TCONS_00051880 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051880
Unique NameTCONS_00051880
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051880 ID=TCONS_00051880|Name=TCONS_00051880|organism=Clytia hemisphaerica|type=transcript|length=158bp
GGGTTATTTTCTAGAGACttctattttcatttctttttatttaatcTTAC
TTGTCACTTTTTGTAGGGTCTTAGCCTGTTTGTATATAGGTGATTCAGTT
ATTGTTTGGACCTATAGTCGTTTGGGAGAACGTGACGGTACTCCAACAAA
ATGGGAAC
Run BLAST on NCBI

transcript from alignment at scaffold_205:59337..59494

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051880 ID=TCONS_00051880|Name=TCONS_00051880|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at scaffold_205:59337..59494 (Clytia hemisphaerica)
GTTCCCATTTTGTTGGAGTACCGTCACGTTCTCCCAAACGACTATAGGTC
CAAACAATAACTGAATCACCTATATACAAACAGGCTAAGACCCTACAAAA
AGTGACAAGTAAgattaaataaaaagaaatgaaaatagaaGTCTCTAGAA
AATAACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032832XLOC_032832Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051880-exon-scaffold_205-1491911889:59337..59494TCONS_00051880-exon-scaffold_205-1491911889:59337..59494Clytia hemisphaericaexon
TCONS_00051880-exon-scaffold_205-1510915933:59337..59494TCONS_00051880-exon-scaffold_205-1510915933:59337..59494Clytia hemisphaericaexon
TCONS_00051880-exon-scaffold_205-1575043694:59337..59494TCONS_00051880-exon-scaffold_205-1575043694:59337..59494Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:59337..59494 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051880 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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