TCONS_00051828 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051828
Unique NameTCONS_00051828
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1726

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051828 ID=TCONS_00051828|Name=TCONS_00051828|organism=Clytia hemisphaerica|type=transcript|length=1726bp
CACCACCACCTCCTCCACCTCCACCAGGTTTTGGCCCACCTCCACCGCCC
CCACCTCCAGGACCACCAGGTATGGGAGGACCTCCCCCACCACCTCCTCC
TCCTGGAGGTGGTCCACCAGGACCGCCACCCCCACCAGGGGCTCCCCCAC
CACCAGGAGGATTTAGAGCTGGTCCTCAACTTCCTGCTGGATTAacacaa
aagaagaaattcaacCCTAAGAAACAACCGAAAAGAATTAATTGGGATCC
CATTCACGTCACCAAAATCAAAGGCGGATCATTCTGGACCAAAGTCAAAG
AAGAAAAACTGGAGAAGGAGGATTTCTTAGATCTCTTGTCTGAAACTTTC
GCATCCAAACCTGGGAAAAGAATTGGTGACCCCGGACCAGGAGGGGGTGG
CGCCGCAAccgaagaaaaacaaaagaagggACACGAGCTTAAAGTTTTGG
ATGGAAAAACTGCTCAAAATCTTTccattttcgtTGGATCATTTGGTTCC
AAAATGTCGTATGAGGATATCAAGAAGAGAATTCTGGAGTTTGATGAAGA
AATTATCGACAGCAGCGCTCTTGAGAACATGCAAAAATTACTACCAACTA
AAGAACAGATGGACCAACTGAAAGCATTCCAAAGTGAATATGACCATCTC
AATAAATCAGAACAGTTTGCCTTGGTTATCTCATCGATTCCTCGGTTAGA
ACAACGTATCAATTGCATGAAAGCCAAACTTGACTTCCTCGAACAAATGG
TTGACGTTAAACCGGATCTTGCGAATGCCATTGAATCATGCAAAGAAGTT
AAAAACAGCCCAAGGTGGTCCAGATTCTTAGAGctctTGTTACTGGTGGG
AAACTACATGAACTCTGGCACCAAGAAATCACAAGCTTTTGGTTTTGATT
TGAACGTGTTGACCAAGATTGGCAACACAAAATCAGCAGACGGTAAATTG
ACGTTAACACATTTCTTAGCTGAGATGATCCAAGAAAAATATCCTGAAGT
CGATGGATGGGAAAACGATCTGTCTCATCTTAAAGAAGGCCATCGAGTAT
CAGACGAGCAAACGACGAAAACAGTGAACGGTTTGAATGCCATGTTGACG
AGGATTCGAAACGAATTGAAACATCATGATACGCCTTTCTCTGCTGATGA
TAAATTTGGAAACAAAATGACCGTATCTTTTCACGCCTGAAATCGTTTTA
CTGCTTTCcaaattttacttttatatcatttttagcGGTGTCCACCACTA
AAGTTTCTTTGTTTCGGATTTCAATTTTGCGATATCAGGAGTGGCACAGG
TAACGTTAGTCAGCTCGAAACCATCGCGCGGTGTTTTCATTGCCACTCTA
GGGTATCATAAAAAACCTAGAAGACTCAAGAATTAGCTTTAAAATGAAGG
AAtataataaatcaataaattaaTTCATAATGAATAAGGCATGTTTCTAG
TTCACTTTGGGAGAAAGAGAATTTTCTTTTAGTTCGAGACCTGTCGGTCT
TTTTATTAGGTCATAAGCCTCAGAATTTTAACCATCCTCAACGTGTTCGC
CGTatcgaaaactgtcaaaaaagttttgtcagaTCGAACACTAGCGGTCT
CTTTGAtctccacgagcccaaaaaagaggtcaaaaaaggGCTTAAATTTA
GGTAATGAGCCTCATGGCTGAAATTTTACAGGTGATTAGTACAACCCTTC
Aggacaatgaaaatcgaaaatctaac
Run BLAST on NCBI

protein sequence of TCONS_00051828-protein

>TCONS_00051828-protein ID=TCONS_00051828-protein|Name=TCONS_00051828-protein|organism=Clytia hemisphaerica|type=polypeptide|length=395bp
PPPPPPPPGFGPPPPPPPPGPPGMGGPPPPPPPPGGGPPGPPPPPGAPPP
PGGFRAGPQLPAGLTQKKKFNPKKQPKRINWDPIHVTKIKGGSFWTKVKE
EKLEKEDFLDLLSETFASKPGKRIGDPGPGGGGAATEEKQKKGHELKVLD
GKTAQNLSIFVGSFGSKMSYEDIKKRILEFDEEIIDSSALENMQKLLPTK
EQMDQLKAFQSEYDHLNKSEQFALVISSIPRLEQRINCMKAKLDFLEQMV
DVKPDLANAIESCKEVKNSPRWSRFLELLLLVGNYMNSGTKKSQAFGFDL
NVLTKIGNTKSADGKLTLTHFLAEMIQEKYPEVDGWENDLSHLKEGHRVS
DEQTTKTVNGLNAMLTRIRNELKHHDTPFSADDKFGNKMTVSFHA
Run BLAST on NCBI

transcript from alignment at scaffold_205:319677..322951+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051828 ID=TCONS_00051828|Name=TCONS_00051828|organism=Clytia hemisphaerica|type=transcript|length=3275bp|location=Sequence derived from alignment at scaffold_205:319677..322951+ (Clytia hemisphaerica)
CACCACCACCTCCTCCACCTCCACCAGGTTTTGGCCCACCTCCACCGCCC
CCACCTCCAGGACCACCAGGTATGGGAGGACCTCCCCCACCACCTCCTCC
TCCTGGAGGTGGTCCACCAGGACCGCCACCCCCACCAGGGGCTCCCCCAC
CACCAGGAGGATTTAGAGCTGGTCCTCAACTTCCTGCTGGATTAacacaa
aagaagaaattcaacCCTAAGAAACAACCGAAAAGAATTAATTGGGATCC
CATTCACGTCACCAAAATCAAAGGCGGATCATTCTGGACCAAAGTCAAAG
AAGAAAAACTGGAGAAGGAGGATTTCTTAGATCTCTTGTCTGAAACTTTC
GCATCCAAACCTGGGAAAAGAATTGGTGACCCCGGACCAGGAGGGGGTGG
CGCCGCAAccgaagaaaaacaaaagaagggACACGAGCTTAAAGTTTTGG
ATGGAAAAACTGCTCAAAATCTTTGTAAGTGATAACTTAACTGAATCAAT
CAACATCCttgaattattttaaagaatgtCGACAAAATGCTTACGATTTT
CCACTACTTCATTTTTCACTCAAGTTTGGCTCAAATCAGTCACGTTTTGA
CAAGTTTATCATTTacaatttttagccattttcgtTGGATCATTTGGTTC
CAAAATGTCGTATGAGGATATCAAGAAGAGAATTCTGGAGTTTGATGAAG
AAATTATCGACAGCAGCGCTCTTGAGAACATGCAAAAATTACTGCCAACT
AAAGAACAGGTANAAATTATCGACAGCAGCGCTCTTGAGAACATGCAAAA
ATTACTACCAACTAAAGAACAGGTGACTCTATCAAATATGAACAAATGAA
TTTTTTCATGCAGAAACTAGTAGaaagtcatcattttcaaaatgtttaat
tttcatgaaataaaatcTTGAGGCTAATTCTCTTCAAATTCATCGTCACA
ACAATGAACTTTTTTTCTCTAGATGGACCAACTGAAAGCATTCCAAAGTG
AATATGACCATCTCAATAAATCAGAACAGTTTGCCTTGGTTGTAAGTCTA
ATCTTTGTTTGTTCATCTACAGTATCGTAATTGTaatattgttttcgaaa
atccgcaaagcttttgattggtcaagcgctgaaattctgttgtaatgtca
cgtgacctcgTTAGGATTTCCTACCGAAATAcggcacgacatctagccct
tacggctttataaatctgttcATACAGTGCTGATGAGTCCCAATAAGGAc
aaaatgcatatgctgctctgctaCTCAATCTCCtaaaagaagatagttgg
acagaaagtCTTTGAATTTCTCTAAATATGCATTTTGGTGGTTATCGTAT
TTTCTAGATCTCATCGATTCCTCGGTTAGAACAACGTATCAATTGCATGA
AAGCCAAACTTGACTTCCTCGAACAAATGGTTGACGTTAAACCGGTGAGT
CTGACGCatttaataaaaacaatttgtaaatttttgacaTTGTTTCGTAA
ATACGAAAGCAAATTTCTTCAAGGTATCTTGACTTTTATTGCATTTGATC
TTTTTTTAGGATCTTGCGAATGCCATTGAATCATGCAAAGAAGTTAAAAA
CAGCCCAAGGTGGTCCAGATTCTTAGAGGTGGGTGTTATCTGTTCCCTGA
CGAcaatgtcaaaataaaattctatGTAATTCAGGCAGTATATTCCCACT
TAATCAACAAGTTAAGCCCAGTGCAAGCCTGAATAACTGAAATTGAGTTT
CTAATATTTACTCTTGTTTCGAAAACTCTTAATGTTATTCTgtgcttttt
ttttctttttagctctTGTTACTGGTGGGAAACTACATGAACTCTGGCAC
CAAGAAATCACAAGCTTTTGGTTTTGATTTGAACGTGTTGACCAAGGTTT
GATTTCAGTATCATATACCGTCATTTATCTAATCAAAAAGTCTACGATTG
AGGTGCTAAAACCTTTTCTTGTGACTTTAAactcaaaatgtttttatacT
ATTTTCAACAGATTGGCAACACAAAATCAGCAGACGGTAAATTGACGTTA
ACACATTTCTTAGCTGAGATGATCCAAGAAAAATATCCTGAAGTCGATGG
ATGGGAAAACGATCTGTCTCATCTTAAAGAAGGCCATCGAGGTAATATCT
CACTTTCAAATCCCATGACAACTGCAACTTTCTGATCGTGAAATTTTGGG
ATTCGCTCTTTGTTTTGAGCTTTTCGACTTTCAGCTATTAAGTGTCCACA
TTNGTTTGGGATTCGCTCTTTGTAAGAGCTTTTCGACTTTCAGCTATTAA
AAGTGTCcacatttcaaaatgtttaagtGACTTTAGGACCAACAATCCTG
CTTTTGCATAAGTTCAAATATTGGGCTTTGCGAATTGAAAGGTTTGCTTA
AACTGGTTGCCTAGGGTTTCTAGTTTTACCAGAGGTGACGGATATGTAGC
GGAATTTCAAATATCAACCCTTGGAAAAGAAAGAACTGCCATTTTTTTAA
TCCATTTATAATGTTCGATATTTTCCGTACTCTTGACCTTTGGGAAGTAA
AATTTCCCCTTCAGAACTGATGCCACTCTTCTTTCTTGCATTACAGTATC
AGACGAGCAAACGACGAAAACAGTGAACGGTTTGAATGCCATGTTGACGA
GGATTCGAAACGAATTGAAACATCATGATACGCCTTTCTCTGCTGATGAT
AAATTTGGAAACAAAATGACCGTATCTTTTCACGCCTGAAATCGTTTTAC
TGCTTTCcaaattttacttttatatcatttttagcGGTGTCCACCACTAA
AGTTTCTTTGTTTCGGATTTCAATTTTGCGATATCAGGAGTGGCACAGGT
AACGTTAGTCAGCTCGAAACCATCGCGCGGTGTTTTCATTGCCACTCTAG
GGTATCATAAAAAACCTAGAAGACTCAAGAATTAGCTTTAAAATGAAGGA
AtataataaatcaataaattaaTTCATAATGAATAAGGCATGTTTCTAGT
TCACTTTGGGAGAAAGAGAATTTTCTTTTAGTTCGAGACCTGTCGGTCTT
TTTATTAGGTCATAAGCCTCAGAATTTTAACCATCCTCAACGTGTTCGCC
GTatcgaaaactgtcaaaaaagttttgtcagaTCGAACACTAGCGGTCTC
TTTGAtctccacgagcccaaaaaagaggtcaaaaaaggGCTTAAATTTAG
GTAATGAGCCTCATGGCTGAAATTTTACAGGTGATTAGTACAACCCTTCA
ggacaatgaaaatcgaaaatctaac

Coding sequence (CDS) from alignment at scaffold_205:319677..322951+

>TCONS_00051828 ID=TCONS_00051828|Name=TCONS_00051828|organism=Clytia hemisphaerica|type=CDS|length=10692bp|location=Sequence derived from alignment at scaffold_205:319677..322951+ (Clytia hemisphaerica)
CCACCACCTCCTCCACCTCCACCAGGTTTTGGCCCACCTCCACCGCCCCC
ACCTCCAGGACCACCAGGTATGGGAGGACCTCCCCCACCACCTCCTCCTC
CTGGAGGTGGTCCACCAGGACCGCCACCCCCACCAGGGGCTCCCCCACCA
CCAGGAGGATTTAGAGCTGGTCCTCAACTTCCTGCTGGATTAacacaaaa
gaagaaattcaacCCTAAGAAACAACCGAAAAGAATTAATTGGGATCCCA
TTCACGTCACCAAAATCAAAGGCGGATCATTCTGGACCAAAGTCAAAGAA
GAAAAACTGGAGAAGGAGGATTTCTTAGATCTCTTGTCTGAAACTTTCGC
ATCCAAACCTGGGAAAAGAATTGGTGACCCCGGACCAGGAGGGGGTGGCG
CCGCAAccgaagaaaaacaaaagaagggACACGAGCTTAAAGTTTTGGAT
GGAAAAACTGCTCAAAATCTTTccattttcgtTGGATCATTTGGTTCCAA
AATGTCGTATGAGGATATCAAGAAGAGAATTCTGGAGTTTGATGAAGAAA
TTATCGACAGCAGCGCTCTTGAGAACATGCAAAAATTACTACCAACTAAA
GAACAGATGGACCAACTGAAAGCATTCCAAAGTGAATATGACCATCTCAA
TAAATCAGAACAGTTTGCCTTGGTTATCTCATCGATTCCTCGGTTAGAAC
AACGTATCAATTGCATGAAAGCCAAACTTGACTTCCTCGAACAAATGGTT
GACGTTAAACCGGATCTTGCGAATGCCATTGAATCATGCAAAGAAGTTAA
AAACAGCCCAAGGTGGTCCAGATTCTTAGAGctctTGTTACTGGTGGGAA
ACTACATGAACTCTGGCACCAAGAAATCACAAGCTTTTGGTTTTGATTTG
AACGTGTTGACCAAGATTGGCAACACAAAATCAGCAGACGGTAAATTGAC
GTTAACACATTTCTTAGCTGAGATGATCCAAGAAAAATATCCTGAAGTCG
ATGGATGGGAAAACGATCTGTCTCATCTTAAAGAAGGCCATCGAGTATCA
GACGAGCAAACGACGAAAACAGTGAACGGTTTGAATGCCATGTTGACGAG
GATTCGAAACGAATTGAAACATCATGATACGCCTTTCTCTGCTGATGATA
AATTTGGAAACAAAATGACCGTATCTTTTCACGCCTGACCACCACCTCCT
CCACCTCCACCAGGTTTTGGCCCACCTCCACCGCCCCCACCTCCAGGACC
ACCAGGTATGGGAGGACCTCCCCCACCACCTCCTCCTCCTGGAGGTGGTC
CACCAGGACCGCCACCCCCACCAGGGGCTCCCCCACCACCAGGAGGATTT
AGAGCTGGTCCTCAACTTCCTGCTGGATTAacacaaaagaagaaattcaa
cCCTAAGAAACAACCGAAAAGAATTAATTGGGATCCCATTCACGTCACCA
AAATCAAAGGCGGATCATTCTGGACCAAAGTCAAAGAAGAAAAACTGGAG
AAGGAGGATTTCTTAGATCTCTTGTCTGAAACTTTCGCATCCAAACCTGG
GAAAAGAATTGGTGACCCCGGACCAGGAGGGGGTGGCGCCGCAAccgaag
aaaaacaaaagaagggACACGAGCTTAAAGTTTTGGATGGAAAAACTGCT
CAAAATCTTTccattttcgtTGGATCATTTGGTTCCAAAATGTCGTATGA
GGATATCAAGAAGAGAATTCTGGAGTTTGATGAAGAAATTATCGACAGCA
GCGCTCTTGAGAACATGCAAAAATTACTACCAACTAAAGAACAGATGGAC
CAACTGAAAGCATTCCAAAGTGAATATGACCATCTCAATAAATCAGAACA
GTTTGCCTTGGTTATCTCATCGATTCCTCGGTTAGAACAACGTATCAATT
GCATGAAAGCCAAACTTGACTTCCTCGAACAAATGGTTGACGTTAAACCG
GATCTTGCGAATGCCATTGAATCATGCAAAGAAGTTAAAAACAGCCCAAG
GTGGTCCAGATTCTTAGAGctctTGTTACTGGTGGGAAACTACATGAACT
CTGGCACCAAGAAATCACAAGCTTTTGGTTTTGATTTGAACGTGTTGACC
AAGATTGGCAACACAAAATCAGCAGACGGTAAATTGACGTTAACACATTT
CTTAGCTGAGATGATCCAAGAAAAATATCCTGAAGTCGATGGATGGGAAA
ACGATCTGTCTCATCTTAAAGAAGGCCATCGAGTATCAGACGAGCAAACG
ACGAAAACAGTGAACGGTTTGAATGCCATGTTGACGAGGATTCGAAACGA
ATTGAAACATCATGATACGCCTTTCTCTGCTGATGATAAATTTGGAAACA
AAATGACCGTATCTTTTCACGCCTGACCACCACCTCCTCCACCTCCACCA
GGTTTTGGCCCACCTCCACCGCCCCCACCTCCAGGACCACCAGGTATGGG
AGGACCTCCCCCACCACCTCCTCCTCCTGGAGGTGGTCCACCAGGACCGC
CACCCCCACCAGGGGCTCCCCCACCACCAGGAGGATTTAGAGCTGGTCCT
CAACTTCCTGCTGGATTAacacaaaagaagaaattcaacCCTAAGAAACA
ACCGAAAAGAATTAATTGGGATCCCATTCACGTCACCAAAATCAAAGGCG
GATCATTCTGGACCAAAGTCAAAGAAGAAAAACTGGAGAAGGAGGATTTC
TTAGATCTCTTGTCTGAAACTTTCGCATCCAAACCTGGGAAAAGAATTGG
TGACCCCGGACCAGGAGGGGGTGGCGCCGCAAccgaagaaaaacaaaaga
agggACACGAGCTTAAAGTTTTGGATGGAAAAACTGCTCAAAATCTTTcc
attttcgtTGGATCATTTGGTTCCAAAATGTCGTATGAGGATATCAAGAA
GAGAATTCTGGAGTTTGATGAAGAAATTATCGACAGCAGCGCTCTTGAGA
ACATGCAAAAATTACTACCAACTAAAGAACAGATGGACCAACTGAAAGCA
TTCCAAAGTGAATATGACCATCTCAATAAATCAGAACAGTTTGCCTTGGT
TATCTCATCGATTCCTCGGTTAGAACAACGTATCAATTGCATGAAAGCCA
AACTTGACTTCCTCGAACAAATGGTTGACGTTAAACCGGATCTTGCGAAT
GCCATTGAATCATGCAAAGAAGTTAAAAACAGCCCAAGGTGGTCCAGATT
CTTAGAGctctTGTTACTGGTGGGAAACTACATGAACTCTGGCACCAAGA
AATCACAAGCTTTTGGTTTTGATTTGAACGTGTTGACCAAGATTGGCAAC
ACAAAATCAGCAGACGGTAAATTGACGTTAACACATTTCTTAGCTGAGAT
GATCCAAGAAAAATATCCTGAAGTCGATGGATGGGAAAACGATCTGTCTC
ATCTTAAAGAAGGCCATCGAGTATCAGACGAGCAAACGACGAAAACAGTG
AACGGTTTGAATGCCATGTTGACGAGGATTCGAAACGAATTGAAACATCA
TGATACGCCTTTCTCTGCTGATGATAAATTTGGAAACAAAATGACCGTAT
CTTTTCACGCCTGACCACCACCTCCTCCACCTCCACCAGGTTTTGGCCCA
CCTCCACCGCCCCCACCTCCAGGACCACCAGGTATGGGAGGACCTCCCCC
ACCACCTCCTCCTCCTGGAGGTGGTCCACCAGGACCGCCACCCCCACCAG
GGGCTCCCCCACCACCAGGAGGATTTAGAGCTGGTCCTCAACTTCCTGCT
GGATTAacacaaaagaagaaattcaacCCTAAGAAACAACCGAAAAGAAT
TAATTGGGATCCCATTCACGTCACCAAAATCAAAGGCGGATCATTCTGGA
CCAAAGTCAAAGAAGAAAAACTGGAGAAGGAGGATTTCTTAGATCTCTTG
TCTGAAACTTTCGCATCCAAACCTGGGAAAAGAATTGGTGACCCCGGACC
AGGAGGGGGTGGCGCCGCAAccgaagaaaaacaaaagaagggACACGAGC
TTAAAGTTTTGGATGGAAAAACTGCTCAAAATCTTTccattttcgtTGGA
TCATTTGGTTCCAAAATGTCGTATGAGGATATCAAGAAGAGAATTCTGGA
GTTTGATGAAGAAATTATCGACAGCAGCGCTCTTGAGAACATGCAAAAAT
TACTACCAACTAAAGAACAGATGGACCAACTGAAAGCATTCCAAAGTGAA
TATGACCATCTCAATAAATCAGAACAGTTTGCCTTGGTTATCTCATCGAT
TCCTCGGTTAGAACAACGTATCAATTGCATGAAAGCCAAACTTGACTTCC
TCGAACAAATGGTTGACGTTAAACCGGATCTTGCGAATGCCATTGAATCA
TGCAAAGAAGTTAAAAACAGCCCAAGGTGGTCCAGATTCTTAGAGctctT
GTTACTGGTGGGAAACTACATGAACTCTGGCACCAAGAAATCACAAGCTT
TTGGTTTTGATTTGAACGTGTTGACCAAGATTGGCAACACAAAATCAGCA
GACGGTAAATTGACGTTAACACATTTCTTAGCTGAGATGATCCAAGAAAA
ATATCCTGAAGTCGATGGATGGGAAAACGATCTGTCTCATCTTAAAGAAG
GCCATCGAGTATCAGACGAGCAAACGACGAAAACAGTGAACGGTTTGAAT
GCCATGTTGACGAGGATTCGAAACGAATTGAAACATCATGATACGCCTTT
CTCTGCTGATGATAAATTTGGAAACAAAATGACCGTATCTTTTCACGCCT
GACCACCACCTCCTCCACCTCCACCAGGTTTTGGCCCACCTCCACCGCCC
CCACCTCCAGGACCACCAGGTATGGGAGGACCTCCCCCACCACCTCCTCC
TCCTGGAGGTGGTCCACCAGGACCGCCACCCCCACCAGGGGCTCCCCCAC
CACCAGGAGGATTTAGAGCTGGTCCTCAACTTCCTGCTGGATTAacacaa
aagaagaaattcaacCCTAAGAAACAACCGAAAAGAATTAATTGGGATCC
CATTCACGTCACCAAAATCAAAGGCGGATCATTCTGGACCAAAGTCAAAG
AAGAAAAACTGGAGAAGGAGGATTTCTTAGATCTCTTGTCTGAAACTTTC
GCATCCAAACCTGGGAAAAGAATTGGTGACCCCGGACCAGGAGGGGGTGG
CGCCGCAAccgaagaaaaacaaaagaagggACACGAGCTTAAAGTTTTGG
ATGGAAAAACTGCTCAAAATCTTTccattttcgtTGGATCATTTGGTTCC
AAAATGTCGTATGAGGATATCAAGAAGAGAATTCTGGAGTTTGATGAAGA
AATTATCGACAGCAGCGCTCTTGAGAACATGCAAAAATTACTACCAACTA
AAGAACAGATGGACCAACTGAAAGCATTCCAAAGTGAATATGACCATCTC
AATAAATCAGAACAGTTTGCCTTGGTTATCTCATCGATTCCTCGGTTAGA
ACAACGTATCAATTGCATGAAAGCCAAACTTGACTTCCTCGAACAAATGG
TTGACGTTAAACCGGATCTTGCGAATGCCATTGAATCATGCAAAGAAGTT
AAAAACAGCCCAAGGTGGTCCAGATTCTTAGAGctctTGTTACTGGTGGG
AAACTACATGAACTCTGGCACCAAGAAATCACAAGCTTTTGGTTTTGATT
TGAACGTGTTGACCAAGATTGGCAACACAAAATCAGCAGACGGTAAATTG
ACGTTAACACATTTCTTAGCTGAGATGATCCAAGAAAAATATCCTGAAGT
CGATGGATGGGAAAACGATCTGTCTCATCTTAAAGAAGGCCATCGAGTAT
CAGACGAGCAAACGACGAAAACAGTGAACGGTTTGAATGCCATGTTGACG
AGGATTCGAAACGAATTGAAACATCATGATACGCCTTTCTCTGCTGATGA
TAAATTTGGAAACAAAATGACCGTATCTTTTCACGCCTGACCACCACCTC
CTCCACCTCCACCAGGTTTTGGCCCACCTCCACCGCCCCCACCTCCAGGA
CCACCAGGTATGGGAGGACCTCCCCCACCACCTCCTCCTCCTGGAGGTGG
TCCACCAGGACCGCCACCCCCACCAGGGGCTCCCCCACCACCAGGAGGAT
TTAGAGCTGGTCCTCAACTTCCTGCTGGATTAacacaaaagaagaaattc
aacCCTAAGAAACAACCGAAAAGAATTAATTGGGATCCCATTCACGTCAC
CAAAATCAAAGGCGGATCATTCTGGACCAAAGTCAAAGAAGAAAAACTGG
AGAAGGAGGATTTCTTAGATCTCTTGTCTGAAACTTTCGCATCCAAACCT
GGGAAAAGAATTGGTGACCCCGGACCAGGAGGGGGTGGCGCCGCAAccga
agaaaaacaaaagaagggACACGAGCTTAAAGTTTTGGATGGAAAAACTG
CTCAAAATCTTTccattttcgtTGGATCATTTGGTTCCAAAATGTCGTAT
GAGGATATCAAGAAGAGAATTCTGGAGTTTGATGAAGAAATTATCGACAG
CAGCGCTCTTGAGAACATGCAAAAATTACTACCAACTAAAGAACAGATGG
ACCAACTGAAAGCATTCCAAAGTGAATATGACCATCTCAATAAATCAGAA
CAGTTTGCCTTGGTTATCTCATCGATTCCTCGGTTAGAACAACGTATCAA
TTGCATGAAAGCCAAACTTGACTTCCTCGAACAAATGGTTGACGTTAAAC
CGGATCTTGCGAATGCCATTGAATCATGCAAAGAAGTTAAAAACAGCCCA
AGGTGGTCCAGATTCTTAGAGctctTGTTACTGGTGGGAAACTACATGAA
CTCTGGCACCAAGAAATCACAAGCTTTTGGTTTTGATTTGAACGTGTTGA
CCAAGATTGGCAACACAAAATCAGCAGACGGTAAATTGACGTTAACACAT
TTCTTAGCTGAGATGATCCAAGAAAAATATCCTGAAGTCGATGGATGGGA
AAACGATCTGTCTCATCTTAAAGAAGGCCATCGAGTATCAGACGAGCAAA
CGACGAAAACAGTGAACGGTTTGAATGCCATGTTGACGAGGATTCGAAAC
GAATTGAAACATCATGATACGCCTTTCTCTGCTGATGATAAATTTGGAAA
CAAAATGACCGTATCTTTTCACGCCTGACCACCACCTCCTCCACCTCCAC
CAGGTTTTGGCCCACCTCCACCGCCCCCACCTCCAGGACCACCAGGTATG
GGAGGACCTCCCCCACCACCTCCTCCTCCTGGAGGTGGTCCACCAGGACC
GCCACCCCCACCAGGGGCTCCCCCACCACCAGGAGGATTTAGAGCTGGTC
CTCAACTTCCTGCTGGATTAacacaaaagaagaaattcaacCCTAAGAAA
CAACCGAAAAGAATTAATTGGGATCCCATTCACGTCACCAAAATCAAAGG
CGGATCATTCTGGACCAAAGTCAAAGAAGAAAAACTGGAGAAGGAGGATT
TCTTAGATCTCTTGTCTGAAACTTTCGCATCCAAACCTGGGAAAAGAATT
GGTGACCCCGGACCAGGAGGGGGTGGCGCCGCAAccgaagaaaaacaaaa
gaagggACACGAGCTTAAAGTTTTGGATGGAAAAACTGCTCAAAATCTTT
ccattttcgtTGGATCATTTGGTTCCAAAATGTCGTATGAGGATATCAAG
AAGAGAATTCTGGAGTTTGATGAAGAAATTATCGACAGCAGCGCTCTTGA
GAACATGCAAAAATTACTACCAACTAAAGAACAGATGGACCAACTGAAAG
CATTCCAAAGTGAATATGACCATCTCAATAAATCAGAACAGTTTGCCTTG
GTTATCTCATCGATTCCTCGGTTAGAACAACGTATCAATTGCATGAAAGC
CAAACTTGACTTCCTCGAACAAATGGTTGACGTTAAACCGGATCTTGCGA
ATGCCATTGAATCATGCAAAGAAGTTAAAAACAGCCCAAGGTGGTCCAGA
TTCTTAGAGctctTGTTACTGGTGGGAAACTACATGAACTCTGGCACCAA
GAAATCACAAGCTTTTGGTTTTGATTTGAACGTGTTGACCAAGATTGGCA
ACACAAAATCAGCAGACGGTAAATTGACGTTAACACATTTCTTAGCTGAG
ATGATCCAAGAAAAATATCCTGAAGTCGATGGATGGGAAAACGATCTGTC
TCATCTTAAAGAAGGCCATCGAGTATCAGACGAGCAAACGACGAAAACAG
TGAACGGTTTGAATGCCATGTTGACGAGGATTCGAAACGAATTGAAACAT
CATGATACGCCTTTCTCTGCTGATGATAAATTTGGAAACAAAATGACCGT
ATCTTTTCACGCCTGACCACCACCTCCTCCACCTCCACCAGGTTTTGGCC
CACCTCCACCGCCCCCACCTCCAGGACCACCAGGTATGGGAGGACCTCCC
CCACCACCTCCTCCTCCTGGAGGTGGTCCACCAGGACCGCCACCCCCACC
AGGGGCTCCCCCACCACCAGGAGGATTTAGAGCTGGTCCTCAACTTCCTG
CTGGATTAacacaaaagaagaaattcaacCCTAAGAAACAACCGAAAAGA
ATTAATTGGGATCCCATTCACGTCACCAAAATCAAAGGCGGATCATTCTG
GACCAAAGTCAAAGAAGAAAAACTGGAGAAGGAGGATTTCTTAGATCTCT
TGTCTGAAACTTTCGCATCCAAACCTGGGAAAAGAATTGGTGACCCCGGA
CCAGGAGGGGGTGGCGCCGCAAccgaagaaaaacaaaagaagggACACGA
GCTTAAAGTTTTGGATGGAAAAACTGCTCAAAATCTTTccattttcgtTG
GATCATTTGGTTCCAAAATGTCGTATGAGGATATCAAGAAGAGAATTCTG
GAGTTTGATGAAGAAATTATCGACAGCAGCGCTCTTGAGAACATGCAAAA
ATTACTACCAACTAAAGAACAGATGGACCAACTGAAAGCATTCCAAAGTG
AATATGACCATCTCAATAAATCAGAACAGTTTGCCTTGGTTATCTCATCG
ATTCCTCGGTTAGAACAACGTATCAATTGCATGAAAGCCAAACTTGACTT
CCTCGAACAAATGGTTGACGTTAAACCGGATCTTGCGAATGCCATTGAAT
CATGCAAAGAAGTTAAAAACAGCCCAAGGTGGTCCAGATTCTTAGAGctc
tTGTTACTGGTGGGAAACTACATGAACTCTGGCACCAAGAAATCACAAGC
TTTTGGTTTTGATTTGAACGTGTTGACCAAGATTGGCAACACAAAATCAG
CAGACGGTAAATTGACGTTAACACATTTCTTAGCTGAGATGATCCAAGAA
AAATATCCTGAAGTCGATGGATGGGAAAACGATCTGTCTCATCTTAAAGA
AGGCCATCGAGTATCAGACGAGCAAACGACGAAAACAGTGAACGGTTTGA
ATGCCATGTTGACGAGGATTCGAAACGAATTGAAACATCATGATACGCCT
TTCTCTGCTGATGATAAATTTGGAAACAAAATGACCGTATCTTTTCACGC
CTGACCACCACCTCCTCCACCTCCACCAGGTTTTGGCCCACCTCCACCGC
CCCCACCTCCAGGACCACCAGGTATGGGAGGACCTCCCCCACCACCTCCT
CCTCCTGGAGGTGGTCCACCAGGACCGCCACCCCCACCAGGGGCTCCCCC
ACCACCAGGAGGATTTAGAGCTGGTCCTCAACTTCCTGCTGGATTAacac
aaaagaagaaattcaacCCTAAGAAACAACCGAAAAGAATTAATTGGGAT
CCCATTCACGTCACCAAAATCAAAGGCGGATCATTCTGGACCAAAGTCAA
AGAAGAAAAACTGGAGAAGGAGGATTTCTTAGATCTCTTGTCTGAAACTT
TCGCATCCAAACCTGGGAAAAGAATTGGTGACCCCGGACCAGGAGGGGGT
GGCGCCGCAAccgaagaaaaacaaaagaagggACACGAGCTTAAAGTTTT
GGATGGAAAAACTGCTCAAAATCTTTccattttcgtTGGATCATTTGGTT
CCAAAATGTCGTATGAGGATATCAAGAAGAGAATTCTGGAGTTTGATGAA
GAAATTATCGACAGCAGCGCTCTTGAGAACATGCAAAAATTACTACCAAC
TAAAGAACAGATGGACCAACTGAAAGCATTCCAAAGTGAATATGACCATC
TCAATAAATCAGAACAGTTTGCCTTGGTTATCTCATCGATTCCTCGGTTA
GAACAACGTATCAATTGCATGAAAGCCAAACTTGACTTCCTCGAACAAAT
GGTTGACGTTAAACCGGATCTTGCGAATGCCATTGAATCATGCAAAGAAG
TTAAAAACAGCCCAAGGTGGTCCAGATTCTTAGAGctctTGTTACTGGTG
GGAAACTACATGAACTCTGGCACCAAGAAATCACAAGCTTTTGGTTTTGA
TTTGAACGTGTTGACCAAGATTGGCAACACAAAATCAGCAGACGGTAAAT
TGACGTTAACACATTTCTTAGCTGAGATGATCCAAGAAAAATATCCTGAA
GTCGATGGATGGGAAAACGATCTGTCTCATCTTAAAGAAGGCCATCGAGT
ATCAGACGAGCAAACGACGAAAACAGTGAACGGTTTGAATGCCATGTTGA
CGAGGATTCGAAACGAATTGAAACATCATGATACGCCTTTCTCTGCTGAT
GATAAATTTGGAAACAAAATGACCGTATCTTTTCACGCCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032808XLOC_032808Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051828-exon-scaffold_205-1491911889:319677..320150TCONS_00051828-exon-scaffold_205-1491911889:319677..320150Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:319677..320150TCONS_00051828-exon-scaffold_205-1510915933:319677..320150Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:319677..320150TCONS_00051828-exon-scaffold_205-1575043694:319677..320150Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1491911889:320302..320405TCONS_00051828-exon-scaffold_205-1491911889:320302..320405Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:320302..320405TCONS_00051828-exon-scaffold_205-1510915933:320302..320405Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:320302..320405TCONS_00051828-exon-scaffold_205-1575043694:320302..320405Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1491911889:320469..320498TCONS_00051828-exon-scaffold_205-1491911889:320469..320498Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:320469..320498TCONS_00051828-exon-scaffold_205-1510915933:320469..320498Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:320469..320498TCONS_00051828-exon-scaffold_205-1575043694:320469..320498Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1491911889:320649..320717TCONS_00051828-exon-scaffold_205-1491911889:320649..320717Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:320649..320717TCONS_00051828-exon-scaffold_205-1510915933:320649..320717Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:320649..320717TCONS_00051828-exon-scaffold_205-1575043694:320649..320717Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1491911889:321034..321120TCONS_00051828-exon-scaffold_205-1491911889:321034..321120Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:321034..321120TCONS_00051828-exon-scaffold_205-1510915933:321034..321120Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:321034..321120TCONS_00051828-exon-scaffold_205-1575043694:321034..321120Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1491911889:321236..321304TCONS_00051828-exon-scaffold_205-1491911889:321236..321304Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:321236..321304TCONS_00051828-exon-scaffold_205-1510915933:321236..321304Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:321236..321304TCONS_00051828-exon-scaffold_205-1575043694:321236..321304Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1491911889:321489..321572TCONS_00051828-exon-scaffold_205-1491911889:321489..321572Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:321489..321572TCONS_00051828-exon-scaffold_205-1510915933:321489..321572Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:321489..321572TCONS_00051828-exon-scaffold_205-1575043694:321489..321572Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1491911889:321688..321817TCONS_00051828-exon-scaffold_205-1491911889:321688..321817Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:321688..321817TCONS_00051828-exon-scaffold_205-1510915933:321688..321817Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:321688..321817TCONS_00051828-exon-scaffold_205-1575043694:321688..321817Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1491911889:322273..322951TCONS_00051828-exon-scaffold_205-1491911889:322273..322951Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1510915933:322273..322951TCONS_00051828-exon-scaffold_205-1510915933:322273..322951Clytia hemisphaericaexon
TCONS_00051828-exon-scaffold_205-1575043694:322273..322951TCONS_00051828-exon-scaffold_205-1575043694:322273..322951Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051828-proteinTCONS_00051828-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:319677..322951 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.5197	26.8328	15.9178	13.9372	90.5637	71.1795	83.6637	92.7258	58.9439	72.5601	62.1833	53.0939	65.6092	65.6667	51.1579	58.5296	62.6589	61.5623	51.22	54.3287	45.077	49.297	38.6948	41.9704	51.5499	48.402	48.7915	44.6625	48.6707	51.9291
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015425FH2_Formin
Blast
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BLAST of TCONS_00051828 vs. Swiss-Prot (Human)
Match: DIAP1 (Protein diaphanous homolog 1 OS=Homo sapiens GN=DIAPH1 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.746e-59
Identity = 132/335 (39.40%), Postives = 208/335 (62.09%), Query Frame = 3 
Query:  168 AGPQLPAGLTXXXXXXXXXXXXRINWDPIHVTKIKGGSFWTXXXXXXXXXXXXXXXXSETFASKXXXXXXXXXXXXXXAATEEKQKKGHELKVLDGKTAQNLSIFVGSFGSKMSYEDIKKRILEFDEEIIDSSALENMQKLLPTKEQMDQLKAFQSEYDHLNKSEQFALVISSIPRLEQRINCMKAKLDFLEQMVDVKPDLANAIESCKEVKNSPRWSRFLELLLLVGNYMNSGTKKSQAFGFDLNVLTKIGNTKSADGKLTLTHFLAEMIQEKYPEVDGWENDLSHLKEGHRVSDEQTTKTVNGLNAMLTRIRNELKHHDTPFSADDKFGNKMT 1172
            A P LP GLT KK + P+ Q +R NW  +    +    FWTKVKE++ E  +    L+ TF+++           GG      ++KK  ELKVLD KTAQNLSIF+GSF  +M Y++IK  ILE +E ++  S ++N+ K +P  EQ+  L   + EYD L +SEQF +V+ ++PRL  R+N +  KL F EQ+ ++KP++ +   +C+E++ S  +S  LE+ LLVGNYMN+G++ + AFGF+++ L K+ +TKS D K+TL HFLAE+ +  YP+V  + ++L+H+++  RVS E   K ++ +   ++ +  ++++        DKF  KMT
Sbjct:  759 AAPVLPFGLTPKKLYKPEVQLRRPNWSKLVAEDLSQDCFWTKVKEDRFENNELFAKLTLTFSAQTKTSKAKKDQEGGEEKKSVQKKKVKELKVLDSKTAQNLSIFLGSF--RMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKDEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSESFSNLLEITLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSTDQKMTLLHFLAELCENDYPDVLKFPDELAHVEKASRVSAENLQKNLDQMKKQISDVERDVQNFPAATDEKDKFVEKMT 1091
The following BLAST results are available for this feature:
BLAST of TCONS_00051828 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIAP11.746e-5939.40Protein diaphanous homolog 1 OS=Homo sapiens GN=DI... [more]
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