TCONS_00051858 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051858
Unique NameTCONS_00051858
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2662

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051858 ID=TCONS_00051858|Name=TCONS_00051858|organism=Clytia hemisphaerica|type=transcript|length=2662bp
CGGTGTTTTTCTCATCAGAAATAAACAAGCCTTTTCTTGTTCCGAAAGGT
CAGAACAAAAAATCGTGGTTCTCAAAACAGACATGTCGGAAAATGAGGAT
GAATACCAAGAATTTACAAACTATAATTCATCAACAATAATCAGAAAAAG
ATATGAAATTACTGAAAAAACTGGTGATCCAGATAGAGACTATATAAATG
CACCAATAGATGCACTTGGGCCACCTGGGAGATGGATTCGTCACAAACTt
ttagagagtattttatatgGAACACCAGTATTGGTGGCTATTCAGcaACT
CAGGacaaaaaagtttacaaaaataatgaaatttgcAAGCATACTTGGAA
CAGAGGAATTTTATGCAGTTTTATTATGCTTCTTGACATGGATTGTAGAC
CTACGACTTGGTCGTTTAGCATCAATTGCAATGGGAATAGGATTTTATGT
GGCTAATGCAGTCAAGAATGCATTTTGTTTACCCAGACCTCCCAGTCCAC
CAGTCCGACCTTTAGAAGATGCTTATTACACTTGgGGTCTTCCAAGTCAT
CATTCAGTATTAGCAGTCATCTGCCCATGGTACATATGGTTTTACGTTCT
TCAGCATTATCATTTTCAAGTCACTACCCTTGTTTGTCTTTTCTCCTTCA
TCACATTATGGTCATTTATGGTAATGTTGTGTCGGATATACAATGGTGTT
CATAGCCCAGCTGATGTTGTGACAGGCAGTCTTTTGGGTGTCATGATTGT
TGCATTCATGAACAGATTTGACAACGAGATTGACCTCTCGTCAGTTATGA
ATGGACAAAGTGCTCTTATTTTGCCGATTTGGTTAGCTATTCTGTTGATT
TTACATCCATTCAATGATGTTGGGATCCCTGCATTTGAAGAAACGAACTC
GATGGCTAGTTGTTCAGTTGGCATTATGCTTGGCAAAGCCTTTTCGCATG
GAAAGTCACCACACTTCAAAGCCCTTCTTGAAACTTATATCCCTGGTGCG
TTCAGTTTGTATTCTATTTGATTTACCccatatatattatatatatgaag
aaagaaatcaaattgtTGACGTCATTGGAtcgaaaataaggaaaaattgA
ATAATGTGAATAATTTATGGgacagtgtttttcattttctgtttTATCCT
CGTGTTTGtaattttccttcttttttctATCCATGCtatgaaaaattaag
atttcTCCCCCTCTGTCGTTCTCTATGGTTCGTTTATTGACTCATTTtta
atcaatttcaacaatcGAATACGTCATTTAGACGCGTGCCCTAGTAATAG
TATGATTCGGTAACTCGAGCTAAACTGCCGAAGGGTTCTTGCCATCGCTG
TTTTATCAacgcttttataaaaaaatattcactTTAGACTGTCTGCTTGA
CATGCATGTTATTATATCCAAATAGATTGTAGATGACCTGCTATTTTTTG
TGAACTTGTTTGTCACGTGATTACTTTTCTATTTCTTACGAAATTTAGGA
GAGACGTCTATCTTCAAAGCTATCTTGTTTGGATTTCTGAGATACCTAAT
TGGTGTCATTTTCGTCGTACTCGCCAAAGAAGTGtcgaaatttttaacaa
atttggTCATCTCCACCTTttgcaaaatcttcaaaatcaatTACATCAAG
AAAAGTCCACGAAGCAAATTTTATACAGGCTACACTGAAAATTATCTTCT
ACCGCCGATATACAAAGATAGGAAACGTGGCGAAGACGATGATGATGTTG
ATGATGGAGTGATGGAAGAAAAAAGTGCAACGACTTCAACAACCAAAGAA
GAAGTGTGGAACATAGGACATTATTCACGTTTCGTTTCATACATGTGTAT
GGGATTTGTTGCTTATTATTGCAACAATTTATTTTACCAGTATGTTGGTT
TGGTCCTGTAATATTACCAGCTTTTTTGTTGGATTTCCATAACTTAGATA
CCGAGCTCTAGCTTAGAGGTGTTTCAACGAGCACCTGAAATTGAGATATT
CTGAGGCTCCTTGGTGTACCAGTACTGGAAGACCCTGACTGAATCGATAA
AAAATCAGTTCCAGAATTGTTTTTATCCTCAATATAAGCCCATTTTCTCA
GAAAAATGAGAGCTCAAATACCAACGAACGAGTCCAACTCTTTTCTCCTC
GATTCTTTATCCTCCAATAGactttatgtatttgtttattcATACAATTG
ATTTGCATTCTTTTGTAACCTCTCTGGTTTTTCCTGCCAAGCTTCCCGAC
AAACGACTGAAATAAATCCAAGCTCATCTTAGGTACGTGATTCGAAACTC
GGCAATAATCTACTGACTCTTTGTAGATCGTTTTAGTGAGCCAGTGCGAA
CGATTTATGGTGAATATGAAGAATTTTTATTGTAGTTCTCTTTCTATTTT
TTGAGCATCTCTCTcgtgcattttcattttttttcctttagaTGAATTAT
TATGTTATTGTATCTTTATCTTTGTACAGATTttatttgaatttgttttt
tatatatataattTTACTAAAAATGATGAAGCTCTGGATACTATGAATAC
ATGTTTACGGTCAACCTGTTCTCTCTCTTCCTGTAATTTTCAGTAGTTTt
aatgataaataaataaataaaaattttgtacCCTATATGTCTGAATAAGA
GGCTTCTTTCCA
Run BLAST on NCBI

transcript from alignment at scaffold_205:108043..119787-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051858 ID=TCONS_00051858|Name=TCONS_00051858|organism=Clytia hemisphaerica|type=transcript|length=11745bp|location=Sequence derived from alignment at scaffold_205:108043..119787- (Clytia hemisphaerica)
CGGTGTTTTTCTCATCAGAAATAAACAAGCCTTTTCTTGTTCCGAAAGGT
CAGAACAAAAAATCGTGGTTCTCAAAACAGACATGTCGGAAAATGAGGAT
GAATACCAAGAATTTACAAACTATAATTCATCAACAATAATCAGAAAAAG
ATATGAAATTACTGAAAAAACTGGTGATCCAGATAGAGACTATATAAATG
CACCAATAGGTAAGATCGTGTGTTTTTTTTCTTTCAATTTATATTGTTTT
TTAAAGGTGAAGAAGAAGATATCCCTAAAATTCTGGCCACCGCCACCAAA
AAGCCATCAGTTACCATCTCAGAAACAGTTTGATTTTCGAACCCTAACTG
TGATTTGGTCTAATGTCCACTCAACCCCATCTAATTCCAGCACCTTTATA
TATACAGAGGTAGGAAAAATAGGAAGCTTGGAATCACTGATTTGATTGAG
AAGATGTTTTCACCTCTGCTCTGGCCAAACCAAAGAAGTAAAATTTCAAT
CTGGGATTCTGGCCTTCCCATTAATCTCTGCTCTAATGAAGGTTGTCTGA
ATGATATTTCGAATAATTACTGTGGGATTGGGTAACTTGCATCAGTGGAG
GCTAACATGCATAGCCCTCAAGTGAAAGACCTGGCTGGTCATCATTAAAA
TACAAAGTTAAATCAAAACAAAAATGATAGAGTAGAGCTGGGAGCGGAGT
TGCGTAGTTGTATATTAATGACCAGACAGGTCAGTCAGGCACATCCTGGC
AAATGAACGGGTTGAGCATTTGCATGGGGACGACCCTGCCTATGCCCCGG
ACAGTCCTGGGCAAATGTCTGGGGTCTGAAAAAAATAACTTTTTCCCCGG
ACCTACGTCCGGGGCTCCAATTTTTGCGCCATAAATTTACCCCGGACGTA
TATCGCCGAGCACACTTTAAACCCCCGGACGGCGTTTGTCCACGGAAGAA
TATTTCAACGAATTAGAAAAAAGCCCGCGCGGTCAGCGATTCTATAAAAA
GCGACCGCGCGGTGGGCTGTCTGGGGCGTCCGGGGTAGTCTCTTCAAAAA
CAAATAATACGGACCCCGGGCACGCATCAAAAAAACCCCGGACTGTCCGG
GGCATAGGCAGGGCCGTGCATGGGGTATTCCTCACCCAGTGTAAATGAGA
TAGGACGTCTCAGGCTAAAAGCGTGAAAATGAATGAAAATGAACTTCAAA
CTGAAAAAGGGAAAAAAGGAAGAAAACTGGGAACTTTATTTTTTCATTAC
AAGTTTCTTCAATCTTCAAAGACAAAATTGACCCGTGGAAAAAAAATTTC
ATCTGTGCAGTTCTTTGAAATGAAGCAAGATATTTCCAACCCGGTTCAAT
TAAACTGGGTATTCGGCGCTATTACGTCACTTTCGTTTTAGACCCCGTTC
ATTTGCCAATGGCCGCAAGTGAAAAATACCCGGTTCATTTGCCAGGATGT
GCCTGACTGCAGGTCATTCATTTGAGGGCTATGTATGTTTGCCTCCACTG
ATGGGAGTTACCCACTCTCACAGTAGAAGAGGGATGTCAACATTAGACCA
GTTTATTTTTTAATACGCGGTTTATTAAACTAAAATCAAATGACTTTGGA
GGTTCGGTGAAATGGTGGTGGAATGGCCGTCCCATGTTGGGTAAAATAGT
CCCAAGTTGGAGCAGTTGGCGGTAATTTATGAGTCAAAATGGTATTTAGT
CGAGCAAAACATGATCTCTATCTACAAGTTTTTGATCTAATGAAATGGAT
CTAAAATTGGGAGAATTTGGGATAATCTATAAAGGTAGGGTAGGGCGTCA
ACAGTCATTTTTGGGGCAAAGTCAGAAAATTCAAGATGTAGTGTTTTTTT
ATGAAAATTTAACCTATTGTGAGGCATTCTGCGCAANNNNNNNNNNNNNN
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NNNNNNTAAAAATTGCGCAGAATGCCTCACAATAGGTTAAATTTTCATAA
AAAAACACTACATCTTGAATTTTCTGACTTTGACATTTGACGCCCCACCC
TAATAAAGGGCCATTCTAGAATTTGTCTGTAACTCAGGGGACGGACGACA
CAGAATCTCCAAGGGCAAAAGTTTTTACCAAAATTCAAAATTTCCAAGGC
GATAGAAGAATAATGAATTTCCAAGGCAATTGAATTAAAAACGACAAAAA
AGAGTGGAATTTCAGACGCATCTTGCGAAAGTTCTTTCATGAATTTTCAT
CGGTTCGTCGTCCGACAGGGGTAACAAAAATTTTCTGGAATGGCCCAAAC
ACTTTGGACTGTATCAAGATTTCAAAGCGCCACTTGCTTGGCTAATCCTA
CCCAACNTTCTGGAATGGCCCAAACACTTTGGACTGTATCAAGATTTCGA
AGCGCCACTTGATTGGCTAATCCTACCCAACTTTTTAAAAGTGGATTTTA
ACTTTATATGACGTTATAATTAAAAACGTTCACATGTTTTTTTATAAGGA
ACATGTTTGTATAGGCTGCACAGACCCCCTCTGATATGTTTTGATGTAGG
GGCTGCGTGTTGTGTACCGTGAGATTGGGTTACTTGCATAGCCCTCAAAT
CAATGACCTGGTCATAAAAATACAAAGCTAAATCAAAATAAACCTGATTT
ACAATCTCTAATCATAAAAGTGATGTCATGTATATTATGTTTATTATCAT
TATTAAATTTGAGATTACACGTCCAGTAGCCATATAGAAACATCTGAATT
CCTGCCATCTTAAAATTTACAATCTCACATGATCTTTTATTTATTCAACC
ACGCTGCCATTATTTACCCTCAATTCTGTTGGCAAGCAATTTGCCAAAAA
TACTTGTGCGGCAAATATGAGATTCTAAAATGGTAGAGTAGAACTGCCTA
GCTCTTGCACTGCTACATTTGTTTTGAAATTTGCTGCTTTGGTTGGTCAG
ACATTTGGTGGTTATGCAAGTTTCCCTCCACTGATGCAAGTTACCAAATT
TCACAGTATAAAATTCTCATCCTAGAGTTACCTCCGTCTTTGTGTTTCTG
AGTTTTAGAAACTTGATTACAGTAACTTTATTATTAAAACTAAAAGCTTT
ATATATCTTAAGATATCTTTGAATTTCATTAAATTTTAATTCAAAATTTA
AATGGCTAGAGATTAATATCATTGGACTTCTGATACTATTTAAGGAAATT
GAAACAGGTTACCCCAAAACTGGGATAACTCTGGGACAAGAATTTTTTAC
GCAATACGCATCCCATATATCAAAATCAGTTCTGGGGGCGCGTCCAGCCT
AACGTTAATAAGGAACTTGAGGCTGAAAATGGTCCAAAAAATAAAGATTT
GCTAAGAATTAGTAAGAGTTAAACTTGAACTTGCACACAATTACAATAAC
CTAAACGAAAATATGATAGAATATTGCTGACATTGACATACAATGTGTCA
AAAAGAGAAAATATACTATATAAATTTTTTTTATTCTCTCCAGATGCACT
TGGGCCACCTGGGAGATGGATTCGTCACAAACTTTTAGAGAGTATTTTAT
ATGGAACACCAGTATTGGTGGCTATTCAGGTATGTTTCCAGAATTGTTTG
TAACATTTTAGCATTTTGATTTTTTAAGTGAGTTATCAAAAGTAAAGCTG
ACTAAGTTGCATTTCAAGTAGTGACTAAAGGTGAATTTTTAAGTCTGTTT
AAGACTAAGCCTACACAAATTTTTAATAATTCAAATTATTCTTTTTCCTT
TTTTTAGCAACTCAGGACAAAAAAGTTTACAAAAATAATGAAATTTGCAA
GCATACTTGGAACAGAGGAATTTTATGCAGTTTTATTATGCTTCTTGACA
TGGTAGGACATTTTTTCCAAGCATTATTATACATTAAAAGAGGTTACCCT
CCTATGAAATAAATCATATGGAGGCTGACTGGTGAACATGGTTACCTACA
TCTTCAAAAATTCAAATTGTAGATTTTACTATGCCGTACAATAATAACAT
CATCATTTATTATTCTAGGATTGTAGACCTACGACTTGGTCGTTTAGCAT
CAATTGCAATGGGAATAGGATTTTATGTGGCTAATGCAGTCAAGGTATGA
AATGTTTTTTGCTGATATTAAAAACTTTGATCCCCATGTTTCTGAATTTA
CTTCATTTTTAAATCTTGCTTGATCCAATTCTTTTCAGAATGCATTTTGT
TTACCCAGACCTCCCAGTCCACCAGTCCGACCTTTAGAAGATGCTTATTA
CACTTGGTAAGTTGTCAGACATCATGGTTTTGACCTTGTAAAAGAATTTT
TCATCCTTACATGTTTATCTTAAATAAACATGATTTTTTTAAAGTGTTTT
GACTCTTGATGATGTCATCACTGACATAACTCTCTTTCATGATTGTCTCC
TTTTCTAAATATTGTATATTCTTTTTAAAAAGGTTTTGAAAGTTTGTCTT
TTGTATTTTCCTTTTCTTTTTAGGGGTCTTCCAAGTCATCATTCAGTATT
AGCAGTCATCTGCCCATGGTGAGAACTTTAATATGATTTCTGAAATGTTA
CTCTTTTTTTGTATAGAATACAAAGTATTGTATATCAAGGTTTTGTTAAT
TTCCTCTACTGAAAATATTTTTGAAACATTTTTTGATAGAAAATATGGGC
TTCCTGTGACAAGCTTTTTTGAAATGACTTACCAAAAAAACTATTTTATT
ATAGTCGTCTGTCCACTTTGTTCTAGATTGAACTTGCCAGGGGTTACAAA
ACCCTAGTATTATCCATCAGTTTTATTGGGATGTTTTCAAACATGGCATA
AATTTCTATCTAGAGGTGTTATAACTTGAAACTTGTTCTCTACTATAGTT
TCAACTCATGAAGATTTCATTCAGAGTTACATTAGAGAGTATCCGAAATC
ACAATGATGACGGATACGGTGACTTGAAACTTTTTTTTGATACTTCTGCG
TATGTGTGAACCTCCGAGGAAATCCGTTCTACTTTCCCTCAACTCTTGTG
TTTTGATGCTGTGCCAAAATGTGAACACAAATCAGTCAAAAATAAAAACA
AACAAGACAAGATGGCTAGTAATGCAAATCCATATAATACATTTGACTAC
AAAGTCAGTTCTCGACACTTATTGCTCTGAGAATTTTGAAATAAAAAAAA
TCGAATGTTTTTTTCTGTGTTTTGAAAAAAGAAAGAAAATCGAATGTTTT
GATTTTTTCCCGCCAATAGTATTGAATTCCATTTAAAAAGCTATTGCTAC
AAGATGGATAATTTTGTTATTTTGAGAAATGACTTATACTTTACGTGGCG
TGAGAAAAAAAGCGAAATCGGAATGTAAAAGACTGCTGATTGTAACGACG
ACGGCTAAATTCACTTTCAGGTCGCCGTCGCCGTTCTCGTTCTCGTTTTG
ATTTCGGAAACTCTCTATTATTTGCAAGGGGTTATTTGTAAAAGTGCACC
AGGGTATAGCTAGATTAGGAGTTCAAGCTGTTAAGCCTACTGTATGAGGG
GATAGAGTACAAATGTAATGAATTTATTTTAATGTTCATCTCATCTTCAT
CTAGGTACATATGGTTTTACGTTCTTCAGCATTATCATTTTCAAGTCACT
ACCCTTGTTTGTCTTTTCTCCTTCATCACATTATGTAAGTTTCTATATCG
TTTTCAACTTCCCGTTGTTTTTTAACATCTACAAATGGGCCTCTTCATGA
ATTATTTTGAGTGTAATTACCATAACAATATTTTGAAAACGAGGTAAGCG
TTGTCGGTGACGTAATTTATGAAAAGGTCTGTCATTTGAAACCATCTCGA
CACCTTTGACAACAAAAATGCTGATACATGATAAGTCCAACGCAGATTTC
AGGGAACATACTAATTTTTCCATCTTACCCCAACCGAAAAAATCAAAATA
TTTAAAGGAGCAACGATTCTACTTCTTTTTATTGAAATGTAGCAAGGAAA
TAAAATTTATTGTTGTTTAAGGGTCATTTATGGTAATGTTGTGTCGGATA
TACAATGGTGTTCATAGCCCAGCTGATGTTGTGACAGGCAGTCTTTTGGG
TGTCATGATTGTTGCATTCATGAACAGATTTGACAACGAGATTGACCTCT
CGTCAGTTATGAATGGACAAAGTACGTTTTTGTTGTCACGAAATGTTCGT
AATTTTATAGCATTTCTATTGTATTGCTGGTGTGTTTTTCTACGCGTGTT
GTATTATACTGAAGTATCGTATTTCATAACAACATTCCAATATTTTATCT
TGGATTGTCTTAAGGAAAATTTTGACCTTTTCATTTTAAAAGAAATTATG
GCTACCCGAAATTATAATTTTAATGTTAAATTGCCCCTTTTTGACTTAAA
ACTTTTATATTGTTAATTCTTTCTAAATTTAACGGAATTTTTGGTTCGAT
TCTTCTCATATTTAGGTGCTCTTATTTTGCCGATTTGGTTAGCTATTCTG
TTGATTTTACATCCATTCAATGATGTTGGGATCCCTGCATTTGAAGAAAC
GGTACAGTCACTTTAAGCCTAAACATTTGATCTTCATTTCGTTGTGCACA
TTTTTATTCTTAAGATATCCCTCTAAATTCCTGTGAGGACCTCCAAATTT
GTCGTCCGATTATTTTAAACTTGTAAAGATGGGTGAAATTCCTTTATCTT
CTTAGTCAAGAAATGAACTTGTATATTTCAACTACTTTAAATAGTTTGGC
AAAACCATTCTGAGGTTTTGCTTAGGACTATGGAAGAGATTTACAAGACA
GAGGGAGCATTCAAAACTTTGCATTGAAAATATATTATTATGACATTCAA
TCATATACATTTTAGAACTCGATGGCTAGTTGTTCAGTTGGCATTATGCT
TGGCAAAGCCTTTTCGCATGGAAAGTCACCACACTTCAAAGCCCTTCTTG
AAACTTATATCCCTGGTGCGTTCAGTTTGTATTCTATTTGATTTACCCCA
TATATATTATATATATGAAGAAAGAAATCAAATTGTTGACGTCATTGGAT
CGAAAATAAGGAAAAATTGAATAATGTGAATAATTTATGGGACAGTGTTT
TTCATTTTCTGTTTTATCCTCGTGTTTGTAATTTTCCTTCTTTTTTCTAT
CCATGCTATGAAAAATTAAGATTTCTCCCCCTCTGTCGTTCTCTATGGTT
CGTTTATTGACTCATTTTTAATCAATTTCAACAATCGAATACGTCATTTA
GACGCGTGCCCTAGTAATAGTATGATTCGGTAACTCGAGCTAAACTGCCG
AAGGGTTCTTGCCATCGCTGTTTTATCAACGCTTTTATAAAAAAATATTC
ACTTTAGACTGTCTGCTTGACATGCATGTTATTATATCCAAATAGATTGT
AGATGACCTGCTATTTTTTGTGAACTTGTTTGTCACGTGATTACTTTTCT
ATTTCTTACGAAATTTAGGAGAGACGTCTATCTTCAAAGCTATCTTGTTT
GGATTTCTGAGATACCTAATTGGTAAATATTTGTTTAATTTAATGTTTTG
ATATGTTTTACACATATACTATTGTGCAACACAAGCCCTTACCACCCAAG
TTGTTTCATTACAATTTATAAAAACCATTTCTACTATTTCATATGCTTGA
CGAAAGAAAAGATCTCGGTTTTTGATACCAATCTGCCGTATTGAAATAAA
AGTCGCCCATTGTGAAACCGTATCAAATTAACATAACAAGGCACATTTCA
GCTCATTTCTCATGAATCTGATAGGAGAGAATGAGACCTATCCAATCTTA
GATTTCAGTGTAGTCTGTCGAAAACTGTATAAGGAAGGCTTTTATGATTA
AAAGCTTAAATTTTTAGTATTCCACACTCTCATACCTTTCATTTGTATAT
GAAACATTTTAAAACAATAAAAACTTTCAATTTCTCTTCTCTTTCAAGGT
GTCATTTTCGTCGTACTCGCCAAAGAAGTGTCGAAATTTTTAACAAATTT
GGTCATCTCCACCTTTTGCAAAATCTTCAAAATCAATTACATCAAGAAAA
GTCCACGAAGCAAATTTTATACAGGCTACACTGAAAATTATCTTCTACCG
CCGATATACAAAGATAGGGTAAGATTAAAATTTCTCGGTAAAGTAGGTTT
TTATTAAACTAGCGAAACCTGTCTTTCTGTACTTATTTCATTTTTAACAT
AAATCTGACCAGCGATTTTTGAACAAAATTCTTAACACGGGAGAACTAAT
TATGTGACCTGGTGGACTGATCTGAAATTTACTTTGAATTTATTCCAATT
TATAGAAACGTGGCGAAGACGATGATGATGTTGATGATGGAGTGATGGAA
GAAAAAAGTGCAACGACTTCAACAACCAAAGAAGAAGTGTGGAACATAGG
ACATTATTCACGTTTCGTTTCATACATGTGTATGGGATTTGTTGCTTATT
ATTGCAACAATTTATTTTACCAGTATGTTGGTTTGGTCCTGTAATATTAC
CAGCTTTTTTGTTGGATTTCCATAACTTAGATACCGAGCTCTAGCTTAGA
GGTGTTTCAACGAGCACCTGAAATTGAGATATTCTGAGGCTCCTTGGTGT
ACCAGTACTGGAAGACCCTGACTGAATCGATAAAAAATCAGTTCCAGAAT
TGTTTTTATCCTCAATATAAGCCCATTTTCTCAGAAAAATGAGAGCTCAA
ATACCAACGAACGAGTCCAACTCTTTTCTCCTCGATTCTTTATCCTCCAA
TAGACTTTATGTATTTGTTTATTCATACAATTGATTTGCATTCTTTTGTA
ACCTCTCTGGTTTTTCCTGCCAAGCTTCCCGACAAACGACTGAAATAAAT
CCAAGCTCATCTTAGGTACGTGATTCGAAACTCGGCAATAATCTACTGAC
TCTTTGTAGATCGTTTTAGTGAGCCAGTGCGAACGATTTATGGTGAATAT
GAAGAATTTTTATTGTAGTTCTCTTTCTATTTTTTGAGCATCTCTCTCGT
GCATTTTCATTTTTTTTCCTTTAGATGAATTATTATGTTATTGTATCTTT
ATCTTTGTACAGATTTTATTTGAATTTGTTTTTTATATATATAATTTTAC
TAAAAATGATGAAGCTCTGGATACTATGAATACATGTTTACGGTCAACCT
GTTCTCTCTCTTCCTGTAATTTTCAGTAGTTTTAATGATAAATAAATAAA
TAAAAATTTTGTACCCTATATGTCTGAATAAGAGGCTTCTTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032820XLOC_032820Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051858-exon-scaffold_205-1575043694:119579..119787TCONS_00051858-exon-scaffold_205-1575043694:119579..119787Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:113659..113744TCONS_00051858-exon-scaffold_205-1575043694:113659..113744Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:113386..113480TCONS_00051858-exon-scaffold_205-1575043694:113386..113480Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:113144..113219TCONS_00051858-exon-scaffold_205-1575043694:113144..113219Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:112982..113049TCONS_00051858-exon-scaffold_205-1575043694:112982..113049Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:112720..112764TCONS_00051858-exon-scaffold_205-1575043694:112720..112764Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:111604..111683TCONS_00051858-exon-scaffold_205-1575043694:111604..111683Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:111117..111266TCONS_00051858-exon-scaffold_205-1575043694:111117..111266Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:110737..110822TCONS_00051858-exon-scaffold_205-1575043694:110737..110822Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:109766..110422TCONS_00051858-exon-scaffold_205-1575043694:109766..110422Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:109170..109339TCONS_00051858-exon-scaffold_205-1575043694:109170..109339Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1575043694:108043..108982TCONS_00051858-exon-scaffold_205-1575043694:108043..108982Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:119579..119787TCONS_00051858-exon-scaffold_205-1510915933:119579..119787Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:113659..113744TCONS_00051858-exon-scaffold_205-1510915933:113659..113744Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:113386..113480TCONS_00051858-exon-scaffold_205-1510915933:113386..113480Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:113144..113219TCONS_00051858-exon-scaffold_205-1510915933:113144..113219Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:112982..113049TCONS_00051858-exon-scaffold_205-1510915933:112982..113049Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:112720..112764TCONS_00051858-exon-scaffold_205-1510915933:112720..112764Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:111604..111683TCONS_00051858-exon-scaffold_205-1510915933:111604..111683Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:111117..111266TCONS_00051858-exon-scaffold_205-1510915933:111117..111266Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:110737..110822TCONS_00051858-exon-scaffold_205-1510915933:110737..110822Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:109766..110422TCONS_00051858-exon-scaffold_205-1510915933:109766..110422Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:109170..109339TCONS_00051858-exon-scaffold_205-1510915933:109170..109339Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1510915933:108043..108982TCONS_00051858-exon-scaffold_205-1510915933:108043..108982Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:119579..119787TCONS_00051858-exon-scaffold_205-1491911889:119579..119787Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:113659..113744TCONS_00051858-exon-scaffold_205-1491911889:113659..113744Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:113386..113480TCONS_00051858-exon-scaffold_205-1491911889:113386..113480Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:113144..113219TCONS_00051858-exon-scaffold_205-1491911889:113144..113219Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:112982..113049TCONS_00051858-exon-scaffold_205-1491911889:112982..113049Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:112720..112764TCONS_00051858-exon-scaffold_205-1491911889:112720..112764Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:111604..111683TCONS_00051858-exon-scaffold_205-1491911889:111604..111683Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:111117..111266TCONS_00051858-exon-scaffold_205-1491911889:111117..111266Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:110737..110822TCONS_00051858-exon-scaffold_205-1491911889:110737..110822Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:109766..110422TCONS_00051858-exon-scaffold_205-1491911889:109766..110422Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:109170..109339TCONS_00051858-exon-scaffold_205-1491911889:109170..109339Clytia hemisphaericaexon
TCONS_00051858-exon-scaffold_205-1491911889:108043..108982TCONS_00051858-exon-scaffold_205-1491911889:108043..108982Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:108043..119787 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.550851	0.202076	0.235273	0.230119	0.637974	0.858627	0.263807	0.162178	0.447426	0.969366	0.538063	1.3706	0.926748	1.51501	1.24545	0.646395	0.747275	1.11597	1.06066	1.26187	1.61701	2.74773	0.714466	0.644503	0.362128	0.451209	2.0737	1.41137	0.851114	0.936328
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051858 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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