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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051854 ID=TCONS_00051854|Name=TCONS_00051854|organism=Clytia hemisphaerica|type=transcript|length=673bp
TTAGTTTATTTTACTTCTATCGAGGTGTATCTGCTGCAAGTCGAAAAGAG
CTGGAGTTTATCGAAAAACAACGGGCTGGAAGTATCGGTTCACTTGATCA
TGGAATCCGTAAAATCAAAACCGAACTATACAACGAAAGTGTCCGACAAA
AAGAAATTACATATTTAGAACGAAGACTTCGACCTTCGGTAGGGGAAAAC
CAGAACCCGAATATTACTTCAGCAAACTCCagtaaacagaaaaatcaaca
aaagacCAGACTCAGTACCAAAGATGCTGCCTTTATGGAGCGACAACGTT
TGGTGTATATGGTGGACCAGATCAAAGGAATTCCtctttttgataaagaa
aaccAAGAAGTCGAAGATAGTATTATTAGTAACACTGTAAAAGAAAATCC
TGGACAGCAATTAAAATCTGACAAATGATTtacctaaaattatttttgaa
agcgAAAAAACTTCAACTACCGTATCAGACTGTAAtgaaaaacgaaagta
ctctgaAAAAGTGTCTTATTTATCAATATCTGGTATCAACTCTGGcatta
attaaaaaaacaagaTGACCCAGACTCTTATATGTTgaacttttaatatt
ttttaatcacGATTAATCTGAACAAAGATGAGTCAATTTTGAATCAATGT
TACTGATTACCCTTTCCGTGTCC Run BLAST on NCBI transcript from alignment at scaffold_205:86520..87915- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051854 ID=TCONS_00051854|Name=TCONS_00051854|organism=Clytia hemisphaerica|type=transcript|length=1396bp|location=Sequence derived from alignment at scaffold_205:86520..87915- (Clytia hemisphaerica)
TTAGTTTATTTTACTTCTATCGAGGTAAAAGGTCTCATCTTGAAATTAGT
GGCTGAGTGAGAAAAGTACAAAATTTCTGCCAATTTGAATTTCCGAAATT
GCCTCTTTTTCGTACAGTTGTGAAGTCGATCCCATATCTACATAGGAATG
GGCTAATGTAAAAATCGAAGATTAGCCATTCTTTGATTTCTAGAATACTC
ATTTTTTTAGAATTGAAATTTTTTTTCTTGACGACAGTTTGTTTGTTTTA
TTTGAATGACGGCAAAATTCGCAACGAGTACGAGTAATGACGCAACTATT
CGCGATTTATGTATCACGTTTTATGACATCGAGAGTTCCGACTGCGTAAT
GTCTATATGACGTAGAAACCAAGTTGTTTTCCCCACGTTCGCTAGCCATA
AAGTAGATTAAGTTAAGTGTCTTTCGTGGAGAGTAGCTAATGCCAATACC
GAAAAATGTAAAGGAGAAATATTTTCATAGAAATCAATTCGCGACATGAA
ACTGTTTTCTTTAACACATCTAATTAGTCCGTCTGAATTGCCACCTTCTT
GCAAATTTCTAAAGGACGTTTAGTATCACAAAATTAGAGCTTAATTAGCA
ATTCTTCGCTAACCCTGTTCAGTGTTTCGACCTAAAAAAACTTTTTAGTA
GAAAGACTCTTCTTTTTGGAATGAAGAAGGAAAGAGATGCGTAATCGAGG
TCAAATTCATTTTGATCTTTATATTTTATCCTTATTGTCCAATTCAGGTG
TATCTGCTGCAAGTCGAAAAGAGCTGGAGTTTATCGAAAAACAACGGGCT
GGAAGTATCGGTTCACTTGATCATGGAATCCGTAAAATCAAAACCGAACT
ATACAACGAAAGTGTCCGACAAAAAGAAATTACATATTTAGAACGAAGAC
TTCGACCTTCGGTAGGGGAAAACCAGAACCCGAATATTACTTCAGCAAAC
TCCAGTAAACAGAAAAATCAACAAAAGACCAGACTCAGTACCAAAGATGC
TGCCTTTATGGAGCGACAACGTTTGGTGTATATGGTGGACCAGATCAAAG
GAATTCCTCTTTTTGATAAAGAAAACCAAGAAGTCGAAGATAGTATTATT
AGTAACACTGTAAAAGAAAATCCTGGACAGCAATTAAAATCTGACAAATG
ATTTACCTAAAATTATTTTTGAAAGCGAAAAAACTTCAACTACCGTATCA
GACTGTAATGAAAAACGAAAGTACTCTGAAAAAGTGTCTTATTTATCAAT
ATCTGGTATCAACTCTGGCATTAATTAAAAAAACAAGATGACCCAGACTC
TTATATGTTGAACTTTTAATATTTTTTAATCACGATTAATCTGAACAAAG
ATGAGTCAATTTTGAATCAATGTTACTGATTACCCTTTCCGTGTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051854-exon-scaffold_205-1575043694:87892..87915 | TCONS_00051854-exon-scaffold_205-1575043694:87892..87915 | Clytia hemisphaerica | exon |
| TCONS_00051854-exon-scaffold_205-1575043694:86520..87168 | TCONS_00051854-exon-scaffold_205-1575043694:86520..87168 | Clytia hemisphaerica | exon |
| TCONS_00051854-exon-scaffold_205-1510915933:87892..87915 | TCONS_00051854-exon-scaffold_205-1510915933:87892..87915 | Clytia hemisphaerica | exon |
| TCONS_00051854-exon-scaffold_205-1510915933:86520..87168 | TCONS_00051854-exon-scaffold_205-1510915933:86520..87168 | Clytia hemisphaerica | exon |
| TCONS_00051854-exon-scaffold_205-1491911889:87892..87915 | TCONS_00051854-exon-scaffold_205-1491911889:87892..87915 | Clytia hemisphaerica | exon |
| TCONS_00051854-exon-scaffold_205-1491911889:86520..87168 | TCONS_00051854-exon-scaffold_205-1491911889:86520..87168 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_205 | supercontig | scaffold_205:86520..87915 - |
Blast
The following BLAST results are available for this feature:
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