TCONS_00052046 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00052046
Unique Name	TCONS_00052046
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3410

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_209:21381..41370+

transcript sequence

>TCONS_00052046 ID=TCONS_00052046|Name=TCONS_00052046|organism=Clytia hemisphaerica|type=transcript|length=3410bp
TGATCGGCGGCGAACCGGCTCAGGACATAGGGTTGTCGAACGTGAACATG
ACAATGTCTACGGTTGGTCATTAGAGCATCAATACAGCACAAGTTCCCTT
GCAAATGGTATGGCTGCTCTCAAGGGGAAAGATCGACAAATTGCAAGATC
TTTATCCGCTGCAAGTGAAGAAATGAACCCCAATGAACAGCATGCGAAAT
TATGGACGATGAAACAGAAATTAAAGAAGTGTACGACTTTGAAGGCGAGG
AGCATGATCTTAAGCATGTTTGTTTTGACATCGAAGAAGATCTTCTCGAT
TTCGAGGAGAAATATGACGGCGATATCGAATCGTTTTGGGGCGAGCATGA
CAGTGAAGAAGTCGAAGGACCAACAGGAAATGAAGGTTCGTCGCGTGATC
GCTGGTATTCAAGTTATATCATTCTCGCCATTCCTGAaagtcaaaaattc
aaattgctCTGTCAGAGTGGAATAAAGGAAAGCCTTCAACATCTGTCTGG
AGAATTTGAATCATCTTCACCAAAGTTCAAAGATCATTTCCGTACATTTT
TGACAAAGTTCAAAGCTTCTGCTTACAAGGATGAAAAGTCCTATTCCAGA
CAGCCCCAAAATATCGTCAATAAGCAACCGCCTGGTCGAAAAAGTATGAC
GAAAGTCATGTCAATGCTGGAGAAGACACGAGACCCTGACCTTACCAATT
TGTTCGTCAAGAACGTTCTTAATGGAAGTAAATCTTCATATGCATATCGT
GGTGATGGCGAAATCTTCAGCATCTATTACGAGAACATCGAGAAACCTGT
AGCCGATTTGCTGAAATCAGTATCGTGGGAATCCATTAAAGAGGAAGTTG
AATCTGTCATCGTTGCGTCTCCAATTAACCATTATCTCCGATGGGCGAAA
GCTTACAACCATAATGGCATCACAGAAATCGCGCACAAAATCATAGAGCA
GTGTCTACAAAAGGTGGAAAAACTAACCGGAGAAGAGTTCTACCCTTTAT
GGGGAGAAATCTTTTCACTGATCTTCAACAATGAATTGTTTGGCACACGA
TGGTGGGATTCAATCATGACTTGCACTCAAATTATCTCCAACCTTCCACT
TCTTTCCCACTTGTGCTCTCGTTTGTCTCCTGAAAACCAGACAAAGTTTC
CGCGCCTCTTTGACGGATTAATCGACCTCATGAAACAACCAACTACATCG
CATTCTAACGATactcttgcatcaaatttgTTCTCGGCTATAAAACAAAT
TATTGAAGACTTATTCTATATAAGAAAACTTCAAGAGCTTTGCGACGCCC
TCGTTGCAAACAACAAATTACCAGTCATCGGACTTTTTTTGGGTTTACTA
CTAAAAGATAAACAGTCGTGTACAGACTCTGAagctttcaaattattttt
gtctGCTTACATGAGCTGGATGGATAACACAACTTTGCACGAATCGAATC
TGAAAGAAATCGTCAACATCGCAAACGTCGTTTACCAGAGCAACACACCT
TCAAATGAAACATCTGCTAAATTTATCGCTTCCTGCAAGAAAATTGCCAA
CCCTGATCTACTTTGCATGACCCTGAACGAGCTATTCGCAGTCTTCAAAG
AGAAAAATGTTCCTGACCATTCTATCGTTTTGAAGTCCCTCTTAGATTCG
CTGTTAAATCTGATCACATTGCAGCCTCTGCGTAACGCGAAATCAATGTC
TGCcttgattttgttgatttttgaaaaaggaagaaCATTTGAAGACATCC
TATGTAAATTCATTGCAACCAAGTATGTCTCTAACTCAATGGAAACCCTT
GGCAACGTTCTCGCGGCTCTATGTACATCTGACAATAAGGAAACGTTAAG
ACCAAACAATAACTTTCAAGCAATCTTAGGACTCTATACACTTCTCTTAC
AAAATGGTGTAAAACCTGATTTAAAATCGTATTCCGCAACGCTGACTTTT
TTGTTCAACGATGAAAGCTGGTCACTGTCTCTACCTCTTTTACCAACGCT
GTTAGAAATTGACTTTAttaagaaagatttcaaaaactgTGCATTCAGTA
TCAGTCAAGTTCCCTCTGGTATCATAACTGACAACTTCAAGAAGCTTCTC
AAAACTGGAGTGGATTCATTGGAGCTGTTCCTCGTCCAAAACAAAACAGT
TAGTGATCCTGATTACAAAGTCATCTTGGGGTTTGTTCAAGTTTTATTCG
ATGATTTAACCAACTTTGGTGATATCGTACTACGTTTCATTTCCATTGCT
CAGCTGAAAATTAACGATTATTCAAACATGTCCGCTCCTTCATCCGTCCT
CAAACGATTGATTAACGACCTTAGACCGAAATACGTGGCTACAGAGATGT
ATGCAAAGCTTCTCCTCGTACGCGTTTCGAATTTGCAGCTCATTCAATCC
TTTGGTCAACCGAAATTAAGTTGGGTTCAACCTAATGCTATCTTAACTGG
TCACCCAACGGTTCAGCAATTCCTTCGAAGTCCGCGAGAGGATTTTGCTT
ATCGAAATTTCAATGGAATTGCTCATGCCAGAAACTGGGCAAGTAAGCAT
CAAGGATACCACCCTCAAAAAGGTTACAGTTTCAGAGCGTCTACTCACGG
TACGGGAAGAAATGCCACCGCTCAATTGAAAAAAGGGAGAGAATTTTACA
GTTTGAAGTTGAAAGCTTATCAAACTCTAATGACTGAATTGGAACAATTG
CAAACTAAATTGAAAGCTTTCCCGAACGTTTATTCGGAAATAGGTGACAA
AAGACCTGCGACTACCCCGTTATCAAATATTTCGAACATTCCGCCATCAA
AGAAAGTAGTCATTGAGATTGATTGAACAGTGTAAATACAATACGGCTTT
CTAAAACAGAACTGTATTCATTGTAGACACTATTGTTATTTCTTCTGATT
TACTTTTCTCAAACTAGCCACCATTTCTATCCAATCACTGGTCGACTACT
TTCGGGTACCCAATAAGCGTCCTCCCGCCatccaggacattcttattcta
acccccctccccccgcttattaagttttgagaattttccaaccaccccgt
ttattaggtacccaagagtaggCAAGAAATAGTTTGCTGCAAGGACGCCT
TTCTAATGAAGAATATTGTCTGCACGATATGATGGGCATTTAGAAATGCT
CGCTATAATGTTAATGATGATTCATTTTATTTCTTGTAGCTAGATTTGAG
ATTCTTTTTCTATGTCGAATTTTCGACCAATTTGAGTGAAAATCATTGAG
CTCTTTTTATTCTTACCTAGTTTGTATATGCTTGATGTATTGATGtacat
atttcttgagatattttCATTGGCATTTATTAACGCACTTCATTTAGCTG
TAAAGCAAAAGTTTATCGtttatattttttgtgaaaaacaacaaaaatga
taCAATTTCA

Run BLAST on NCBI

transcript from alignment at scaffold_209:21381..41370+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00052046 ID=TCONS_00052046|Name=TCONS_00052046|organism=Clytia hemisphaerica|type=transcript|length=19990bp|location=Sequence derived from alignment at scaffold_209:21381..41370+ (Clytia hemisphaerica)
TGATCGGCGGCGAACCGGCTCAGGACATAGGGTTGTAAATATCATTGCCA
CCGCAACGAGCGCAGCGAGTGAGGAGGCAGTTATAGCTTCAGGCGCAGTC
AGGCTTAAgggatattggactggaatctcgcaTTTTTGCGCGTTTTGttt
cgttttgttttgttttgttttgtcgcgcaagcctacccgtagttagtctc
ttccgtaaatgctcggttttttttccaggacggcagttgctagcctaaaa
accttttctttataatagcaggcgccgcgggcattttactcagctttcga
cagtagattctattccgcttgtagaatttgctgacagtcaaattacaatc
tgtctcctgtcCTAGACATTCAggagattgattcatttttcgacccaaac
agtttgtccccaataatgaacaatgattaaaatgaCAATAGTAGAACAAT
aatgattgaatatggacaaaagtgattattgttggtggttgaattggcaa
caaaattccactgtaactaaatttattcgaCAATCGTCATTCAACANNNN
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NNNNNNNNNNNNNNNNCTTCAGATATTtactctaaaacaaaatataaaaa
cagtttaaaaaaacagtaaaattcatacaagttaaaaacattcatTCCGT
AAAAACCTTTTCCACAATCAACAAAAACGTAATGCCTACAAGTAAGAGAA
atcaaaaattccaaatcatTAAAGCGaaacgaaaaaattaaaaagctatc
taagaataattaaatttttacgACCAGTGTCCGACTTTTATATTCATCTT
TAGTATTTAATTCAGGCTTGAGGTCTTTGATCAATAGTGCCTCAAGGGTC
ATTAAATGCTGttcattttttgatgacgttgcaATTATTGAGAAATTCTC
AATAGTAAGCTCTCTATTGCATTCCAGAAAGTGTTTTCCCACTGGGCTTC
TTTTATGTTCTTTGAAGCGTGTAGTTAAATGCCGGACGGTTTGTCCAACA
TAGCGCGAGTGACATCGCGGACACGAAATGAGGTAAACTACGTTGCTGCG
AAGGGGTTTGTCAATTTGAGGCTTCAGTGATGGTAAGATAGTTTTCAACT
TTCTGGTAGTGTACACAATTTTACAAGGAGCTTCTAGTCGTAAAAgcgaa
gtttcaaatttttctgaCCGTTTTCCGCGATATTGAAGAAAGAACTTTTC
CCGATCTGACTCATCCTTCTCCTTTTCGGGTTTAACTATTATTGAATTTA
AGACGTTTTTTAATGAGCGGTTCGAAAAATGTCTCAGGATACTGATTGTT
TAAAAGAATAAGTTTTGCTTTTTCCAAACTGTCATGAACAGCTCTCCATG
TACTACATGCTCTAAAGATGCGATGAATCATACCGGAGATGGCTGATCTT
TTGTATCTCATTGGCGACAAGGTNATGCGATGAATCATACCGGAGATGGC
TGATCTTTTGTATCTCATTGGCGCCAAGGCAAGAAAGTTCATCATCAAGC
CTGTATCCGTAGCTTTAGTATACCAAGTGGATGAGAGTTTGCACCCTTCA
CGGTGGATCAACATGTCGAGGAATGGAATGTTACCATTGTGTTCACGTTC
AACCGTAAATTTTAATGAAACATTCAAAGAGTTAATATTTTCGAGCCTTA
TGGGGGCACTGTTTTTCTCAATGTCCATAAGGATATCATCAACGTACCGT
TCATAGATGACTGCTTCCCCCTTGATTGTCTAGTCATATTTGCTAAGCCA
ACCGTTAGCCAGCATCGGAGCGGGCGGGCTACCCATTGCTAACCCATTcg
taatgggataaattttcgtggggattaaatttcgcggttgagctcatccg
cgaaattttaagatttcgcggggattaattttcgcggatgagggatttcc
tgatttttcgcggggatttaatttcgcggattggggtacaaattaaaatt
tttgaaaagggtcaaaacattgaaataaaatttttccaggaaaattaaga
atttttttttcaagagggtgttttggaatagggcgaggagatatgtatta
caattatcaaaagttgaatttgaacttccatggtgcCGAGCTAAATTTTC
ACAGCCTATTTGGAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNttcgcggattgcaaaaaaaattcaaatt
tttcgcggaaactaattttcgcggatgggcctttttcaaatttccaatgg
gacttattttcgcgtatgacacccaaatctgcgaaatccgcgaaaattaa
tccccgcgaaaatttatcccattaacgTGGGTGAGCATCAAAACGTCACA
ATTGCAATTTGAAGCATTTCTCTAAATGTTTCCTTATCTACAGGAGGTTT
CGCGTATCTACCTGAGTAAAGTATATCGGTACAATCATCGATGGCTTCAT
TAACAGGAACATTGGTATAAAGAGATACAATATCAAAGCTGACGATTTCA
TGACCATCGGGCAGATCGATTTCACTGAGACGAGAAGAAATGCTCTCAGA
CGATGTGTTGATGTTGTATTCTGGAACCACTGAAAGCCAATCCGCTGTCT
TTTTGGCAATCTTATAATATGCTGAACCAGGCATCGATAAAACTGGACGC
AAAGGAATATCGTTCTTGTGTACTTTAGCCAAACCATACAATCTTGGTGG
TTGGCTACCTGTCAATCTCAGTTTATTGTGTAGTTCGGTgttgattttct
tattttccaaCAGATCGTTCAGGAAATTCACCACTCTTTCCTCTTCtttc
aaaactgttttttttgcattctttcGTGGTGGTTCCCACTTTTTGAATTG
GGGTAGGCTGATAATGGCATCTAATTTAGAGTTATACTGTTCAACTTTCA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTACCTGAGTAAAGTATATCGGTACAATCATCGATGGCTTCATTAACAGG
AACATTGGTATAAAGAGATACAATATCAAAGCTGACGATTTTATGACCAT
CGGGCAGATCGATTTCACTGAGACGAGAAGAAATGCTCTCAGACGATGTG
TNTTTCATGACCATCGGGCAGATCGATTTCACTGAGACGAGAAGAAATGC
TCTCAGACGATGTGTTGATGTTGTATTCTGGAACCACTGAAAGCCAATCC
GCTGTCTTTTTGGCAATCTTATAATATGCTGAACCAGGCATCGATAAAAC
TGGACGCAAAGGAATATCGTTCTTGTGTACTTTAGCCAAACCATACAATC
TTGGTGGTTGGCTACCTGTCGATCTCAGTTTATTGTGTAGTTCGGCgttg
attttcttattttccaaCAGATCGTTCAGGAAATTCACCACTCTTTCCTC
TTCTTTCAAAACTGGGTTTTTTGCATTCTTTCGTGGTGGTTCCCACTTTT
TGAATTGGGGTAGGCTGATAATGGCATCTAATTTAGAGTTATACTGTTCA
ACTTTCATGATGCAGATACCTATTCCCTTATCGAATGGAATAGCCAGTAG
CCGATTGTCCTTCAAGTACTTTTTAGTAGCCTGTATGTTCCGActacttt
tttgctttttgcaaGTTTTGATGTAGttcaatgtttttatgtttatatcC
GTGATCAAATCGTCACTGACATCCCGATTCTTACAGAATTCGATAAAGCT
GTCTAACTCTGTCAACACGTcgttttgattcattttttcgAGAACTGCGT
TCTTTGGTCCAAGTGAAAGCGTTTCCATGACGAATTTTGGAGGGTCTTTC
TCCGTTGTAGCAAATGACAGTGTTTTTCACATTGAAAAGAGGGCATTCTT
GTTCAAGCGAAAGGTTTTGTAGTTTTTTACCATGTTTGGATTTAAGATTT
CGGCATTCTGTTTGCATTACGTATCGTAGGTGTAGAATAATCGAAGGTAT
ACATTCACGGGGTagattttgtttcaaatttgaaCGAATTGTAGCTACTT
TCTCACGCGTCGATGTATGATCTTTGTTAGCCTTGATCAATTCCTTTCTC
AAAAGTCTAATTTGAAATTCGTGAACTGATCGGTCATCAAAGCAGCCATT
TTCAGGAATACGAAATTTTAAAAACCGTGGAATAATATTTGCTTTAAGAC
AATTCTGTAGGAATTTAATACGAAGACTGTGGCTCTCTGCTTTACGTAAG
ATCTTGAGATACTTCAGGAACCATTTCCAACAGCCATTTCGTTGCAATTT
GTCTCTTAGCAATGTATAAGGTTCAAACATTGTGGCATCAATTTTTAGTA
AAATGTAAGTGACCAACAAGTATTTTTCTCATGATAGGATATGGATAAGA
CCAGTCTTTTTTGGCAGTTAGTACCCTAGAAGTACCATTTGATTGAGTTG
AAATTTATTTCACACCACCCTATACAGCAGTTAGTACCCACAAGGTACTA
ACtgcaaattccaaaaatgaaatatgacccaccacggtactaaccatCAT
GATGTCTGGTACCAaatgcatgacccccccccctgctggCACTGCAGTTT
AAAAGAGGTTTCCTGTTTCAAATTCTGCAGAAATTGCTTTTTCGGGCTGG
CAAAAGAAATGTACTTTGATCAATGTCTACTTTACAACCATCAGTTTCtg
tcataaaaatgaaaattatctgTACCNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNcgctacgcaagtttctgcgtagctagcc
cctgtatctataaggctggaacaccggattcttccagtcgtttatacaaa
ctaaatcccgtattatcattattattattattagtattggtattattagt
attacacgcattataaacgactccagtctagctCCCCTAGGTTCTAAATC
CGTCCCTTTCGACCCTCACTCACCCACTGGGTCTTATTTGAGAGGTTTGA
TCATCCCCTTAGATAGGCTCCAGTACAGGTAATTCTTAGAGGTAAGATTA
GATATGATTCTAAACGATGCTATCTTCTGTTATTGTCCGCTAAGGGGATA
GCAAAATGCGGGGAAATTTATTATGTGCGTAGCTTGCAGCCTAATTAGCG
TACACGGAAAGCACTAGCGGCGGTAgagaaataaaataatttaaatctta
aatttgaATCCTCAACCTTTCACTGGCTGGTAAAATTAAAGATTTGCGCC
GCGTTTTAAAGAATGACAAATTGAATCTATTACTTGATTTGTCATCGTAT
TTTACTTCTTCGTGAAagtaaattcccaaaatttcgcgatttttttgcCT
CGTGAAAGTTTCTTCCCTTAAATTAAGTTAAATTGAGTTATTTCGGATCT
CCATGCATTAATCTTCATAGGTCGAACGTGAACATGACAATGTCTACGGT
TGGTCATTAGAGCATCAATACAGCACAAGTTCCCTTGCAAATGGTATGGC
TGCTCTCAAGGGGAAAGATCGACAAATTGCAAGATCTTTATCCGCTGCAA
GTGAAGAAATGAACCCCAATGAACAGGTAATTGGAGTGTTTTTACTTTGT
TACAaaacttttgtattttattgaaaatgttcTCCTTTTTCGAGCTTACT
TGTCTGAAATAATCagttcgaaaaaatatttttttccttcgacagcacaa
aaaaaattctcaagacattttttttattcGGCCCAAGGTCGGTTGcaata
cttttgaaaaagtgctgatgactttttatgtttcataGACGTCTTTCTAT
TTGATGAAATTGGAACGTCATCTGAACGAATCTGGTGATCACTGCGGTGG
TGGTTATTATGGTCGCTCTGATTACAGTGATGGAGAATTCGAAGGTTGGT
ATACGAATATTGTCTTCACGTTTGGTTGATGAATCTAAAGATCTATACGA
CAAGAAGCTCTTTCCGCTGTATTCGCCAAGTAACACTTAGTAGCGCTAAT
GATTTATGAGGGTGCTGGCGAACTGATTATTTCAAGGAtatttctttttg
atgatgGTATCGCAATTACAAACGTCGGAGtactcttttgaaaaagtgtt
ttgaGGCGATAAATGTAACGTCAAAATAGGTTCAAAGATTATATAAAACG
GTTCGTCATCCAAAAACCTCAGAGCAACACCGTTACCGAATACTGCTTCT
AAATACTTCCCGACCCCTTTATAGAGAGAAATCGCAATGAGAACATCAAC
ATAAACCTAAGAGAGTGATTCTTACCAGCAATGTTGCAGTTAAACCAACA
TTTCATATTCTTACTCTGAATGTGATGGTGATTTCATTTGGCGTGTGAGA
GGAAGTCCCAGAACAGATACCTTAATGTAGATGTTTTTATACTCTTCCAT
ATCATAGAATTCTATATTACACAACAAGTAACAATGTTTACAACAAAGGA
TTTCTATCATATAAAAAGTCGTTATCTAGGGAATCTGTATTCATTTCTTG
GTGCCTAGGGAATTTTCTATGCAGGACGATTCTTACTTTGATTTCGTTAA
TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AATGTCtttcttgttacccgttgtcacccgttgttacccttgtcacactt
tttacaaaactttcgaaaaagtcaaaaaatattctaagtccaaatttaat
ttgagtcttgttacccgttgtcacccgttgtcacccgttgttacccttgt
cacactttttacaaaactttcgaaaaagtcaaaatatattctaagtccaa
ttttgagtcttgtcacccgttgtcacctgttgtcacccgttgttaccctt
gtcacactttttacaaaactttcaaaaaagttgaaaaatattttaagtcc
aaatttgagtcttgttacccgttgtcacccgttgtcacccgttgttaccc
ttgtcacactttttacaaaactttcgaaaaagtcNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgttgtcacccgttgtca
cccgttgttacccttgtcacactttttacaaaactttcaaaaaagttgaa
aaatattctaagtccaaatttaattgagtcttgttacccgttgtcccccg
ttgtcacccgttgttacccttgtcacactttttacaaaacgggtgagaac
gggtaacaagactcaaatttagacttagaatatttttcgactttttcgaa
agttttgtaaaaagtgtgacaagggtaacaacgggtgacaacgggtgaca
acgggtaacaagactcaaatttggacttagaataattgtcaacttttttg
aaagttttgtaaaaagtgtgacaagggtaacaacgggtgacaacgggtga
caagactcaaattttgacttagaatatttttcaacttttttgaaagtttt
gtaaaaagtgtgacaagggtaacaacgggtgacaacaggtgacaacgggt
aacaagattcaaatttagacttagaatatttttcaacttttttgaaagtt
ttgtaaaaagtgtgacaagggtaacaacgggtgacaacaggtgacaacgg
gtaacaagattcaaatttagacttagaatatttttcaactttttcgaaag
ttttgtaaaaagtgtgacaagggtaataacgggtgacaacggttgacaac
gggtgacaagactcaaatttagacttagaatattttttgactttttcgaa
agttttgtaaaaagtgtgacaagggtaataacgggtgacaacggttgaca
acgggtgacaagactcaaatttagacttagaatattttttgactttttcg
aaagttttgtaaaaagtgtgacaagggtgacaacgggtgacaacgggtaa
caagtctcaaatttggacttagaatatttttcaacttttaaaaatattgt
aacaacaggtaataacgagtaacaacgggtaacaacgagtaacaagagac
ACTTTCGGTTATTATATTATGATCATTTGCAGGAaatcataataaattat
acgaTATCAATTAACTACAAATCGTGTCTTCTGTATAACATTAAGTTTAA
CATAATCGTAATACATTTCTTCTAATTAATGTTTAAAGGAATAAGGGTTC
AAATCATTTCATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCATTGCGCTCGCGAACTACTTCAC
TAAACGCGAAGTGAACACTCCTCGTTCATatgccttaagggaagaaattt
tcgcgagaagaaatttttgcggaagaacttttcgcggaatttaatttctt
cccttaaggtaatcttcgcttgataaaaacaaacaaaaactttgtcaacc
aaaagctgtcaatatctagcctcagtagcagcgacgatgagctgccaaca
aaccattagtttttttttaattgtaaaatagcgttgacttttattagcct
tttcgtcaacatgaaataaactattacatacaaTTATCTCCCCCTCCTCC
TCCTCTCGCACACTACAGAATATGATTCATTTCatgtaaacaaagaaaat
ttcctCAAAACAATAATTATTCATAGAATTCAATTACTTTAATACATACG
GTGAAAACATAATAAAACCAACGCTTGTGTATTTCTttgagaaagagaaa
aactccCAATGTCAAAGCAACAGCACGGGAAAATGAACATTTCCCTCCGA
CAAACGGGGAAACTCTAGCATAACAATGCGAAACGCACCGCTAAAAACTG
ATACTTgaatttttattgcttttctTTTTAGCATGCGAAATTATGGACGA
TGAAACAGAAATTAAAGAAGTGTACGACTTTGAAGGCGAGGAGCATGATC
TTAAGCATGTTTGTTTTGACATCGAAGAAGATCTTCTCGATTTCGAGGAG
AAATATGACGGCGATATCGAATCGTTTTGGGGCGAGCATGACAGTGAAGA
AGTCGAAGGACCAACAGGAAATGAAGGTACAGCTTATTTTAACCTTTAAT
AAACGAAATCTATTTGAATACTTCCTACTTTATTGTCATGGACACCTGCA
GACCTCGTCGATTGGCACGCCATTTGTTATCCTTCTATAAAATACCAACC
TGGCAGGTGGCTGAACGAAAACCTGGCAAATCACCTTGTTGGACCTTTCT
GAAGTCCTATAAATAAATTAACCgacgtttgttcgttcgttcgttaccag
cttttctctaGATTGGTTcattcagatttttttgcacaaaggtgcgttac
cctcgaatgtgacggagcccgattttcgagaaaaaaaattgggtaaattt
cagccaaaGAATGGCTAGTTGAAAccagttgaaaatatttatgtAATTTC
ATCTCGTCTTTTTAGGTTCGTCGCGTGATCGCTGGTATTCAAGTTATATC
ATTCTCGCCATTCCTGAaagtcaaaaattcaaattgctCTGTCAGAGTGG
AATAAAGGAAAGCCTTCAACATCTGTCTGGAGAATTTGAATCATCTTCAC
CAAAGTTCAAAGATCATTTCCGTACATTTTTGACAAAGTTCAAAGCTTCT
GCTTACAAGGATGAAAAGTCCTATTCCAGACAGCCCCAAAATATCGTCAA
TAAGCAACCGCCTGGTCGAAAAAGTATGACGAAAGTCATGTCAATGCTGG
AGAAGACACGAGACCCTGACCTTACCAATTTGTTCGTCAAGAACGTTCTT
AATGGAAGTAAATCTTCATATGCATATCGTGGTGATGGCGAAATCTTCAG
CATCTATTACGAGAACATCGAGAAACCTGTAGCCGATTTGCTGAAATCAG
TATCGTGGGAATCCATTAAAGAGGAAGTTGAATCTGTCATCGTTGCGTCT
CCAATTAACCATTATCTCCGATGGGCGAAAGCTTACAACCATAATGGCAT
CACAGAAATCGCGCACAAAATCATAGAGCAGTGTCTACAAAAGGTGGAAA
AACTAACCGGAGAAGAGTTCTACCCTTTATGGGGAGAAATCTTTTCACTG
ATCTTCAACAATGAATTGTTTGGCACACGATGGTGGGATTCAATCATGAC
TTGCACTCAAATTATCTCCAACCTTCCACTTCTTTCCCACTTGTGCTCTC
GTTTGTCTCCTGAAAACCAGACAAAGTTTCCGCGCCTCTTTGACGGATTA
ATCGACCTCATGAAACAACCAACTACATCGCATTCTAACGATactcttgc
atcaaatttgTTCTCGGCTATAAAACAAATTATTGAAGACTTATTCTATA
TAAGAAAACTTCAAGAGCTTTGCGACGCCCTCGTTGCAAACAACAAATTA
CCAGTCATCGGACTTTTTTTGGGTTTACTACTAAAAGATAAACAGTCGTG
TACAGACTCTGAagctttcaaattatttttgtctGCTTACATGAGCTGGA
TGGATAACACAACTTTGCACGAATCGAATCTGAAAGAAATCGTCAACATC
GCAAACGTCGTTTACCAGAGCAACACACCTTCAAATGAAACATCTGCTAA
ATTTATCGCTTCCTGCAAGAAAATTGCCAACCCTGATCTACTTTGCATGA
CCCTGAACGAGCTATTCGCAGTCTTCAAAGAGAAAAATGTTCCTGACCAT
TCTATCGTTTTGAAGTCCCTCTTAGATTCGCTGTTAAATCTGATCACATT
GCAGCCTCTGCGTAACGCGAAATCAATGTCTGCcttgattttgttgattt
ttgaaaaaggaagaaCATTTGAAGACATCCTATGTAAATTCATTGCAACC
AAGTATGTCTCTAACTCAATGGAAACCCTTGGCAACGTTCTCGCGGCTCT
ATGTACATCTGACAATAAGGAAACGTTAAGACCAAACAATAACTTTCAAG
CAATCTTAGGACTCTATACACTTCTCTTACAAAATGGTGTAAAACCTGAT
TTAAAATCGTATTCCGCAACGCTGACTTTTTTGTTCAACGATGAAAGCTG
GTCACTGTCTCTACCTCTTTTACCAACGCTGTTAGAAATTGACTTTAtta
agaaagatttcaaaaactgTGCATTCAGTATCAGTCAAGTTCCCTCTGGT
ATCATAACTGACAACTTCAAGAAGCTTCTCAAAACTGGAGTGGATTCATT
GGAGCTGTTCCTCGTCCAAAACAAAACAGTTAGTGATCCTGATTACAAAG
TCATCTTGGGGTTTGTTCAAGTTTTATTCGATGATTTAACCAACTTTGGT
GATATCGTACTACGTTTCATTTCCATTGCTCAGCTGAAAATTAACGATTA
TTCAAACATGTCCGCTCCTTCATCCGTCCTCAAACGATTGATTAACGACC
TTAGACCGAAATACGTGGCTACAGAGATGTATGCAAAGCTTCTCCTCGTA
CGCGTTTCGAATTTGCAGCTCATTCAATCCTTTGGTCAACCGAAATTAAG
TTGGGTTCAACCTAATGCTATCTTAACTGGTCACCCAACGGTTCAGCAAT
TCCTTCGAAGTCCGCGAGAGGATTTTGCTTATCGAAATTTCAATGGAATT
GCTCATGCCAGAAACTGGGCAAGTAAGCATCAAGGATACCACCCTCAAAA
AGGTTACAGTTTCAGAGCGTCTACTCACGGTACGGGAAGAAATGCCACCG
CTCAATTGAAAAAAGGGAGAGAATTTTACAGTTTGAAGTTGAAAGCTTAT
CAAACTCTAATGACTGAATTGGAACAATTGCAAACTAAATTGAAAGCTTT
CCCGAACGTTTATTCGGAAATAGGTGACAAAAGACCTGCGACTACCCCGT
TATCAAATATTTCGAACATTCCGCCATCAAAGAAAGTAGTCATTGAGATT
GATTGAACAGTGTAAATACAATACGGCTTTCTAAAACAGAACTGTATTCA
TTGTAGACACTATTGTTATTTCTTCTGATTTACTTTTCTCAAACTAGCCA
CCATTTCTATCCAATCACTGGTCGACTACTTTCGGGTACCCAATAAGCGT
CCTCCCGCCatccaggacattcttattctaacccccctccccccgcttat
taagttttgagaattttccaaccaccccgtttattaggtacccaagagta
ggCAAGAAATAGTTTGCTGCAAGGACGCCTTTCTAATGAAGAATATTGTC
TGCACGATATGATGGGCATTTAGAAATGCTCGCTATAATGTTAATGATGA
TTCATTTTATTTCTTGTAGCTAGATTTGAGATTCTTTTTCTATGTCGAAT
TTTCGACCAATTTGAGTGAAAATCATTGAGCTCTTTTTATTCTTACCTAG
TTTGTATATGCTTGATGTATTGATGtacatatttcttgagatattttCAT
TGGCATTTATTAACGCACTTCATTTAGCTGTAAAGCAAAAGTTTATCGtt
tatattttttgtgaaaaacaacaaaaatgataCAATTTCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_032959	XLOC_032959	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00052046-exon-scaffold_209-1491911889:21381..21414	TCONS_00052046-exon-scaffold_209-1491911889:21381..21414	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1510915933:21381..21414	TCONS_00052046-exon-scaffold_209-1510915933:21381..21414	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1575043694:21381..21414	TCONS_00052046-exon-scaffold_209-1575043694:21381..21414	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1491911889:30101..30256	TCONS_00052046-exon-scaffold_209-1491911889:30101..30256	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1510915933:30101..30256	TCONS_00052046-exon-scaffold_209-1510915933:30101..30256	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1575043694:30101..30256	TCONS_00052046-exon-scaffold_209-1575043694:30101..30256	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1491911889:37762..37956	TCONS_00052046-exon-scaffold_209-1491911889:37762..37956	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1510915933:37762..37956	TCONS_00052046-exon-scaffold_209-1510915933:37762..37956	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1575043694:37762..37956	TCONS_00052046-exon-scaffold_209-1575043694:37762..37956	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1491911889:38346..41370	TCONS_00052046-exon-scaffold_209-1491911889:38346..41370	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1510915933:38346..41370	TCONS_00052046-exon-scaffold_209-1510915933:38346..41370	Clytia hemisphaerica	exon
TCONS_00052046-exon-scaffold_209-1575043694:38346..41370	TCONS_00052046-exon-scaffold_209-1575043694:38346..41370	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_209	supercontig	scaffold_209:21381..41370 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.463225	0.0539659	6.3111e-08	0.00164066	0	0	1.40453e-07	0.0200703	0	0	0	0	0	0	3.86867e-09	0	5.01708e-09	0.0119385	0	0.00192259	1.6298e-05	0	0.455989	0.324412	0	0	0	0.538378	0.0224824	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00052046 vs. Swiss-Prot (Human)

BLAST of TCONS_00052046 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00052046 (transcript) - C. hemisphaerica