TCONS_00051875 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051875
Unique NameTCONS_00051875
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051875 ID=TCONS_00051875|Name=TCONS_00051875|organism=Clytia hemisphaerica|type=transcript|length=161bp
AAACCTTTAACCTATTCattttgttatattatgttaCTATTTTGCTTtaa
tgtttcttttgtttgagattttctttagcttgatatttttatttatttca
gttAATTAATAGCCCCTCTTCCCCTGGGCAGTAGACATGCTTGTAAGAAA
ATCAATATGGA
Run BLAST on NCBI

transcript from alignment at scaffold_205:14548..14708

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051875 ID=TCONS_00051875|Name=TCONS_00051875|organism=Clytia hemisphaerica|type=transcript|length=161bp|location=Sequence derived from alignment at scaffold_205:14548..14708 (Clytia hemisphaerica)
TCCATATTGATTTTCTTACAAGCATGTCTACTGCCCAGGGGAAGAGGGGC
TATTAATTaactgaaataaataaaaatatcaagctaaagaaaatctcaaa
caaaagaaacattaAAGCAAAATAGtaacataatataacaaaatGAATAG
GTTAAAGGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032827XLOC_032827Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051875-exon-scaffold_205-1491911889:14548..14708TCONS_00051875-exon-scaffold_205-1491911889:14548..14708Clytia hemisphaericaexon
TCONS_00051875-exon-scaffold_205-1510915933:14548..14708TCONS_00051875-exon-scaffold_205-1510915933:14548..14708Clytia hemisphaericaexon
TCONS_00051875-exon-scaffold_205-1575043694:14548..14708TCONS_00051875-exon-scaffold_205-1575043694:14548..14708Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:14548..14708 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051875 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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