaattacttcaagtgttct
attgggtacagattaagatatctagcaatgagaaaactttttttgaagga
aaataataAACTGACAATCTTGATGCTCTGATAAAGGtcggagacagaga
tagaacagcaattaactgaaaagacaatgcggtacatattccagccgcgg
ttTTTTTATATACTATGGTTTCTCTTCAATGTCTTCTTTCCTAGTACACA
ATTATTCTTTTCAATGATTTCATTTGGCCTTCTTGATAGACCGTTAAAAA
ATTTCTTCGTATGCAAACTACGGATGTGGCAAATCATTCCTTCTACAAGA
ATGCAAGTTGATGTATTCGTTCTTTTTATAAAGTTTGACAGAGAATAATT
ACTTGTGGTTTTGCTCTTTTGCTCCCTTTTAACCGTTCAGAATTCCCTTT
TGACAAATTTGATGCAATGATTgatgttatctttttttctctttcattgC
ATCCTGTGTGAGATGtaatcataatttttttgaattagcCCGATATATGC
TATTTTATATGAATGGACTCGAATGACATACTggccaaaatataaaaaat
ataccgTCAACTTATTTGTAataaatggctgtaacttttgatagaattcg
aatcaagttgcggttGTGTGCTCGTTAAatagatattcgtgagtggaata
ttatcaagtaaaaaaattgagatttagggcattttccaaacatttttatA
TGTACTTAATGGTCAATGGTTCTTCGTCGTTGCTCAAGATTTTCAGAAAC
ACACCATATATTTACATATACACgaacgtccaaagttttgaagcgttcgg
atgttcttaacattttgagttttaagcctaaaaatgttcttagcatgttc
ttattttcgtcatttttgataactttgtcCATTTGCCTataaaattgggt
gttttacaGTCCGCGAAGCCTAacattcttaacttgttcctaacattttg
gtcatcgaagccttatgtatgttcttatatagttttagAAAGTTTTAGTC
AAGTAGATCAGCTAATTTGACATTGAATTATGTCACTAATATGTGAAAAT
AGTCAATATAGGAGATTTTTGTCctgaaaaagaaacattttcaatCCATT
CGGCTCTTTCCTCTGTGAAAACTTACCTTTATGCCTAATCATGATATTTG
TAGAAATTGTTCGCAGTGTTCTTTATCGGCaagtatttttctttctgttt
acaGATTTTGCATTATGACGTTGAGAAATTCTTTGCACCAACCTCACTGA
GTGCTTACCGTAACAAGGATTCCATTGTTGTCAACATTGTGCGAGATCAT
atttcaaatgagaaaaaactgCTGTGCAATATCTCATTTCACGATTGGAA
AGAATTTGGTATTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATCCA
ATCAGCATTCTGTAATCTATCGTTACTTTTATTTGTTTCTTGATTTATAG
GGGAATACAAGCATTGCTACGGATGAGAAACAGCTGAGGGCTAAAAAGGA
ATCTTAAGATACCTTGGATTTCGGCTTATAGATTTAATCTAGAGCCTTTT
TTATTTATGTACACATTTTCAAGAGGATAGGACCTTCGCCTCTAGCCTAT
GGCTATATCTCACCGATTATTACAATATATTTCGGTCGATTTTATCTTAT
CTCAGATGGTAAATCTTGAGAAGTGATAAACTTCATTCCCTAGCTTACGT
TCACTTAAAGTTTTAACTAACATCAATGGTTCCCTGTTTATCCTAGTAGA
AAGGTCAAATTCTTATCTCAAAATTCCCATTTTCAGTATCTGTCTATGTT
GATTTAAGAGTGCACAGTGTTAAACCTTTTGAAATGCACTTTGCATCTGT
ATAGAAAATGAAAGATTGCTGTCACACCCATTACTTCGTGAGCTTTCCAG
TTTATGattcttgaaaatgttttagATTGAGATCTTTCAAAAGAGCATAA
CCGAGTTGCAACTACCTGAATCTTCTTACATGACTGCTCAATTGATGGAC
TTTGAAACTGGTGACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTT
CTCTGGTGATACGCTGAAAAACCCTAATATAAAGGTACTTACTATATaga
tattttccttttttatgaGCAAAGGTCATGAAACTAGGCATATCTTATGA
GCACTAGAATTAATCTCGTTTCGATAGCCTTGATTCACTTGATTATattt
tgataactgaaaattaattcacgTAGGAATAGGAAAACAGCTCAGACCTA
CTTATCGAGGATATCTTGGTCGGATTATGATTCAAATCTATAGAGTTTTT
GTCTACAATTAAGTAATAAATAATCTTTTAATTATGTCTTCAAATTCTTC
ATGCAACAGAATTCTGGCtggaaaacttttttcgctaCCCAATGCTTTTG
ATTTGAAACccaattagaattttttttcgtaaAAAATGATATCAAACATG
AGGAACTTATGCATCTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTA
TAATCCCAAAAGAATCcctaaatttgataccttcttactgatcaaaatat
attttctctaTTTAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGG
TGTGGATTTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTT
GGCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATA
AACACACCGACTAGAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTT
AAATGACCAAAGCGTCTGTTttatatacacccctgtctcacaaccctaGT
GAAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaa
ttctattgttcttagtTCAAAAACTCCAGTGTATTTTAAATACGGACGAA
GCAAATCAATTTTACAGTTGTCTGAAATTGTAGggaattttttcccaccg
gggacgaagttttgtccaaattttccgGTGGGGTTAGAGTGGGGGTgtca
ccgggtctgtgacacatgggTGTTGTTTACCGATCTCGATATCCTTTTCT
GTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAAA
ACAAACACACAAAGTGtgtgaatattttgaaagtaatCTATAAAACAGAA
AGGTCTTGAACTCCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGTC
ATTTTTATGAATGAACTTATTATCAATGGACCCGTTTTCAGAAAACTATG
AGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAAG
CTTAGAATATTGAGTATTGTGAACACTTTCATTTATTTTTCCGAATTTTT
CAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAATG
GAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGTC
ACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAAAAATAAGcattgat
ttcaaatatataATTCTGTGACGCCAATTTCCATAACTTGAACACGCGCG
GGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGTT
GACTGAAGGGACAATGAAACTTGgtcgagttaaggaaacatttgagttat
agaggatcgagttaaagagactccgctGTGCTCATGGCCCCCGTCACCAG
GGGAGCCAGGGGGNTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTAT
AATCCCAAAAGAATCcctaaatttgataccttcttactgatcaaaatata
ttttctctaTTTAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGT
GTGGAATTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTG
GCTAGATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATAA
ACACACCGACTAGAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTTA
AATGACCAAAGCGTCTGTTttatatacacccctgtctcacaaccctaGTG
AAACTTCTTCCCATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaat
tctattgttcttagtTCAAAAACTCCAGTGTATTTTAAATACGGACGAAG
CAAAGTCAATTTTACAGTTGTCTGAAATTGTAGggaattttttcccaccg
gggacgaagttttgtccaaattttccgGTGGGGTTAGAGTGGGGGGTgtc
accgggtctgtgacacatgggTGTTGTTTACCGATCTCGATATCCTTTTC
TGTTACTCGCAGTAAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAA
AACAAACACACAAAGTGtgtgaatattttgaaagtaatCTATAAAACAGA
AAGGTCTTGAACTCCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGT
CATTTTTATGAATGAACTTATTATCAATGGACCCGTTTTCAGAAAACTAT
GAGCTTTGGAAAATATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAA
GCTTAGAATATTGAGTATTGTGAACACTTTCATTTATTTTTCCGAATTTT
TCAAAGCCTTCCCAGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAAT
GGAAGTCGTGACCTGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGT
CACTAGGGATGTTCAGACGTAAAGTAAAGTACTCAAAAAATAAGcattga
tttcaaatatataATTCTGTGACGCCAATTTCCATAACTTGAACACGCGC
GGGGAACAAAGATTTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGT
TGACTGAAGGGACAATGAAACTTGgtcgagttaaggaaacatttgagtta
tagaggatcgagttaaagagactccgctGTGCTCATGGCCCCCGTCACCA
GGGGAGCCAGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccaatattttgcaaag
tattttttttttactttagaaaatcttatatataccgtttagaggggtga
aataagggtaaaaagtcgaaaattttcttcgtcgcccatccggtgggcga
catttttttttggccccctcaattcgatttgcacgccgggggccatgcTA
TGAAAATTGGTttacatcaaaaaatttctgCACAAAACCTCTTTTTGTTG
TAAAAAACTTAGTTAATAATCGGTATCTTGACAAATTAATTCTGAAGACC
AAATTATTTTAAAGTCACAGTCTtgtcaaaatataattttgtgaTATTTC
TTTTTATAGATTTCATTTTTGTCATACCATGAGAAGTCAAATAACCAGAA
AGTGGACTTTATGGAGAATGTAACAGTCAAATCTTTGTATAATGTCTGGC
ATTAAAATGTCCTTTTGCAAACAATAGACAATGAAAGGCATTCAAATAGA
ATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATGGAAAATTATTC
ccatttcaattttgtttgtgtttacctttaaaaggtaacatttttaaatt
gtttttgtttcatttagaaatattttaagactgtttttcgATATGAGTAT
TAAGTTTCTATGATATGATTGAAATGACATTTTAGTCCATTTATGACGTT
GATGTTTGACAAAGCTTTTCATGTGAAAGCTGTTTTAACTTGAAGCAATG
AGCCTGGAGAGGAGGTTCTTCCAAATATGAAAAAAGATCACGTGATTATA
CGCCTGACTATAAAATAAGATTTTATATGATAATATAATTATTAATTGGA
CATATTGTGCTTCTTGGTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGG
GGatgtaccgggtgcgccaaGAAAAAGTATACAAAGTGTACAGTATAGTA
GGCCTGATTGGTGCTAAAAAAGTTTCTTGGTTAAAATAGTGCAAATTTGG
AAATCGAATAACTCCCGCTCAGTACAGAAATCGGCCATTATCGTCTTCTA
TAGTCTCCTATATTATTCTTCGAAAGCTTTAATTGGTTTTGGCCTAAagt
gagtttgaaatttccgaAAAAAGATTAGACTCTTGGGTTGTAGCCTGGTT
TTCACGAAATGGGTCAGGAAATAACGGCTATacccttttttggacctacc
ccggtggggtggaggtcctataaattaacccgtgttcgttagttagttag
ttagttaccaacttttctcgagattggctcatNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNcccccccccccaatattttgcaaagtat
tttttttttactttagaaaatcttatatataccgtttagaggggtgaaat
aagggtaaaaagtcgaaaattttcttcgtcgcccatccggtgggcgacat
ttttttttggccccctcaattcgatttgcacgccgggggccatgcTATGA
AAATTGGTttacatcaaaaaatttctgCACAAAACCTCTTTTTGTTGTAA
AAAACTTAGTTAATAATCGGTATCTTGACAAATTAATTCTGAAGACCAAA
TTATTTTAAAGTCACAGTCTtgtcaaaatataattttgtgaTATTTCTTT
TTATAGATTTCATTTTTGTCATACCATGAGAAGTCAAATAACCAGAAAGT
GGACTTTATGGAGAATGTAACAGTCAAATCTTTGTATAATGTCTGGCATT
AAAATGTCCTTTTGCAAACAATAGACAATGAAAGGCATTCAAATAGAATT
TGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATGGAAAATTATTCcca
tttcaattttgtttgtgtttacctttaaaaggtaacatttttaaattgtt
tttgtttcatttagaaatattttaagactgtttttcgATATGAGTATTAA
GTTTCTATGATATGATTGAAATGACATTTTAGTCCATTTATGACGTTGAT
GTTTGACAAAGCTTTTCATGTGAAAGCTGTTTTAACTTGAAGCAATGAGC
CTGGAGAGGAGGTTCTTCCAAATATGAAAAAAGATCACGTGATTATACGC
CTGACTATAAAATAAGATTTTATATGATAATATAATTATTAATTGGACAT
ATTGTGCTTCTTGGTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGGGGa
tgtaccgggtgcgccaaaaaaaagtatacaaagtGTACAGTATAGTAGGC
CTGATTGGTGCTAAAAGAAGTTTCTTGGTTAAAATAGTGCAAATTTGGAA
ATCGAATAACTCCCGCTCAGTACAGAAATCGGCCATTATCGTCTGCTATA
TAATTCTTCGAAAGCTTTAATTGGTTTTGGTCTAAagtgagtttgaaatt
tccgaaaaaaaattagacTCTTGGGTTGTAGCCTGGTTTTTACGAAATGG
GTCAGGAAATAACGGCTATACCCTTTTTTACTTCTGACTCGAATTTAGAG
CTTTGGGTTCcaaattttcacgatttttatGTTACCAGTTGGGCTATTAC
TAGCTACtattagcgttttatctaggaAATATAAGAAAGATTTTAGCCTT
atgattttagtttcaattagCAAAGATGTGCCTACCCCCTGGTTTGGTAC
ATGTGATTATTATAGCAAGTTGAACCAATTAGTGATAAGTGAGGCCTGTT
GTACGAAAAATCCTGTGgtctcaaatcaaatttttataatcAGCTTATaa
ttaaaaacaagataaaacttaatccgaaaattgattttgccatGGATCAA
TGTGGAGTCagatcacaaacaacaaaattttcattttttgaaaaaactaa
tattTCGCTTATCAACAAAAGCATCGTCAGTGTGATAGTAATACTGAAAA
TGTTGAAcaaatttctagaaaaatcaACTAGCGGAACAAATTCAAGTCTC
TAGAGTCCTTTTCCAACGTTGTTTACGAGTTTAAATGTCCTGGATGCTCT
TCCAAATACATGGGAAAAAGTGATCGTACCCTATCTTGTTTTCTATACTG
TTTGAAGAAGAGTGTTTGAGCTGACATAAAAAGGTTTTTGTTTGACGTGG
TGAGCGTACAAACatctattatttttttcatagaattaTTTTATGCTTTC
TCAATTATTGAGACGACtttgtaaattttgtagtttatataggaagaaag
aaatttgtaaaaaactaGGCGTTATTTTATTGagaattcgaaaaataaaa
tttatatggTAGTTATAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032799XLOC_032799Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051798-exon-scaffold_205-1491911889:24202..24507TCONS_00051798-exon-scaffold_205-1491911889:24202..24507Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1510915933:24202..24507TCONS_00051798-exon-scaffold_205-1510915933:24202..24507Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1575043694:24202..24507TCONS_00051798-exon-scaffold_205-1575043694:24202..24507Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1491911889:30956..31162TCONS_00051798-exon-scaffold_205-1491911889:30956..31162Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1510915933:30956..31162TCONS_00051798-exon-scaffold_205-1510915933:30956..31162Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1575043694:30956..31162TCONS_00051798-exon-scaffold_205-1575043694:30956..31162Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1491911889:31677..31835TCONS_00051798-exon-scaffold_205-1491911889:31677..31835Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1510915933:31677..31835TCONS_00051798-exon-scaffold_205-1510915933:31677..31835Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1575043694:31677..31835TCONS_00051798-exon-scaffold_205-1575043694:31677..31835Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1491911889:33566..33718TCONS_00051798-exon-scaffold_205-1491911889:33566..33718Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1510915933:33566..33718TCONS_00051798-exon-scaffold_205-1510915933:33566..33718Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1575043694:33566..33718TCONS_00051798-exon-scaffold_205-1575043694:33566..33718Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1491911889:38558..40171TCONS_00051798-exon-scaffold_205-1491911889:38558..40171Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1510915933:38558..40171TCONS_00051798-exon-scaffold_205-1510915933:38558..40171Clytia hemisphaericaexon
TCONS_00051798-exon-scaffold_205-1575043694:38558..40171TCONS_00051798-exon-scaffold_205-1575043694:38558..40171Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:24202..40171 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.241378	0.132532	0.336548	0.185687	1.22146	0.548655	0.912808	0.766132	0.761181	0.515069	0.461241	0.492907	0.438819	0.772673	0.426132	0.376614	0.608601	0.343292	0.533413	0.296329	0.960389	0.664473	0.58316	0.718723	0.685219	0.550642	0.81187	0.391156	0.758915	0.956988
Blast
[Close]
BLAST of TCONS_00051798 vs. Swiss-Prot (Human)
Match: MANBA (Beta-mannosidase OS=Homo sapiens GN=MANBA PE=2 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 1.569e-34
Identity = 88/282 (31.21%), Postives = 148/282 (52.48%), Query Frame = 1 
Query:   40 GNMEIEAFVRQHFELPRSSKNTTLYLSMMVYLSQIVQSLCIKYESEHYRRLQDTLIDGKGHTMGALYWQLNDIWPGPSWSSLEYNGQWKILHYDVEKFFAPTSLSAYRNKDSIVVNIVRDHISNEKKLLCNISFHDWKEFGILWNKTWLLDLSSNQHSIEIFQKSITELQLPESSYMTAQ--LMDFETGDVVSSTELFLSNFSGDTLKNPNIKWRIDRTQ----RKENGVEFDVILSLDAPSAFVWLDTPN-RGRFRENGILINTPTRRISFLSYHEKSNNQ 864
            GN ++      HF+LP+S+     +    +YL+Q++Q+ C+K E+E YRR +  ++D +GHTMGALYWQLNDIW  PSW+SLEY G+WK+LHY  + FFAP     + N+++  +  V D + ++  +  ++  H W     + ++     +     ++ ++++ ++EL L      T +  ++ F     +S+    LS  +   L +P     + + Q      + G  F   L   A + FVWLD  +  GRF +NG L+   TR I F  +   S N+
Sbjct:  591 GNKQMLYQAGLHFKLPQSTDPLRTFKDT-IYLTQVMQAQCVKTETEFYRRSRSEIVDQQGHTMGALYWQLNDIWQAPSWASLEYGGKWKMLHYFAQNFFAPLLPVGFENENTFYIYGVSD-LHSDYSMTLSVRVHTWSSLEPVCSRVTERFVMKGGEAVCLYEEPVSEL-LRRCGNCTRESCVVSF----YLSADHELLSPTNYHFLSSPKEAVGLCKAQITAIISQQGDIFVFDLETSAVAPFVWLDVGSIPGRFSDNGFLMTEKTRTILFYPWEPTSKNE 865
The following BLAST results are available for this feature:
BLAST of TCONS_00051798 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MANBA1.569e-3431.21Beta-mannosidase OS=Homo sapiens GN=MANBA PE=2 SV=... [more]
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