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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051830 ID=TCONS_00051830|Name=TCONS_00051830|organism=Clytia hemisphaerica|type=transcript|length=941bp
CTTGGAATTTAAATCCATTGTTTCAGTCTTTTTCCCAGTCTTTTTCTCGA
AcgtcttcaaaacaaaatttgcttTGAGTATTTTTCACTATCATCCTTTT
GTgttttttagaagaaaaaaacaagcaaaaaatgctGGCAGATAATACAC
AACTAATACAAAGTGGCTTACACAAAAGAAACCATGAAGTTCAATCACGT
GACTTTGCGATCCAATCAGATGACGAGAAATTAAGAAcagaatttcatgc
tcaaaagttcaagaatcgTGTATTGATTAACATCACGCAATGTCAGAGTT
TTGGATCAGTAATAAACATCACGAAAGATGAAAATGTACCAATGACGACT
CCAAACAGTGAGATTTCAGTCAATGTTCAGTTCTTGTTAGGTGAACAACA
TCAAATGTATAAAATTATCGCCAAAAAGATCGGACAAATCGTCTTTCAAG
AAACGGAACTACCTGTTTTATTAACGCTGGCTTTGAAATCGAAGACACCA
GAAATGTTTAAGTTAGTGACTGAGAATATTGCAAAAGTTGACGTATGgga
aatgttttgatgttgggACACTTGTCAAAATTCATTATCAGACACATCAA
ATAACTTTAGTGTGTTACATACATTTGAGTAAACGCGTGGGATCGTCTTG
ATAGAGCACTAGGATACTACGAGCTAAAAAGAGGAAAAGCGACATGCACG
ACTTTGGGTCGTAGTTTTTATCTAAATTTCCTCAAAACGGACGAAATTAt
atatttcttattttgaccatctTCAATGTACTCAGTAGGGGTGCATAGTT
GTATTTTGCTATAAAACAACTAAGAATTTTACTACGGTGATGATAAGTAA
AGAATTTCTGTCTTTCTACATTACATTTTCGATCTGTATCCATCTTTCTT
TCTTGTTCAATGCGTCAtcgtttttcgatttttagtttttt Run BLAST on NCBI transcript from alignment at scaffold_205:338664..339604+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051830 ID=TCONS_00051830|Name=TCONS_00051830|organism=Clytia hemisphaerica|type=transcript|length=941bp|location=Sequence derived from alignment at scaffold_205:338664..339604+ (Clytia hemisphaerica)
CTTGGAATTTAAATCCATTGTTTCAGTCTTTTTCCCAGTCTTTTTCTCGA
AcgtcttcaaaacaaaatttgcttTGAGTATTTTTCACTATCATCCTTTT
GTgttttttagaagaaaaaaacaagcaaaaaatgctGGCAGATAATACAC
AACTAATACAAAGTGGCTTACACAAAAGAAACCATGAAGTTCAATCACGT
GACTTTGCGATCCAATCAGATGACGAGAAATTAAGAAcagaatttcatgc
tcaaaagttcaagaatcgTGTATTGATTAACATCACGCAATGTCAGAGTT
TTGGATCAGTAATAAACATCACGAAAGATGAAAATGTACCAATGACGACT
CCAAACAGTGAGATTTCAGTCAATGTTCAGTTCTTGTTAGGTGAACAACA
TCAAATGTATAAAATTATCGCCAAAAAGATCGGACAAATCGTCTTTCAAG
AAACGGAACTACCTGTTTTATTAACGCTGGCTTTGAAATCGAAGACACCA
GAAATGTTTAAGTTAGTGACTGAGAATATTGCAAAAGTTGACGTATGgga
aatgttttgatgttgggACACTTGTCAAAATTCATTATCAGACACATCAA
ATAACTTTAGTGTGTTACATACATTTGAGTAAACGCGTGGGATCGTCTTG
ATAGAGCACTAGGATACTACGAGCTAAAAAGAGGAAAAGCGACATGCACG
ACTTTGGGTCGTAGTTTTTATCTAAATTTCCTCAAAACGGACGAAATTAt
atatttcttattttgaccatctTCAATGTACTCAGTAGGGGTGCATAGTT
GTATTTTGCTATAAAACAACTAAGAATTTTACTACGGTGATGATAAGTAA
AGAATTTCTGTCTTTCTACATTACATTTTCGATCTGTATCCATCTTTCTT
TCTTGTTCAATGCGTCAtcgtttttcgatttttagtttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051830-exon-scaffold_205-1491911889:338664..339604 | TCONS_00051830-exon-scaffold_205-1491911889:338664..339604 | Clytia hemisphaerica | exon |
| TCONS_00051830-exon-scaffold_205-1510915933:338664..339604 | TCONS_00051830-exon-scaffold_205-1510915933:338664..339604 | Clytia hemisphaerica | exon |
| TCONS_00051830-exon-scaffold_205-1575043694:338664..339604 | TCONS_00051830-exon-scaffold_205-1575043694:338664..339604 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_205 | supercontig | scaffold_205:338664..339604 + |
Blast
The following BLAST results are available for this feature:
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