TCONS_00051810 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051810
Unique NameTCONS_00051810
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3204

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051810 ID=TCONS_00051810|Name=TCONS_00051810|organism=Clytia hemisphaerica|type=transcript|length=3204bp
CTACCGAAGAATATGCACTGAAAACACCATCCAAAGATTACCATTTAGTA
CTAAAACCTTCCAGCCATATCATTGGCCCGAACCTTTTCGAAGATGAGAA
AAGTTGGGAACAAGAAAATTGTCATTACCAAggattggaaaaaaattttg
gtggaCAAGTCCTTCTTTCAACCTGTGGTGGAACGTTGAATGGATTGTTG
GTGGAcggcaaacaaaacaaaacgtaTATGGTGGAATACGAGGAAAGCCT
TGCGAATCACATCGTGTATGAAGTTGACAAATTACCACAAAACAAACGAA
TCACCATGGCAACTGATATCCAAAGAAATGAAATTACAAAAGTTGAAGGC
GTTAACATCAAAGCAAACCACAGAGCGCGTCGAGACGTTTCAGTGGACGC
ATCAGACGTTTCAGTGGACGCATCGGACGTGGAGAAGTATGCTTCATTGG
TCATGGTGGTCGACAATTCAGCCTTCGTGCATCTTGGCAGCGATAAAACG
AAAGTGATTCATTTTGTACTGGCTATTGTCAATCACATGGACTTTTTATT
TCGCCAAGCTAACATACACGTCATTCTGACCCATCTTGAGATTTGGGATG
TCAGTGACAAATTCACGGTGACGGCAACAACAAGTGACAATCTGAACCAC
TTCACCCAGTACAATAAAGATATCATGATCAACCAAAATGGATGGAGGCA
TGATAATGCTCATTTCTTAACTCATGTAGACCAACAAGGTGGTTTGGTTG
GACTTGGAGCCGTTGGCAGCATTTGTGGTCAAGGTGGACTTTCACAAGCT
ATGTCTCAGATTTGGAGTGACAACCCTTTGATAACAGCTGGTACGGTTGC
CCATGAGTTTGGACACAATGTTGGATTATACCATTTTACATCAGAATGCA
TTTGTGATAACCCACCCTGTCTCATGTCTTCATATGCAAATTGGTCACCA
GTTCGAGGCTTGACAGATTGTACAAAGAAAGTGATCGAGGATAGATGTTC
ACTTGGAAAATGTTCCTGTTTGACTGACCAGCCTGCTGCGAGTTACATGG
GAGCAACATGTGGAAATGGGATCGTTGAGAAAGGTGAAGATTGTGATTGT
GGACAACCCGAGTACTGCACAAATAAATGTTGTGATGCGTCCACGTGTAA
ATTTCAAACGCATGCACAATGCGCAGAAGGTGAATGCTGTACAGATGATT
GTCAACTGAAAGCAAAAGATGTGCTTTGTAGAGATGCACAGGGAGAATGT
GATTTACCTGAGACTTGTGATGGAAAGCAAGCAACGTGCCCTTTGGATGT
TTACTTGCAAGATTACCAAGATTGTAACTCAAAAACAaGCTATTGTTACA
AAGGAAAATGTACAAAAACGTTGAATGAACAATGTGAAACTCTTTGGGGT
AACGAGGCGGATCACAGCAGAACATGCATCCGAAATTACAAAGGAGACAA
ATTTGGTCATTGTGGAACAGACAAAAATGGAAAGTTTATACCATGTGAAA
CTAAGAATGAATTTTGTGGAAAGGTTCAGTGTCACGGAGATATCGCAagt
catttcattgtttttggaAGAAGTCGATCAACTGCTGTCTATGGAAGTCA
ATGCAGATCGGGATTAACGTATGTTGGGGAGAATATAAATCCAACCATGG
CATTTGATGGAACCAAATGTGATGCAGGAAAGGTTTGTCAAAATCAGCAA
TGTATCGCAACTGATATCGCAAAATCAACTTCGAAGTGTGACGATCGTTG
TCATTTTGGGAGATGTACAAACGTGGGAGCTTGTTATTGTCCACCGAAAT
TCAAATGTCCGGATTGTTCTCGCATGGACCCAAACAATATTAACGGACAG
GTGTGCAGTGAACAACCTTCTCAAACTCATAGACATCATGATGGAAAACT
CAACTGGGAAgAATACTTGGACCTCTTAACAAGCAACTTGTTCTTGACTC
GATGGAAAGCACGTGTTACATTCAAAAATCGTGTGTCGACAGGTGATACG
CTCGATAAATACGTCCCAACAAAGAAAATCGACAGTGTAGACCATGCCAT
AGACAATTTGTTCAAAGATTTAAAAGACATGAACTTAGCACCGACAACAA
CGACGACTACAACAACTACAACGACAACGACAACACCTACAACGACACCA
ACAACGACACCAACAACGACACCAACAACGACACCAACAACGACTACGAC
AGTTGCACCACTTTGCTTGGATGCGGTCGGGATGATCAATATCGGATGTC
GTTCGAAAAGTGGTGGCACAATGATCGCTAACTATCGTAATGCTATGGAT
TGGAATAATCCATCTGACTCAATAGAAAAAATGATTTGTGATTGTGCAAA
GACTGCAAAAGACGATGGTTATGTTGGCTTTGGTTTGGTTTACTGGGGAG
AATGTTGGGGCTATTCAACCAAAGATGAAGCTGTTAACCAATCAGGATCG
ACCAATTGTTCGAATGATCAATATAACTCTTGTGCAGAAGAAGATCGCAT
TTGTATAGGCAAAGCTGATGCCTCGTACGCTTTTTTACTCTGAAGTGATT
ATTATGATTATATGATTTAGCGGAAGACTGCGAGGGAGTTGGTTGCTAAG
TTTTGCGGACCGACAAGTCTACCAACAGAATAGGATCTAACTAACTCGCA
AGTTATCTGTCTCTATAACTCGACGAACAAATCTGCATTCACAATGCATG
ATCGAGTTATAGGGGGTTAACATAGAGACCCCAATGTAATTAACAATACT
TTATTGTTATTACTGGATCTCAGAAAAGAGCTTATTTGTGGTAGATTTTT
AACCCTTAAACTTTATAATAAATTGTAAATATATTATTTAGAATCTGAGA
ATTATAATATGAAAGGAATAAgtttatatattataatatatttttgtgAG
ACAAATTTACATGAGCAGGGCCCTTATAATGAACTGGGATGTGGAGGTGC
CTAAAATATAGTGAATAAGGTGTCAACTTCGATTTCGACCCCCTAGTATG
CCTGAAAATGGCcctatttcaaattttggaatgAAATTAAGTTTTGTAAA
TTATTAATCGTTAtcttaaaaacaactttttatttgagaaaaatgaggAG
GCTATAAACCTATAACCCCGATGGCATGGGCCCTGATGGGTATACTTCAA
TTAAAGaagttttatttctaaaaatgaaaaatatatatgaaaaataaatg
aaaa
Run BLAST on NCBI

transcript from alignment at scaffold_205:208119..219667+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051810 ID=TCONS_00051810|Name=TCONS_00051810|organism=Clytia hemisphaerica|type=transcript|length=11549bp|location=Sequence derived from alignment at scaffold_205:208119..219667+ (Clytia hemisphaerica)
CATCAATCGATAAGATTTCTGTTTACAAAACACATTGATATGTAGGCGGT
GTAGATTTCAAATATTTGCCATGAGTATGAACTATTAGTTTATTCATTTG
TCTAAATGTGTacataagaatatttttggagaaaacCTTCAAATACTGAA
AGTATATCGCTTTCCGTATCGATGTCGACATATGCCGACAAGAGCATTTT
CGATTACTTTGCCGGTATTTGCCGACAAGAGAGGTCTCTACCCATTTGCC
AGaggtttttttaaagtttattgaaagttcgattttgaactagatacacg
tttttttttttattagaacacctaaaatttggctgagcctggatgtgctt
atttttttagcaattttcagcctgaaatgttcttaaNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNatctaaatcgacaatatgatacaaaat
aaagagcacttaaatttggcaaaatttggacaatatttgactctcgactt
ttgaagatccacccctaaattcggttaaaactgcttaaaaagaggaaaaa
attgtagtttcttgacatttttttccaaactgaggctgggcatgttctta
agatgttcttaatgtttcgacgaatttcagcctatatgttcttataaact
aggttctaataaaaaaaaaaacgtgtagcacaTCATCATCACTAATTCAA
CTTTCAAGATACCAAAATCCTTattgaactaaaaaaaaccTTATTACAAC
AAACGAATTTGGGTGTAAccaaaagaatttcttttttttttccctcCAGG
ACACTACCGAAGAATATGCACTGAAAACACCATCCAAAGATTACCATTTA
GTACTAAAACCTTCCAGGTAGATACATCAATTTCCctacatttttattcg
aaatcGTCAAATCTTCACCTTTAAGCCCCGagaaaaaagggcaaaaattc
ATTCAGAGTCGTAGTTATTTTTAACCAagtgaatttatttttcagCCATA
TCATTGGCCCGAACCTTTTCGAAGATGAGAAAAGTTGGGAAGAAGAAAAT
TGTCATTACCAAggattggaaaaaaattttggtggaCAAGTTCTTCTTTC
AACATGTGGCGGAACGTTGAAGTAAGATTACATTTTGTTATTGAGAACAT
Ccgatttttttgaagccttcggatgttcttaaatttttcagttttaagcc
taaaaatgttcttaacatgttcttattttcactattttgtgaccattttt
acctagtttcctaaaaaatcgggtgttttagagtctgcaaagccttaaaa
tgttcttaatttgttcttaaaatttttgccatcgaagccttatgttctta
tatagtttgttcttataaaaaaacgtgtactttgaACTACCAAAAGTTTC
GAACACTTATTTCAACTGATCTATCTATTgtcttttaataattttcattg
tctgttcaaattataaaaatagtgGATTGTTGGTGGAcggcaaacaaaac
aaaacgtaTATGGTGGAATACGAGGTTAGTTAATTTACCAATCTTTCAAA
AAGGGATACACCTATTCTACATGGTGTACCATTTGTTATGGAAGTTATCT
TCTAAGAGTTCACCACTCTCTTCATACAATGCACGTCTTTCATCTCTGGG
CGCAACCGCAAACCAACCATTGTAACACTCAAAGAACCAAACGATATTGA
AAACTGGAGCAAAACGGCATTAACATTTCCTGAATGACATTTCACATATC
ATTTGTTTTCAGGAAAGCCTTGCGAATCACATCATGTATGAAGTTGACAA
ATTACCACAAAACAAACGAATCACCATGGCAACTGATATCCAAAGAAATG
AAATTACAAAAGTTGAAGGCGTTAACATCAAAGCAAACCACAGAGTAAGT
CAAAagattttgggccgaacgtcaATTAACAAAACTTCGTATAAACACAA
ATAATTACTATAGAAATCANTTCAGCCATATCATTGGCCCGAACCTTTTC
GAAGATGAGAAAAGTTGGGAACAAGAAAATTGTCATTACCAAggattgga
aaaaaattttggtggaCAAGTCCTTCTTTCAACCTGTGGTGGAACGTTGA
AGTAAAAATTCTCATATATGTACCGAAAGTTTCGAACACTCGCCGCATCA
GATCTTATTGTCTGATGACAATCTTTATTGTCAATCACCTGTTCAAAGTC
CTTAACAGCAAACTCTAGCCCAGTCCCCTAGTTCATtcttttatgattct
gatagcgtcCATCacatccatcagtaaaatcaaaaagtggtgcaGTGACG
AGATTGCTTATACAggaatcagaaaatatcatGACAATTAATCCTTTTTC
TTTTCCAATAGTGGATTGTTGGTGGAcggcaaacaaaacaaaacgtaTAT
GGTGGAATACGAGGTTAGTTAATTTACCAATCTTTCAAAGAGGGATAGAC
CTATTCTACAAAGAGTTCACCACTCTCTTCATACAATGCACGTCTTTCAT
CTCTGGGCGCAACCGCAAACCAACCATTGTAACACTCAAAGAACCAAACT
TTGGTACTTCTCGAAGCACCAAGACATTTTCTGAAATCTCCAACGATATT
GAAAGTTGGAGCAAAATGGCATTAACATTTCCTCAATGACATTTCACATA
TTATATCTGTTTTCAGGAAAGCCTTGCGAATCACATCGTGTATGAAGTTG
ACAAATTACCACAAAACAAACGAATCACCATGGCAACTGATATCCAAAGA
AATGAAATTACAAAAGTTGAAGGCGTTAACATCAAAGCAAACCACAGAGT
AAGTCAAAagattttgggccgaacgtcaATTAACAAAACTTCGCATAAAC
ACAAATAATTACTATAGAAATCATATTTAACCTCCCAGTGCAATCTCATA
CACAGAATTATATTCCAgcactttttgtttttaatgataATCCATGACGC
ATGCGCTCCGAGGGAAGGGGGGACTCAAGTTAAACGACCGCACGTGCAGT
CTATAAGGGTGTGTTTTTTGGGCTTTTcaaagtacactgtaagggtcgaa
atgagagAGAGTGTACTCTATGTGTATAAAAAGTTAGGAACACGAATTTC
TTATGggtaaaaatctgaaaaaacttatcttttttttttgctttaaatgg
aCAGACAAAAGAAATTCCACCCTAAAGGTCGATCTTTACCCATATTTACT
CAAGCGAAGGGAAGGACTGTTATGAATGTGCATCCAGTTGAATAGCACGG
TAAAGAGTTctgattttaaattaattttcagGCGCGTCGAGACGTTTCAG
TGGACGCATCAGACGTTTCAGTGGACGCATCGGACGTGGAGAAGTATGCT
TCATTGGTCATGGTGGTCGACAATTCAGCCGTAAGTAACACAATGGGTTT
CAATgggtttcattttttattgtcgAATGGAGTCGTAGAGAATTATATAT
AATAGAGAGTAACTAACACTGGATAAAATTAGCTAATATATGTCCTTCAT
GTTTCCTTATTGCAACCAACTTACTtacaaaatttgatttgaatgcGATT
TATCAGATATTAGCGATGTGAAAGTCTCGCTAATTGCAATCTCAGCCAGG
TTCTTCTCAGTTGACGGGTCTGATGATTGATTGAATTTGATGGTTGTGTG
ATAACAAACTTTGTTCTCTACTATTTAGTTCGTGCATCTTGGCAGCGATA
AAACGAAAGTGATTCATTTTGTACTGGCTATTGTCAATCACATGGACTTT
GTAAGTAAAATAAATCTCAACGAAATATACATACTAACAAAGGGTGGACG
AATGAAACAAACTTGAAAAGAGAATTTGGAATAAGGCCTTGATATTATTC
AGCTTTAAACCTATctactactttaggcgtacgaactttcgcaagcagaa
actttcgcgaggtcgaaaaatcgcgaaattcacgacatttacttttgcga
atttgaggataaaaatgagaattctcGACTTTAAAAGGGCATTAAAGGAT
AATAATATGCCGAAAATTTGATGtttattacgatttcgaggTTTCATAGA
TTTCcaacttttttgagaatttttcacaagcataaactttcgcgaattgc
cctgtttagaattttcaaagacatttactttcgcaaaaaacgccgaaaat
cgcgaaaatcgcgaaagtttctgatcgcgaaagtttgtacgcctaaagta
ttctaTATACAAGTTTCGAGCATTTCTCTTCAGGTCCTTTTTTAAGCTTG
GCAGTTGGTTCgtttttattctaaattttattcatttataCTTTTCAGTT
ATTTCGCCAAGCTAACATACACGTCATTCTGACCCATCTTGAGATTTGGG
ATGTCAGTGACAAATTCACGGTGACGGCAACAACAAGTGACAATCTGAAC
CACTTCACCCAGTACAATAAAGATATCATGATCAACCAAAATGGATGGAG
GCATGATAATGCTCATTTCTTAACGTAAGAAAAATATGAACTAAACTTTT
ACCAAGCTTGACGAGTAGAAAGTCCAACTAGAATCGATATTTGACGTTTA
CATAATTATAGTCTTTTGATTGCCTTCACGAGGCCCACAGTCAGCCGGTT
CCGACTATCTATAGACTGAACGAATCATTGGAAGGAACAGGGATGAGAAC
AGGGAGCTCCTTATTGTGGCGCTGATACCACTTGACTATCCCTTCCATGT
TCCATTTCTCTATCACCTTAAGAACTATCCGTTAAATTTGCTTTCAAAAA
AGTGTGATCTAGTGGTTACGACAGTCGTGAGCTCTCCCAGTTGTCTTTGA
TTCACCTCTGATTCTTCAAGTCACGTGGTAAATATCGCTTTTTTGCACGG
TTCTTCATCAACATGAGTATTAAATGAATAACCGATCAGAACGAAAAATT
TCTCAGCATTTCTCATTATTCTTTGCATCACATTTTCTAGTCATGTAGAC
CAACAAGGTGGTTTGGTTGGACTTGGAGCCGTTGGCAGCATTTGTGGTCA
AGGTGGACTTTCACAAGCTATGTCTCAGGTACAATTTATTCATTTTACAT
GAGCTAGAAACCAGGGGTACTCAAGACTGCCGGAGCCGGAGGAGTTAGGA
AAATAAACCCACTTTCAAATCTCCTTTTCAAAACGATGCAATGTTATCAG
AATAAAATAAGGCTTGAAGTGATTTTATCTAGTCGGTctagatgaaaaaa
tattaaatttaacgaatcaaatattttcaatcgGAATTTAAACCGTATGG
GTGATGCAATATCCATCCTAAAAATTACACTTTCTTGTTTATCGTATCAC
TTATATTAAAGCAAAAAACAACATCCTTTTATCACGAGAAATTCTTCTTC
AGTGAGCGGAAATACcaaaagatttcttttaaatCGCCAAGCAACACTGT
AAAAACTCCTAAGATCCATATTTTGTCACTGCATGACAACGTTTAACAAC
GAAAAACCGACAAAAAAGAGCTAACGCCGACGGGCAAACCATCAAACATA
CACGCCCTCTCCTTACTTTTCCGGTATTCTGATCACGAATTCGTAAAATC
ACAAACTTTTTATAATGCCTTcttgaaaaaggtttgaaattttcgaaata
atGTCAAACAAATCAACTTAAAGAGCTTGATTTCAAGAGCAGCGACATAG
GGCGGTAGTTAAAAGATAATACATTAAAGAGACGAGTTGGTATAAAACTA
GAGTTATAAATACTATAACCTGATCTCTCAATCTTAGATTTGGAGTGACA
ACCCTTTGATAACAGCTGGTACGGTTGCCCATGAGTTTGGACACAATGTT
GGATTATACCATTTTACATCAGAATGCATTTGTGATAACCCACCCTGTCT
CATGTCTTCATATGCAAAGTATGAACTACTCATTTTGACAAGAAAAGTTT
TGGGGATATAATGACCGTTCTATGGAAATGCAATGATAGTTCTTCGAAAA
GCTTCGTTTCTCTGATTTTGCGTTGAGTTTGACCAATGATAGAGTTTGGT
CAGGATAATTTTCGTTTTGAAGGCAATTATCAGAACGCAGAAATATTTAA
TGCTACTTGTAATTTCTAATCTATTTCTTTTGACTTTAGTTGGTCACCAG
TTCGAGGCTTGACAGATTGTACAAAGAAAGTGATCGAGGATAGATGTTCA
CTTGGAAAATGTTCCTGTTTGACTGACCAGCCTGCTGCGGTAAGAAGATT
GCAAAACCGAGGATAAATTGGTTTAATATTTTTCGCTGAAAACGGGGGAG
ATTGAAAACATAAAACCCAATCTTTTCCGGCAGGGTGCGGGCATTTCTAA
CCTGGCTGTGAAATCATGGTGAACTTTCGAAGGTCCATACTAGGACGAAC
CTTCAACATGGACCCTTCACTTggaattttcacaatttttcatcaatttc
aaaCGTATTATTTCTTCTATTTGACAGAGTTACATGGGAGCAACATGTGG
AAATGGGATCGTTGAGAAAGGTGAAGATTGTGATTGTGGACAACCCGAGG
TTCGTTTCTTGGAAGATTTGCTTGAATAAGATTTCTCAAGGAAGAAAAGA
AATAGCGTTTCCAAACTATTATAGAGACGCTAGATCTAATATTTTCGTAA
AGAGTTACAGATACAACTAGAGAAGAAATCAGCTCAACCTTAACGAATGA
AATCGAAGTTAGACCATAGGAGAGTGTGGTAACGCACGAGGcggaatctt
cgagttagaaaacttcgagttagcaattttcgagttagctaaattcaACA
TTCTGTAACTAAAATCTACACTATTAAATAAACTCTTCTTCTTCTCTACT
TAGTACTGCACAAATAAATGTTGTGATGCGTCCACGTGTAAATTTCAAAC
GCATGCACAATGCGCAGAAGGTGAATGCTGTACAGATGATTGTCAACTGA
AAGCAAAAGATGTGCTTTGTAGAGATGCACAGGGAGAATGTGATTTACCT
GAGACTTGTGATGGAAAGCAAGCAACGGTGAGTGTCCAAAGTCATCGTCT
CAGTGTATTTAGACCCTGTAGAAAAGAAAATGCATAATCAGCAAATTTGG
TTCAACCATTTCATTTACAGCTACTATAAATACAATTTTATCATTATGCA
AATCGACATAAATGCATGAAGCTACATAAATtgagattcttataaaaatg
agtTGACTTTTTCAGTGCCCTTTGGATGTTTACTTGCAAGATTACCAAGA
TTGTAACTCAAAAACAGTGAGTATTCTTTTTTTCTGTTACCAAAAAATGt
attaaatttaacaaaaatctttttccttgTATTNATTCTTTCTGTAACCA
AAAAATGtattaaatttaacaaaaatctttttccttgtatatctttattt
ttcaaaattttgaagtgttttttcaaaatccatcGTTGTCATGTCTTTTT
TCTCCTTATTTCCTTTTAAAAGTTCCCTTTTCCATGATTTCCAAGTTTTC
CCTAAAAAGCTTCTATCGCCAACAATTACCAGCCTTACCATTCTGACCGG
CCTGGCGATATTCTAGAAGTCAGATTTTCTAAACTTTAGAATGTAATTAA
AAATCTGTACCCAGTACCGTGGGATAACGATTaagaattttcatttcttt
cagaGCTATTGTTACAAAGGAAAATGTACAAAAACGTTGAATGAACAATG
TGAAACTCTTTGGGGTAACGGTAAGTCATATTTGTTGATTCTTTGACctg
gaatacacgttttttgtgAGAACATCTAAATTtgttgaagccttcggatg
ttctaaactttttgagttttaagcttaaaaattttcttattttcgccatt
ttgtaagtatttttgtaCGATTTCCTAAGGGATTTGGTCCATGAAGActt
ctaaaatgttcttaacttgttcttaatattttaaccatcgaagccttatg
ttcttatatagtttgttcctataaaaaacgtttagtgAACAAATGAAACC
AAAGTAGATCTATTAAGTGTCACCAAATCATTCAACTAATCATTTACTTA
TTGATTAAAAAGCGGCAAGCAAACAAAACAAAGGAAAGGTGTTTTAAACG
CTGAACATCGTTTGTTTTTGCAGAGGCGGATCACAGCAGAACATGCATCC
GAAATTACAAAGGAGACAAATTTGGTCATTGTGGAACAGACAAAAATGGA
AAGTTTATACCATGTGAAACTAAGTAAGAACTTCTGAACTTGTTTTTGAC
TCAGGTCCATAAGGGCCCATAAGTAGAAATAAAAGATTGGCGCAGTAGAA
TTAACACCTCTTAATCAAGTTAAGATTTAGGGTGGAATAGTTTACATTGT
GTAATTATGCAACGAAACTTCACAGATACCAATTACTCGTGGGAAGTTCA
TATATCAAACTGAATTTTCTTTCAGGAATGAATTTTGTGGAAAGGTTCAG
TGTCACGGAGATATCGCAagtcatttcattgtttttggaAGAAGTCGATC
AACTGCTGTCTATGGAAGTCAATGCAGGTAAAAAGAATTGTAGTCATTTA
TAGCCATTGGACATTACTTTGAATCAGAAATCAATATTGAGATTTTACAC
TAAAGCAATGCACCCTTTGACGCCCTGTTGGATGATTGTGATCGCGATAT
TATTGCCCCATAATCGTCTTCAAatttcttcagatttttttccttttgtc
ATTTCTAGATCGGGATTAACGTATGTTGGGGAGAATATAAATCCAACCAT
GGCATTTGATGGAACCAAATGTGATGCAGGAAAGGTAAGAGGATTTCAGT
TCTTTGTTAATTTATTAgttgatatttttctaaaatctagTTAATCATAT
TCACAAAaccccttcttcattttcgagaccaatttataatttttgtgatt
tttctttaCTGCACCTTGAAAAACTCTCAATCTTGTTCATTCATACAGGT
TTGTCAAAATCAGCAATGTATCGCAACTGATATCGCAAAATCAACTTCGA
AGTGTGACGATCGTTGTCATTTTGGGGTAAGTCTGCAATAGCTTACATCT
CTCGAGAGATACAACATATCAAATTTAAGATTTCTCTCTTGACGGACCAA
AGTCCACTAGAATATGCAAGAATAATAGCACTTGGTTTAGAATCTTAAAG
TGAAAACCCATCAATTAAAATAGTTCCAATGTTTCTATCCCATAGAGATG
TACAAACGTGGGAGCTTGTTATTGTCCACCGAAATTCAAATGTCCGGATT
GTTCTCGCATGGACCCAAACAATATTAACGGACAGGTGTGCAGTGAACAA
CCTTCTCAAACTCATGTAAGTTAAAACACTAAATTAAATTATTATAACAC
CTTCAATATCAGATTGAGAGCACTCCATCAATGTCATGATAGGTTTTGCG
ACTTTACTCCTCCGTGCTAAAATGTATTTAAATTACAAAGCCTCATTTGC
ATGCATCtattttatcttcattttctctCGTTTATTATAGAGACATCATG
ATGGAAAACTCAACTGGGAAggtaatttcatcaaaatattacTTACTTAT
TTACTTCCTTACTTTCTAGACATACTATACTTAACAAATAGTGAGCATCG
ATAGCCTTCAACAAGCTATTTCATAATCTTATCGATAATTCGTGGACCTG
CAGAGAATCATAACTCTAAAAAGATTCCTGAAAATTGACCTTCGACTGAC
ATATGATTTGTTATGTCCCTGAAATTGCCTCTACGACATTGACCATGACA
ATAAAACAGATAGAAGACAGACAGAAACGAAATGACAGCACACTCCATCA
CACTCTCACATATTTTACTTTAACCATTAACAGAATACTTGGACCTCTTA
ACAAGCAACTTGTTCTTGACTCGATGGAAAGCACGTGTTACATTCAAAAA
TCGTGTGTCGACAGGTGATACGCTCGATAAATACGTCCCAACAAAGAAAA
TCGACAGTGTAGACCATGCCATAGACAATTTGTTCAAAGATTTAAAAGAC
ATGAACTTAGCACCGACAACAACGACGACTACAACAACTACAACGACAAC
GACAACACCTACAACGACACCAACAACGACACCAACAACGACACCAACAA
CGACACCAACAACGACTACGACAGGTGTGTGAAGACTATATTATATTAAT
ACCAGCcttaactgttcttatttttccgtGATATTCAGGCTTTAAATGTT
CTCAAAATGGTCTTTATAAAGAGTTTAAAAGGTAGCATTTTGGCACCTTT
TCTTCTCCTCCCACTTAACGAACGGAACGAAGGAAATACAATGTCTGTCA
GGGTATCAAAAAGATCCATAAAATAATTTGGTATTTTTCTCACTATTTTC
TTTTCTAGTTGCACCACTTTGCTTGGATGCGGTCGGGATGATCAATATCG
GATGTCGTTCGAAAAGTGGTGGCACAATGATCGCTAACTATCGTAATGCT
ATGGATTGGAATAATCCATCTGACTCAATAGAAAAgtaagttttactttt
ttatcaacCCTTGATATCAGAACTTTAAAGTTATTTGTGGCAACGGCATT
AAATTGAGCAAAAAATAGGCCAGCCCTTTGCATATTTCTTCAAATACCTT
ATTATAATCTGCCACTTTACCAAGTAGACAATTTCTTTTGTCTAACTTTT
TGATTGGTATGCTAAAGTAATTAAATTaaactaaaactaaaacttaaact
aaaatttaaaatctccATTTCCAGAATGATTTGTGATTGTGCAAAGACTG
CAAAAGACGATGGTTATGTTGGCTTTGGTTTGGTTTACTGGGGAGAATGT
TGGGGCTATTCAACCAAAGATGAAGCTGTTAACCAATCAGGATCGACCAA
TTGTTCGAATGATCAATATAACTCTTGTGCAGAAGAAGATCGCATTTGTA
TAGGCAAAGCTGATGCCTCGTACGCTTTTTTACTCTGAAGTGATTATTAT
GATTATATGATTTAGCGGAAGACTGCGAGGGAGTTGGTTGCTAAGTTTTG
CGGACCGACAAGTCTACCAACAGAATAGGATCTAACTAACTCGCAAGTTA
TCTGTCTCTATAACTCGACGAACAAATCTGCATTCACAATGCATGATCGA
GTTATAGGGGGTTAACATAGAGACCCCAATGTAATTAACAATACTTTATT
GTTATTACTGGATCTCAGAAAAGAGCTTATTTGTGGTAGATTTTTAACCC
TTAAACTTTATAATAAATTGTAAATATATTATTTAGAATCTGAGAATTAT
AATATGAAAGGAATAAgtttatatattataatatatttttgtgAGACAAA
TTTACATGAGCAGGGCCCTTATAATGAACTGGGATGTGGAGGTGCCTAAA
ATATAGTGAATAAGGTGTCAACTTCGATTTCGACCCCCTAGTATGCCTGA
AAATGGCcctatttcaaattttggaatgAAATTAAGTTTTGTAAATTATT
AATCGTTAtcttaaaaacaactttttatttgagaaaaatgaggAGGCTAT
AAACCTATAACCCCGATGGCATGGGCCCTGATGGGTATACTTCAATTAAA
Gaagttttatttctaaaaatgaaaaatatatatgaaaaataaatgaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032802XLOC_032802Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051810-exon-scaffold_205-1491911889:208119..208119TCONS_00051810-exon-scaffold_205-1491911889:208119..208119Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:208119..208119TCONS_00051810-exon-scaffold_205-1510915933:208119..208119Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:208119..208119TCONS_00051810-exon-scaffold_205-1575043694:208119..208119Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:208923..208985TCONS_00051810-exon-scaffold_205-1491911889:208923..208985Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:208923..208985TCONS_00051810-exon-scaffold_205-1510915933:208923..208985Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:208923..208985TCONS_00051810-exon-scaffold_205-1575043694:208923..208985Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:210094..210219TCONS_00051810-exon-scaffold_205-1491911889:210094..210219Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:210094..210219TCONS_00051810-exon-scaffold_205-1510915933:210094..210219Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:210094..210219TCONS_00051810-exon-scaffold_205-1575043694:210094..210219Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:210480..210531TCONS_00051810-exon-scaffold_205-1491911889:210480..210531Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:210480..210531TCONS_00051810-exon-scaffold_205-1510915933:210480..210531Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:210480..210531TCONS_00051810-exon-scaffold_205-1575043694:210480..210531Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:210785..210916TCONS_00051810-exon-scaffold_205-1491911889:210785..210916Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:210785..210916TCONS_00051810-exon-scaffold_205-1510915933:210785..210916Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:210785..210916TCONS_00051810-exon-scaffold_205-1575043694:210785..210916Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:211400..211498TCONS_00051810-exon-scaffold_205-1491911889:211400..211498Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:211400..211498TCONS_00051810-exon-scaffold_205-1510915933:211400..211498Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:211400..211498TCONS_00051810-exon-scaffold_205-1575043694:211400..211498Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:211797..211868TCONS_00051810-exon-scaffold_205-1491911889:211797..211868Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:211797..211868TCONS_00051810-exon-scaffold_205-1510915933:211797..211868Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:211797..211868TCONS_00051810-exon-scaffold_205-1575043694:211797..211868Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:212417..212592TCONS_00051810-exon-scaffold_205-1491911889:212417..212592Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:212417..212592TCONS_00051810-exon-scaffold_205-1510915933:212417..212592Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:212417..212592TCONS_00051810-exon-scaffold_205-1575043694:212417..212592Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:213059..213146TCONS_00051810-exon-scaffold_205-1491911889:213059..213146Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:213059..213146TCONS_00051810-exon-scaffold_205-1510915933:213059..213146Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:213059..213146TCONS_00051810-exon-scaffold_205-1575043694:213059..213146Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:213856..213986TCONS_00051810-exon-scaffold_205-1491911889:213856..213986Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:213856..213986TCONS_00051810-exon-scaffold_205-1510915933:213856..213986Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:213856..213986TCONS_00051810-exon-scaffold_205-1575043694:213856..213986Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:214208..214307TCONS_00051810-exon-scaffold_205-1491911889:214208..214307Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:214208..214307TCONS_00051810-exon-scaffold_205-1510915933:214208..214307Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:214208..214307TCONS_00051810-exon-scaffold_205-1575043694:214208..214307Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:214546..214617TCONS_00051810-exon-scaffold_205-1491911889:214546..214617Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:214546..214617TCONS_00051810-exon-scaffold_205-1510915933:214546..214617Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:214546..214617TCONS_00051810-exon-scaffold_205-1575043694:214546..214617Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:214922..215095TCONS_00051810-exon-scaffold_205-1491911889:214922..215095Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:214922..215095TCONS_00051810-exon-scaffold_205-1510915933:214922..215095Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:214922..215095TCONS_00051810-exon-scaffold_205-1575043694:214922..215095Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:215284..215334TCONS_00051810-exon-scaffold_205-1491911889:215284..215334Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:215284..215334TCONS_00051810-exon-scaffold_205-1510915933:215284..215334Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:215284..215334TCONS_00051810-exon-scaffold_205-1575043694:215284..215334Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:215722..215788TCONS_00051810-exon-scaffold_205-1491911889:215722..215788Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:215722..215788TCONS_00051810-exon-scaffold_205-1510915933:215722..215788Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:215722..215788TCONS_00051810-exon-scaffold_205-1575043694:215722..215788Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:216192..216291TCONS_00051810-exon-scaffold_205-1491911889:216192..216291Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:216192..216291TCONS_00051810-exon-scaffold_205-1510915933:216192..216291Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:216192..216291TCONS_00051810-exon-scaffold_205-1575043694:216192..216291Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:216494..216595TCONS_00051810-exon-scaffold_205-1491911889:216494..216595Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:216494..216595TCONS_00051810-exon-scaffold_205-1510915933:216494..216595Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:216494..216595TCONS_00051810-exon-scaffold_205-1575043694:216494..216595Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:216777..216852TCONS_00051810-exon-scaffold_205-1491911889:216777..216852Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:216777..216852TCONS_00051810-exon-scaffold_205-1510915933:216777..216852Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:216777..216852TCONS_00051810-exon-scaffold_205-1575043694:216777..216852Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:217017..217094TCONS_00051810-exon-scaffold_205-1491911889:217017..217094Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:217017..217094TCONS_00051810-exon-scaffold_205-1510915933:217017..217094Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:217017..217094TCONS_00051810-exon-scaffold_205-1575043694:217017..217094Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:217264..217383TCONS_00051810-exon-scaffold_205-1491911889:217264..217383Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:217264..217383TCONS_00051810-exon-scaffold_205-1510915933:217264..217383Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:217264..217383TCONS_00051810-exon-scaffold_205-1575043694:217264..217383Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:217559..217589TCONS_00051810-exon-scaffold_205-1491911889:217559..217589Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:217559..217589TCONS_00051810-exon-scaffold_205-1510915933:217559..217589Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:217559..217589TCONS_00051810-exon-scaffold_205-1575043694:217559..217589Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:217902..218192TCONS_00051810-exon-scaffold_205-1491911889:217902..218192Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:217902..218192TCONS_00051810-exon-scaffold_205-1510915933:217902..218192Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:217902..218192TCONS_00051810-exon-scaffold_205-1575043694:217902..218192Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:218427..218553TCONS_00051810-exon-scaffold_205-1491911889:218427..218553Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:218427..218553TCONS_00051810-exon-scaffold_205-1510915933:218427..218553Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:218427..218553TCONS_00051810-exon-scaffold_205-1575043694:218427..218553Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1491911889:218793..219667TCONS_00051810-exon-scaffold_205-1491911889:218793..219667Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1510915933:218793..219667TCONS_00051810-exon-scaffold_205-1510915933:218793..219667Clytia hemisphaericaexon
TCONS_00051810-exon-scaffold_205-1575043694:218793..219667TCONS_00051810-exon-scaffold_205-1575043694:218793..219667Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:208119..219667 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0262436	2.77422e-07	1.02933e-05	0	2.058	5.19097	1.55471	0.837224	1.19564	0.44918	2.1213e-10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00051810 vs. Swiss-Prot (Human)
Match: ADA12 (Disintegrin and metalloproteinase domain-containing protein 12 OS=Homo sapiens GN=ADAM12 PE=1 SV=3)

HSP 1 Score: 260.381 bits (664), Expect = 1.568e-72
Identity = 198/590 (33.56%), Postives = 290/590 (49.15%), Query Frame = 3 
Query:  117 NCHYQGLEKNFG-GQVLLSTCGGTLNGLLVDGKQNKTYMVEYEESLANHIVYEVDKLPQNKRITMATDIQRNEITKVEGVNIKANHXXXXXXXXXXXXXXXXXXXXEKYASLVMVVDNSAFVHLGSDKTKVIHFVLAIVNHMDFLFRQANIHVILTHLEIWDVSDKFTVTATTSDNLNHFTQYNKDIMINQNGWRHDNAHFLTHVDXXXXXXXXXXXXSICGQGGLSQAMSQIWSDNPLITAGTVAHEFGHNVGLYHFTSE--CIC----DNPPCLMSSYANWSPVRGLTDCTKKVIEDRCSLGKCSCLTDQPAA--SYMGATCGNGIVEKGEDCDCGQPEYCTNKCCDASTCKFQTHAQCAEGECCTDDCQLKAKDVLCRDAQGECDLPETCDGKQATCPLDVYLQDYQDCNSKTSYCYKGKCTKTLNEQCETLWGNEADHSR-TCIR--NYKGDKFGHCGTDKNGKFIPCETKNEFCGKVQCHGDIASHFI-VFGRSRSTAVYGSQ-----CRSGLTYVGENI-NPTMAFDGTKCDAGKVCQNQQCIATDIAKSTSKCDDRCH-FGRCTNVGACYCPPKFKCPDCSRM 1826
            +C+Y G  + +    V LSTC G L GL+V   +N++Y++E  +S  N   Y++    + K +  +     N        N+ A +         A     +     KY  LV+V DN  F   G D  KV   ++ I NH+D  +R  NI ++L  +E+W+  DK +V+     +L+ F  + K  ++ +    HDNA  ++ V  QG  +G+  + S+C     S  +    SDNPL  A T+AHE GHN G+ H T +  C C    +   C+M++   +      + C++K +E     G   CL + P    S+ G  CGN  VE+GE+CDCG+PE C N+CC+A+TC  +  A CA G CC +DCQLK     CRD+   CDLPE C G    CP +VYL D   C     YCY G C +T  +QC TLWG  A  +   C    N  GD +G+CG      F  CE ++  CGK+QC G  +   I     S  T +   Q     CR    Y+G+++ +P +   GTKC  GK+C N+QC    +     +C  +CH  G C N   C+C   +  P C + 
Sbjct:  118 HCYYHGHVRGYSDSAVSLSTCSG-LRGLIVF--ENESYVLEPMKSATNR--YKLFPAKKLKSVRGSCGSHHNT------PNLAAKNVFPPPSQTWARRHKRETLKATKYVELVIVADNREFQRQGKDLEKVKQRLIEIANHVDKFYRPLNIRIVLVGVEVWNDMDKCSVSQDPFTSLHEFLDWRKMKLLPRKS--HDNAQLVSGVYFQGTTIGMAPIMSMC-TADQSGGIVMDHSDNPLGAAVTLAHELGHNFGMNHDTLDRGCSCQMAVEKGGCIMNASTGYPFPMVFSSCSRKDLETSLEKGMGVCLFNLPEVRESFGGQKCGNRFVEEGEECDCGEPEECMNRCCNATTCTLKPDAVCAHGLCC-EDCQLKPAGTACRDSSNSCDLPEFCTGASPHCPANVYLHDGHSCQDVDGYCYNGIC-QTHEQQCVTLWGPGAKPAPGICFERVNSAGDPYGNCGKVSKSSFAKCEMRDAKCGKIQCQGGASRPVIGTNAVSIETNIPLQQGGRILCRGTHVYLGDDMPDPGLVLAGTKCADGKICLNRQCQNISVF-GVHECAMQCHGRGVCNNRKNCHCEAHWAPPFCDKF 690
The following BLAST results are available for this feature:
BLAST of TCONS_00051810 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADA121.568e-7233.56Disintegrin and metalloproteinase domain-containin... [more]
back to top