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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051838 ID=TCONS_00051838|Name=TCONS_00051838|organism=Clytia hemisphaerica|type=transcript|length=366bp
AGAAAAAAGAGCTTGGTTTTGAATTGAAATCTCATCAATTTGCAAACTAT
GTTCTACAAAGATTTGATCGGACCGTGTCTTCCTCTAGTGACACTGAAGA
AGAAATACTTGCTGATGAAATTTCTTATGTAGTGTCGGATAAAAGTGTAG
ATGTAACCAGATGTAACTGGTGTTGGCAGTGTTGCAGATCCTCGTGACAG
TGAAACAACAACAAATCATAATACGAGTGTTAGTGACACGTATTAACTTA
CTGGATGAGACTAATCAACAACACATCGGTGACAACttatttcaattctt
caaaGTACTACACCACAAGAAGAAATGATaactttctttcaaaagttgCA
AAAATTGGACGTAAAA Run BLAST on NCBI transcript from alignment at scaffold_205:15150..16372- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051838 ID=TCONS_00051838|Name=TCONS_00051838|organism=Clytia hemisphaerica|type=transcript|length=1223bp|location=Sequence derived from alignment at scaffold_205:15150..16372- (Clytia hemisphaerica)
AGAAAAAAGAGCTTGGTTTTGAATTGAAATCTCATCAATTTGCAAACTAT
GTTCTACAAAGATTTGATCGGACCGTGTCTTCCTCTAGTGACACTGAAGA
AGAAATACTTGCTGATGAAATTTCTTATGTAGTGTCGGATAAAAGTGTAG
ATGTAACCAGATGTAACTGGTGTTGGCAGTGTTGCAGATCCTCGTGACAG
TGAAACAACAACAAATCATAATACGAGTGTTAGTGACACGTATTAACTTA
CTGGATGAGACTAATCAACAACAGTAAGTTGTTTTAATTGATTATTTGAT
GGTGTGTGCTTGTCTTAAATCTGTTAGTTGAAAAAATCTCTGCGTTAAAA
CATGAACTCTTTTCCTGCTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTTAATTGATTATTTGATGGTGTGTGCTTGTCTTAAA
TCTGTTAGTTGAAAAAATCTCTGCGTTAAAACATGAACTCTTTTCCTGCT
TAAACTTGACTTTTTTGTTATTAAATCAACTTCTAATGTTCCAATCCAGA
CCCGATCAATCGAACTTGCCGAACCAATCGAACAATCGAACTAATCAAAC
TCCATCGAACGATTAAAGTTCGATCAAAAAAATTAATCGAACCTAATCGC
ACACTCACAATTTTTGAAGCAATAGCAGTTCGATTAGTTCGGTCAGTAAA
AACAAGTCCAATTAAAATCAATAAAAAAGAGGAGATATCAATCGATTAAT
TTTCCAATCTTTTTGGATTATATATAATAACAGTAGAGTTTTTCACGAGC
CTGATTACATAGTTCGATTGTTTATCGATTTATATTTATTTTTTCTTAAT
CATTTATCGATCGAGAATATCTGAGATAAAAACCTCTTGTACTTTTAAAT
TCTGAAATTATGAAAAACTTAACTGATCTCTTGAGCTAGTAGAAAAGTCT
TTTTTATTTTCATTTTTTTATATTGCTGCCTTTGAATTAACATGCAAATG
GTTGAATAGAAAAGGAATTTTTTGATTTAGTGAGAGGAAATTAATTAGAA
AATAGTAATTTTGTCTCATCTTCAGTTATCTCTTCAAAAAGTACCATAAT
GAATACTCATTCCCTCTTTTTCAATCTCAGCATCGGTGACAACTTATTTC
AATTCTTCAAAGTACTACACCACAAGAAGAAATGATAACTTTCTTTCAAA
AGTTGCAAAAATTGGACGTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051838-exon-scaffold_205-1575043694:16100..16372 | TCONS_00051838-exon-scaffold_205-1575043694:16100..16372 | Clytia hemisphaerica | exon |
| TCONS_00051838-exon-scaffold_205-1575043694:15150..15242 | TCONS_00051838-exon-scaffold_205-1575043694:15150..15242 | Clytia hemisphaerica | exon |
| TCONS_00051838-exon-scaffold_205-1510915933:16100..16372 | TCONS_00051838-exon-scaffold_205-1510915933:16100..16372 | Clytia hemisphaerica | exon |
| TCONS_00051838-exon-scaffold_205-1510915933:15150..15242 | TCONS_00051838-exon-scaffold_205-1510915933:15150..15242 | Clytia hemisphaerica | exon |
| TCONS_00051838-exon-scaffold_205-1491911889:16100..16372 | TCONS_00051838-exon-scaffold_205-1491911889:16100..16372 | Clytia hemisphaerica | exon |
| TCONS_00051838-exon-scaffold_205-1491911889:15150..15242 | TCONS_00051838-exon-scaffold_205-1491911889:15150..15242 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_205 | supercontig | scaffold_205:15150..16372 - |
Blast
The following BLAST results are available for this feature:
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