TCONS_00052272 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052272
Unique NameTCONS_00052272
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1931

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052272 ID=TCONS_00052272|Name=TCONS_00052272|organism=Clytia hemisphaerica|type=transcript|length=1931bp
CTACATTTAACCGTGCGATCAAGTCTTTGTATATAATGGCGCTAAAATCT
CAATTCATTTCAAACCGATTTTCATTGGTAGTTTTCTTTTTGTTGGTAAA
TAAACAATGTCAGACTCTTGGATCACGGTATTATAATAACGGCGTTACTA
CCGATTACGATAACAATGACGGCGATGAAACCTTTGTCGAGGAGCCCAAC
CAATTTTCTCCAAGTGCTAGCCTACTAGATTCGAACACTTGGTATCAACT
AATGTACCAATCACTTAAAATTGATCGTGGAAGTAAATTCCTTGGTTGTC
GCTTACAAAATCGTTAcattaaatattttaataattcTGTGGATCAAGAG
CAATACTGTGGTTACATTCCGGCGTGTAAAAAACCGATCATTGTTCGATA
TACAGAGACGAAACCTTTAATATACTCCGAAATGAAGGGGACAGAAAAAA
TCATGAAAGGGCTGTTAATAGATATTCTAGAGGAGGTCCTTGTCCAACGT
TGTTGTCTTGGATGTACAAATTTACAATTCGTCCATTATACCATTCCTGA
TGACATGTTCTTTGAGAATTTCAATGCATGGGAAAATGATAGCATTATTG
CGCCTGTGGAATTTCGTGGAGAAGAGAGCTCTCTCTTAGGTCATCATCTT
GTACCACTCTTCCAGCATCGAAAAGTTTATTTTCTAGGGCTTCATACTGA
GATCGATTCTTACGTCTTGTTAAGAGGAGTTATCAATAATGCTTTGTTAA
CTTGGCCTCTGTTCGTTACTGCACTTTCAATGGCTGTTTTGGCCGGTGTC
ATCATCTGGATCTCGGAACAATGGAGTAATGAAGAACATTTCCAGAAAGA
ATTCCCAAGAGGAGCCTTCGAAGGATTTTGGTGGGCTTATGTTTCCATGA
CGACTGTTGGATACGGTGACAAGACACCATCGACAGTATTTGGCCGTTTG
TTTGCTATTCTCTGGATTTTAATCGGCATCACCCTATTCAACATGTTCAC
GGCTGCTATTATCACTGGGTTAAATGCTGCAATCCGACAACATTCCACTT
TTGAATTGAGTGGCTCCAAGGTTGGTTTTATTGAAAGTAAACCTCACGTC
TATAACAGCATCATGAAGGAATTTGCTTTTCCGAAAGTGTACTTCAACAC
AACACAGTTGATGGAGGCTCTTGATAATGATGAAGTACAAGCCATAGCAT
TGGATGAGTACGCATATTTTCATGCTCTGCCGGCTTTCAAAAATCACGGG
AAAATTGAAATCAAGCACATTGCAAAACTTTTCGATTATCATGTTGGATT
TGGTGTTATGGTGAAAACAAATCCTTATTTTCAGATGCaaaaagaattta
atgaattcaGTCAAGAAGACTTGGCTTTTTCACAGaGATTGGTTCAATCA
CGATCAAGCAAGCAGAGCACAGAAGAAGCTTCAACAATCAGCATTATTTT
CGATGCGCAAAAACAACCTTTCTGGTTGACGATGGTGTCCACGTGTGTTG
GCTCCATGTGTATGGTTTTGCTTTGGTTTTTATTCCGAAAATGTTGTGAA
CTAAAAAACAAATCTAAAGTTGAAGCAAGTGAAACCAGGGAAGTTGAAAA
ATCACCCGGAATTAAAATTGAAGTCGGAGAGAAGATCCATGtgaggtgaa
agaaaaatatactGGTCGCGGCCTCATAAATGAGCTGGTTGTTACAGATC
AACACAATTTGGCTTCTTACACAAAATCAAATGCCTCAGAGAGAAACAAT
GGACGGAAACTCAAAAATGAATGGATGGTTGAATCGATCCATGAACCTTA
GAAATCACTTGCTATCAAAGTCGAAGTTTTCGCTTataaaagtccaccct
tacagtgggaaaaattgcaaatttttgcccgaaaattttgatgtttttgc
tctaaaagagtttaaaatttgaaaaaatgca
Run BLAST on NCBI

transcript from alignment at scaffold_213:848368..864550+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052272 ID=TCONS_00052272|Name=TCONS_00052272|organism=Clytia hemisphaerica|type=transcript|length=16183bp|location=Sequence derived from alignment at scaffold_213:848368..864550+ (Clytia hemisphaerica)
CTACATTTAACCGTGCGATCAAGTCTTTGTATATAATGGCGCTAAAATCT
CAATTCATTTCAAACCGATTTTCATTGGTAGTTTTCTTTTTGTTGGTAAA
TAAACAATGTCAGACTCTTGGATCACGGTATTATAATAACGGCGTTACTA
CCGATTACGATAACAATGACGGCGATGAAACCTTTGTCGAGGAGCCCAAC
CAATTTTCTCCAAGTGCTAGCCTACTAGATTCGAACACTTGGTATCAACT
AATGTACCAATCACTTAAAATTGATCGTGGAAGTAAATTCCTTGGTTGTC
GCTTACAAAATCGTTAcattaaatattttaataattcTGTGGATCAAGAG
CAATACTGTGGTTACATTCCGGCGTGTAAAAAACCGATCATTGTTCGATA
TACAGAGACGAAACCTTTAATATACTCCGAAATGAAGGGGACAGAAAAAA
TCATGAAAGGGCTGTTAATAGGTAAACTTTTACACTTTTTCCCCATTATG
CCACAAGCAGACCCGGCGGAACTGGGGAGAGTGGGGAGACTGGGAATTTT
ATCTCGTTTTGACCCTTCAGCCTCCCCCACtttaacggttgttccgccga
GTCTGACAAGCCAGTTGTCCCTGTGGTAACCTTTCTGATACCTCTAGCTT
AAAAATCCTAAAAGACTAAAGGCCGCTATgcttttaaagtttgtatgtAT
CTAAATCAATTAAGTGAGCTTTTACCCTTTTATTCTACATCACGTgctac
ccagctgacacacgacgttgttttaacgttcatgtaatgttcataacgtc
catataagaacaaatcatataaaaatataaggcttctatgaccaaaatat
taagaacaagttaaaaacattcaagGTTTTATGGactaaaatactcacaa
aatggtgaaaataaggcttaaaatacaaaaagatttcaaaaatttctaat
GATAAAAAGAGTGTGTACTCCTTGTGAGAAATATTTACCAAGTCTGCAAG
TTCCTTTTTCaaatgtgttttattatatcaTGCAAAACCATTCATGTTTT
AGATATTCTAGAGGAGGTCCTTGTCCAACGTTGTTGTCTTGGATGTACAA
ATTTACAATTCGTCCATTATACCATTCCTGATGACATGTTCTTTGAGAAT
TTCAATGCATGGGAAAATGATAGCATTATTGCGCCTGTGGAATTTCGTGG
AGAAGAGAGCTCTCTCTTAGGTCATCATCTTGTACCACTCTTCCAGCATC
GAAAAGTTTATTTTCTAGGGCTTCATACTGAGATCGATTCTTACGTCTTG
TTAAGAGGAGTTATCAATAATGCTTTGTTAACTTGGCCTCTGTTCGTTAC
TGCACTTTCAATGGCTGTTTTGGCCGGTGTCATCATCTGGATCTCGGTAT
GTTCCAATATGCTAATTGGTAAATACACCcgcttctcacagacccactgg
gaacccttcccactggaaacattttcaaaaatatatccCCGGTGGTAAAT
TATCCAGCCATAAGAAATATGGGAATACCAATCCTTATCGAGTATTGGTC
CGTTATTCTTACCTACACCGGCTGATAAAATCCTACCAGGTCCATGAGAA
GGGGGTGCCTGATTGGGAAATTCAAAAGGGTAAGTCAGTCAAGGTTTAAA
AACCCTTGGTGGTGGTATTAGGGCAAAAATATATGCAGGGATTTCTGCTG
GATAGAGCACTTTTTTACCTGAACAAGCTGATAGGGTCGATCCAATACAC
ATATTTTTCAATAGGACTTTCTAAATAAtgcttttgtaaattttgacatC
TTAACTTCTACAAAATATTAAAGTTGTCAGATTCCCCATTGGTAATCAAT
TCtgtattcatagaattatagtTCACAAGTATCGAGCTCTATGAAGTAAT
ATGAAATATATAATATATCTAATCCTCGTCCGTCACCTAGTCGTCAGAGG
ACAGACTGGGCATTGGATAAGTCTTCAAAACGAATATCGCGGCTTTGTTA
GATTCGTCAAATCTTGGTCAAGCGCTCTACAGAGTGTAAGAAAATGTTGC
TATTTCTAGGAACAATGGAGTAATGAAGAACATTTCCAGAAAGAATTCCC
AAGAGGAGCCTTCGAAGGATTTTGGTGGGCTTATGTTTCCATGACGACTG
TTGGGTGAGAGTTTAATTCGTTCTGCACATCgatgtttgaaaataaatta
tcaTCCCAGACTCGACTCAGAAAATTTTCAGATCTTGAAAACTTGAGAAG
CCAAATAGGGACCAAAAGTACATTCGAAATTTCCACTCTTTCACAAAATT
ATTTGCTCTCGAAGACggtttttatatattatttttcttttccaagaTAC
GGTGACAAGACACCATCAACAGTATTTGGTCGTTTGTTTGCCATAGTCTG
GATTTTAATCGGCATCACCTTATTCAATATGTTTACGGCTGCTATTGTTA
CAAGTCTCAATAATGCAATCGCGAAACACTCCAAAGTCGAAATTGTTGGG
AAGAATGTAAGGAAGGGGGTTACATCAGGGCGTaacatgaaaagaaaatc
catcgACTCTGTAgactatagtctaagacaaatcactatctaagaaataa
gcccaaagccgaagaaaattcgcaaacaggCTTTTTTTATCcttcagagg
ttaagttttcaaagaatatattaacctctgaagaccaataatagaaattt
tatcgcgcatgtgtcaatctaatcactgtagaaaaaatcaaagatNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Nagcaaatattaccatattaatgtctagcagactgtatcagtatgcagtt
tactatttacgaattctccagaaacctccaagtgtaattgaaatgagttt
attttgaaggaaatcttttacatgatccccaaatgtataacagtaattac
taaacttttaattatggaaatgtccctttaattgaatcgaaatagtAGAC
Atattttatgttatgattctctatcactgactctttttacaaagcattgc
tgacttttttaagttgtgttttcaacgacgggaataaaaatatcaacgct
gaacttcatccaagatcttggatggtcgtcatggttacttttgtcttcgt
taattgcgcgctgaatagaatctcgattcattggcacagcgtcaatatat
gattttgacctgtgctattcacggtaggcttttttgccaaaaagagttta
cagccggtagAGTTTTCCAGTCTTTGAAACTCTCCCGccaatttttttcc
gtataccgccataacgctaTACCACCATATCTTCCCgctcactgtaacgg
acgataacatacCACTCTGTCAAGGTCCTGATGAGTTCAATCTCCGATCA
AATCATACCAAAGACTTCACACTCAAAAGAAGTAGTGTTCTCCCCTTCAT
TCAGGTAGGCAGCAAAACAAAATTCTTCTTCGGATTGCTCTCGGCTTCGG
TcgcatcatcatcatcatctcgACCGCAGTCGAGTTCTGATACTTCcttc
ataacataaagtctgtctattatttcgattcaattaaagtgatatttcca
taattaaaagtttagtaattactgttatacatttggggatcatgtaaaag
atttctttcgaaagaaacccatacttcaattacactttgaggtttctggg
gaattcataaatagtaaactgcatactgatacagtctgctagacattaat
aaggtaatatttgctcttcatctttgattctttcaacagtgattagattg
acacatgcgcgataaaatttctattattggtcttcagaggttaatatatt
ctttgaaaacttaacctctgatactcagggtatgtATCAGTGAGATAAGT
TGCTGGACTACGAGGCCCAAGTATATATTCAAGAAGAAAACCACAATGTG
AGATTTTGTCAACAGAAATGTGCATGATGtaatctgcaacaaaaataaaa
agaagaagaaacggGGCAAGGGTATCACTTTGCAAGATACCTGTTAAGAT
GGGAAAGTATCAGTCTCGCCATCTGTAGTTTGGACAGAAGAGTTGGTGTC
TGTATAAAGAAGCTTGATGGCATTATTGATTTTCGTGGGAATGCCATATA
GTGAGAGGATATCAAACATTTTATCTCGATCAACTGAATCGAaagctttt
ttaaagtcaacaaaTACAAGTATAGCATCGAGATTAAAATTCCTGGCTTC
TTCAAGTACGCGACGAAGGGATAGGATTTGTGTTAGTGTGGAGCgcccct
acgaaaaccattttgatttttacgaaGAATGGGTTCCACTTTAGACCGAA
TCCTATTAAGTAAAAGTTTGTTGTGCATCTTAGCCGCTATTGGAAGAAAA
GATATACCACGATAGTTAGTAGCAAGAGTTAGATCTCCCTTTTCGGAACA
GGAATGATATAAGGCTTCAGCCAATGATTTGTGCAAACATTTTCTTCGAA
TGCGATATTACAAAGATTAAGAAGGAAACCGTGGAAGTTCTAATCTTTCC
AGATAATAGGTGGAATGTTATTTGGACCGAAAACTTTACAAGATTTAGTT
TGGGAAAGGACCTAATTAAAGTGAAAGGAGAAAGAGGAATGTCCAAATGT
GGAGATATTTGTTCCCTAGGTAAAGAATTATTTTCAGAGAGAATTGGCTT
TTTGCCAAGAAGGTTTTTAAAATGGTCGGTTGCAGACTTACTTTATTACT
CGCAGTAACCTTTTCGCCGGATTTTACTAAGATGGTGGACAGGTGGCCAG
TTTATAGCCATTTCTCACTTTTACGGTTCACTAgatgaaatatattttca
taattCTTCAGGTTGGTTACATGGAATCCAAGCTTCATGTTTATAACACA
ATCATCAAGGAATTTGCTACACCATCTACAGGTAATAACTAATAGGGGCT
AAGCCAAAATGtgcttcttttttgaaaaaaaatgctaTGCCTATGAGTTA
GTATGAAAATAGAGTAGGACTTTTggttacacacttttttttataagaga
atggtgtaaatccattccatcatggatattcttaatatttttgggAAAAG
CATCCTAGAATATTCTTaccacattcttaggttaggattctaattcagac
tagatttaacatttagtacatacgtctcaagcataaaatggcatttttgt
gaaaggaaaAAGCCTTACTTGATAATTgttaattgacaatttataattga
aaatgctctaaagaTGGCATTCTTAGCCattagtagcaaaattccatgat
ggtgatattcttggcattattcttaattttttggccattttcatcttgga
tattcttataaagtgtattcttataaaaaaacatgtatcccTCATCTGTA
TAACTCGATAGTTATACAGCCGATAGTATGGCTtcacttttctttgtttt
caacttGGTAACATTTGccagacttgaaattttgcgtcCAAAAAGACTAT
ACTACAGGTACCCACTAAAGGGTAAACGAAATCAAAACACGCTAAAAGTT
GGATATTGGACATTAAATTTTTTAGTTTACAAAAACATGTCACAGATGAT
CAATGCTCTCGATAATGAAGAAATTGATGGTAAGACAGTTCTTTAAAAAC
AGTCCCATCTTGATCGAGATCCGCGGGGGAAAATGGCCGATCTTTGACAT
TTTGTTTTGtaatataaaatttattttggcttttatGGAAGAGCCAAGTT
TTCAATTTCCAATGTGTCAATATTACTAAAATAAAGATCCTTCCGGCATT
TCCTGTTTTTTGCAAATACTAAGCATTTAAAAAGGTTCTGGAAACAACAC
AACAAGTCTATCAATAATAAACCAAAGATTTCCTAGTCTAGCCTCTGTCA
TCCAGTTAGATCCAAATCACTGGACTCCCTAGTTGAAAATAATTCCAAGG
AAGGTCATTATTTCCACTAACTAATCAATTGTGATCAATTGATGCAATTT
AACAGGGGGTCCAAGTAATTTAGGATAAGGATATGGTGTCGGGCTGAGTC
ATTTATCAAAATCCATaccaatatttttattttcatttagttATTGCAAT
GGATGCATTAGCTTACAATTATGCATTGAACATGATCGAAAAAGCAACAA
GAACAATCCAAGTTGTATATATTTCTTCTTTGGAGGATTACCATGTAGGC
TTTGGtgtactttccaaaaaaaacccTTACTATAAAATGCAGAAGGAGTT
TAATAAATATAACCAAGAGGACCTACCATTGTCTAAGGTATGATGAATTC
tgacaacctcgtccccgtgtatcccagactttatttacgttactgattga
cgtcAAAGAATATCCTAGTGTAGGCTGTTGCTAGTATTATCTAGCCCTAT
TCGTAAGCATcgaaaagctgataatacgcaggggaCGAGGTTGGAATTCT
TAATGAATATAATatgatataccttatcggggaaaactttgtcggtgaaa
attttcgtcggggaaaaaaattagtcacttgctggtagttggtaaacgca
ttaaggccggggaaaattttcgtcggggaaaaatattcgtcacttggccg
aaatttcgtcacttttccccgacgaagttttccccgataaggtacgtTAT
TAACAAACAAATTCTATGATGGCGACATTGAGTCATAAATTTTTGTGACC
AAAATTTATTAGGCTTTTCTTAAATTATTTCAGGGGGAATAATGATGTCA
AACCCCCGAATTATTTTATGAAAGCATTTCTAATTGATATTCCAGGAGcg
acttttcaaattcaagaaaaacttttggaaacattatgaacaataaatat
ttatttcttcattttcttagaaatttttGACAACAGATTCCAAATCAACC
ACAGTCATCACCAAATCTTTTGTGGGTGTAATGTTTGATGCCAGAAAGGA
ACCCTTTTGGTTGACTATCACAATCACGCTAGTTGGATCCTTGCTGTTAG
CTCTTATTTGTCAATTCATCAAATGGTGTTTAGCTAATGAGAAGCGTAAA
GTTGTGCCTTGAACTGCAATTATGCAGTTAAGTTGAAACTATATCTGTAA
TTTAATACTACTATTTACTATCTTGTGGGATTACCGGAGCCATTTACCAT
AACGCAAAAGACTGCTAACGTTCTATTTTAAAGACCAGTATCACTTTGAT
TCCAGGATATTGCGAATAAACATTTCTGACTATTTCAAACACAGATATTG
GCATTATAAAGACAATTTATCACAGTACTTAACGATGGCCCCCGGGGGTG
TTAAGTTTGCGAGGCCACCGgaatgtccgagccaaaaatcgaaaatcaac
ccttagagagaggaaaaattggcatttttggagagacatttctcaaaatt
tttatcgatttcacccgatttttgtccaaattttggaaaatcacgaccct
ttgagagaggaaatttttagacccttacagagactcaattttctttttaa
tgttttttcacCCCTTTGAGAGACGTTCGAGGGTGTCAAAAaggctcgca
catacccagccttcattttgcctaagtaccccaccCCCGAACGATGATCT
CAATGAATGGGGCTCTGATTGCTTATCGATGTAGTAAACACGACAATTTT
CTCTTTAGTCCATACATTTATGGTTCATATGGTTATATTTTGTACTGATT
CCTGAGAAAGGTAATCTAAAAGATTATCCCTATTTGGATAGTGAGAAGAA
TTCCAATTAAGAATTATTAagaattaaatgaaaaatattggcaTTAAAGG
TTTTGTCTTTGCATAAGTGtttctgtttcatatcagacacatgtttttta
tcagaacagtgccttgctattgttatattgtgctgatataaacaaaaaaa
tgttttgattttcctctttctgatcatattgctccacatccgtgtcaatt
caatgtgaaaaagcttgtaaattaaaattgatgagtaagcaaacgatatc
actcttattaaaaaaaaaacatttaagacatgcacaattttttttaatag
tttttcaagaaaaatgagGATGGTGAGATTTTATAGTGTACCGTACCGAG
TACCGATAGCGGTAAAAAAACACTATTGAATGGGGCAGTTTAAGTTTTTT
ATGCCCCAATTTTAAGGACTAAATTTTTCACTCGAAATAACAAATATTAA
TTATTTAAAATTCCATTTTCAATATTATCCGATTGAATTTCAAAGCAGTG
CTCGagaattattttaaaacttttcagtgataaatattgaaaataaaaaa
attcctaGTGATTTCTATTCAACTTGTTTTCTGTTTGTTATTCCGATAGT
AAATTTCGAATCAAATAGCTCATTCAATCAATAGCGATTATTTTTCACAG
ACCACATAACATGGTCCGCAAAtagccgaagaaaattttcatattggatC
CATGCTTTGAAGGTAAAAGTTCACTTTGAAGAAAGCTGTGATTTCACGCA
AaggatttcaaaagaaaaaatttaatgatgaaaaatttgaaatcctgATC
TACGGACGAGATGTGAAAGAATTACACTTACTTATGTAATGTTGAGAATT
AGCATAAAGGTGCATCCTGCAATTGTATTTTTGTATTGTGTTATCTTGAT
AATTCCTTTATCATTGTCTAACGCTGAAATTATTGGAGATGAGGGTGAAA
ATTTTGACAATGAGGGCGCTGAGGGCAAAGATGATGatatcaaacattca
agcacaTTATCAACTTCTGAACTAGCTGGAAATCTCACCATAGACGATTG
GTTTGGTTTCTTTTTGGGGAATACTTCATTTGATGATGCTCCATATGTGA
CATGTCGTTTACAGCAAAacctcatcaaaaaattcaaacaaagtgTCGCC
GGTGATCAAACGATTTGTCAAATAGTTAAAAATTGCCAGTACAATATCAc
agttttttattctaattcACCTCCCTTGATTTATGAGGCTTTTGACAAGA
CACGGAACAAAGTGGTGAAGGGGATCTTAAAAGGTGAGTTAGCGTAAGAA
TCAGTTCTATAAACCCCTGTGCTatagacccggtgggacccggTGGGACC
ACTTTCCCCACTGGAACATTTGCCTAAAAATCTCACCTACaatttcaaag
tcaatttcaaCCCTTCTGCgaaattgactttcatttcatcccTATTTTAA
ATCCAATGTAAAGGTTACCCTAAAAAACCATCTCCCACTAGATATTTTTA
AAATGGGTCGATAGAATTTCTATACTCACTAGgatttcgataaaaaattt
ctaTCCAAGTTCAAGGTTGTATTTCctacttttttgtgatttttgtagAC
TACCTGCAGGAAATCTTGATCGAGAGATGTTGTTTGGGATGTAATTTTAT
CACATACATCCAAAGTGGACAAAATGATGATAAATACTTCCAAAATTATT
ACAGCGGTTTATCTGATCACGCAATCGTTGCACCAGTGGAATTTCGTGGC
GAAGAAGCCAACATTTTAGGACATACAACTGTCCCCGTCTTTCCCCATAC
AAGTGTATATTATCTTGGGTTGATTGAAGATTTGGATGCGTTTGCGTTAG
TTACAAGTTTGGTTTATAATTCTTTGGAAACCTGGCCATTGTTTGTGACT
GCACTTTCGATGGCTGTCAGTGCTGGCGTGGTGATTTGGCTATCTGTAAG
TTTCTCCAATAATATTGAGTAAAAAACTAGATAGTCGATATTTAGAGATT
TTACTTTAGACAGTCTTGTTTTCGCGGAGCCTATGGCAAACCTGCTCATC
TATCTATGATTTCAACAGAATATTTGAAGGTGTGGGAATTGGAAACAGGA
TTTATATCTTTTTCAATGAATTAATAAATTTCAGGTGTGGCAATGTGCGA
GATTTGGTTGTGCTCTTCGATTTAGTTTACAAACCTAAATTAcactcctg
tgtcacagacccgccgAGACCAACCCCACtggaaattttgtttaaaattt
catttccgtCGGGAAAGTACCCTGGAATTTtagaataatagaatttctat
cctcgttgggatttcaatagaattTATCCCCGctttgggaaaaagttcca
ctaGGGCTGTGAGAAAGAGGTATTACATTAGTCAGAAAATTGCTTCTAAC
AGTCACTACTACTCTCTATCTTCACAGGACCAATGGAGTAATGAAGAACA
TTTTCCAAAGACGTTTCCGAGAGGAGCTTAAGGATTTTGGTGGGCTTATG
TTTCCATGACAACAGTTGGGTGAGAGTTAAGAGCTGTATTtcgaaaatag
atttttgaatttgaggataaaatctttattttgagagctctgaaaaaata
tattactgATAAAACATTTTGACGATTCCTTTAAGATTCGTTTTATTATT
TAAATATTCATTATTATTCATTATTTATTCTATAGTCAACagattttgta
ttaaaaaaagtcGTTACATGTGTAGCCAAATTAGAacataaataaaaatt
tctgaACCATTTCAACACTTTCCTCTTTCCCAGATACGGTGACAAGACAC
CATCGACAGTATTTGGCCGTTTGTTTGCTATTCTCTGGATTTTAATCGGC
ATCACCCTATTCAACATGTTCACGGCTGCTATTATCACTGGGTTAAATGC
TGCAATCCGACAACATTCCACTTTTGAATTGAGTGGCTCCAAGGTAACTG
CACTGGTTTCCATTTGATCTGAATACGATTTATGTTTAAAATTGCAAAAC
AATCTCTATAGGAAATAGTTCAGAAGTCGTCTCTAGAAGGCCGCTAGCCT
ACCTTTAACCATAATAGCTTACCCTGCCTTTCAGAGGATAGACCTGGCTT
TAACTTTTTCCAACTTTTTACTAACTTTTTAGGTTGGTTTTATTGAAAGT
AAACCTCACGTCTATAACAGCATCATGAAGGAATTTGCTTTTCCGAAAGG
TAATTATTGAGACATTGCCGTTATTATCTCGAAATGGGTTGAACCCATTT
CGGTTGAGTAAATatacctccttctcacagacccacggggaccccttccc
actggaaaaaattggccaaaataacATCCCCAGTGGAAAACTATATTGTT
TGAAGAACATTTTTGTCCTCGCTGAAAATaaccagataagcaaatcctca
ctgcaaaatattatgctattttccattcccactgaattttctggctcaaa
aacAATACACTTCAAATCCCTAACCGTAAAAAACATGGGGATATCAATCT
CCATCAAGTTTTggtccattatttttacccccagtggttggaaaaatcct
accgggtctgtgagaagggggtgttaaatctaatgaaagttttaaaaatg
aaatccaaaacaCGCAATCCTTTTCTTTTATAGTGTACTTCAACACAACA
CAGTTGATGGAGGCTCTTGATAATGATGAAGTACAAGGTATTTGACATCG
CAAAACCCAGTTTAAGTCCATTCACTTTAAAAGTGTGCACTAATCCTTGC
CATTTCCCAACCTAtgcttcaatatttttttagattttttgagTTATTGT
GCTCTGAAtgatcttttcaacggtatatatAATGTGTTATGTTAGGAATG
AAGTCCCAATGAAGTATTTGCTAAAAAAAAGTTAAGCAAAACAAGGATTA
GTGCACAGTTAACGTGAACGGACcctgctttattggaaaatggcaaaaat
ccTTTTCTGGCGAGaaaaattatcataaatttCATCTCTATTGAATTTTC
GaattattgttttgttgttctGCCCCAGAacaatttttggcaattttttc
agtgTTGTTCTATATCAGAATCTCTCCCCCTCAAAGGCATGCTTATAACa
ccaacaagaaaacaagaatgaagacagagacatcgaatcaagaaaacgaa
atattattaTACATGGAATGGTGGAATTAGAGGTAGATAACAAAGAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa
aaaaaatgatgatttcgtttggcatgtaagaggaagccctagaacaagcc
ttcgcctagttcgaaaacctagaacaaagaccaaaacaacgtcttctctg
tccatatcttctgacgactggacgacagatgaagaattagacaatatttt
ataaatctaaaattatttcgtagaggtcgatagacctgtaaaatataatt
ctatgaataaaaaataataataagatGAGTATACCTCCACACAGTATAAT
ATTTACCTCTTTTATGATTTCAGCCATAGCATTGGATGAGTACGCATATT
TTCATGCTCTGCCGGCTTTCAAAAATCACGGGAAAATTGAAATCAAGCAC
ATTGCAAAACTTTTCGATTATCATGTTGGATTTGGTGTTATGGTGAAAAC
AAATCCTTATTTTCAGATGCaaaaagaatttaatgaattcaGTCAAGAAG
ACTTGGCTTTTTCACAGGTGAGATTCAACTTTTTGTGCTAATATGCTGCC
atatttaataatttttgatcAAAGTCTTTCCTCAGACAAACCctcctaaa
cttttgaaattcaaagtccctctaagggttatttttttcacaaaaacacc
cccttctcacagacccactgggaccccttcttCTAAACTGGGAAAACTTT
TGNCacaaaaacacccccttctcacagacccactgggaccccttcttCTA
AACTGGGAAAACTTTTGTCCCCGCTGTCTGAAATTATCCGTTTATACTCA
AATTCAACCTTTTgattattcaaattttctttttgcagaGATTGGTTCAA
TCACGATCAAGCAANTAGAAGGCCGCTAGCCTACCTTTAACCATAATAGC
TTACCCTGCCTTTCAGAGGATAGACCTGGCTTTAACTTTTTCCAActttt
tactaattttttaGGTTGGTTTTATTGAAAGTAAACCTCACGTCTATAAC
AGCATCATGAAGGAATTTGCTTTTCCGAAAGGTAATTATTGAGACATTGC
CGTTATCTCGAAATGGGTTGAACCCATTTCGGTTGAGTAAATGTACctct
ttctcacagacccactgggaccccttcccacttgaaaaaattggccaaaa
taacatcccagtggaaaattatattgTTTCAGAACATTTTTGTCCTCGCT
GAAAATaaccagataagcaaatcctcgctgcaaaatattatactattttt
tccattcccactgaattttctggctcaaaaacAATACACTTCAAATCCCC
AACCGTAAAAAACATGGGGATATCAATCTCCATCAAGTTTTGGTCCATTA
TTTTTAACCCCAGTGGTtggaaaaatcctaccgggtctgtgagaaggggg
tgttaaatctaatgaaagttttaaaaatcaaatccaAAACACGCAAATTT
TCAATCCTTTTCTTTTATAGTGTACTTCAACACAACACAGTTGATGGAGG
CTCTTGATAATGATGAAGTACAAGGTATTTGACATCACAAGACCCAGTTT
AAGTCCATTCACTTTAAGAGTGTACACTAATGCTTGCCATTTCCCAACCT
ATGcttcaaactttaaaaattcATACCTGtattttcttagattttttgAG
TTATTGTGCTCTGAAtgatcttttcaacggtatatatGATGTCTTATGTA
AGGAATGAAGTATTTGCTAAAAAAAAGTTAAGCAAAACAAGGATTAGTGC
ACAGTTAACGCGAACGGACTTTAGAACcctgctttattggaaaatagcaa
aaatcCTTTTCTGGCGAGAAAAATTATCATAAATCTCATCTCTATTGAAT
TTTCGaattattgttttgttgttctgccccagaaaaatttttgggcaatt
ttttcAGTGTTGTTTTATATCAGAATCTCTCCCCCTCAAAGGCATGCTTA
TAAGATGAGTATACCTCCACACAGTATAATATTTACCTCTTNGTTTTATA
TCAGAATCTCTCCCCCTCAAAGGCATGCTTATAAGATGAGTATACCTCCA
CACAGTATAATATTTACctcttttttatgatttcaGCCATAGCATTGGAT
GAGTACGCATATTTTCATGCTCTGCCGGCTTTCAAAAATCACGGGAAAAT
TGAAATCAAGCACATTGCAAAACTTTTCGATTATCATGTTGGATTTGGTG
TTATGGTGAAAACAAATCCTTATTTTCAGATGCaaaaagaatttaatgaa
ttcaGTCAAGAAGACTTGGCTTTTTCACAGGTGAGATTCAACTTTTTGTG
CTAATATGCTGCCatatttaataatttttgatcAAAGTCTTTCCTCAGAC
AAACCctcctaaacttttgaaattcaaagtccctctaagggttatttttt
ttcacaaaaacacccccttctcacagacacaCTGGGACCCCTTCTTCTAA
ACTGGGAAAACTTTTGTCCCCACTGTCTGAAATTATCCGTTTATACTCAA
ATTCAACCTTTTgattattcaaattttctttttgcagaGATTGGTTCAAT
CACGATCAAGCAAGCAGAGCACAGAAGAAGCTTCAACAATCAGCATTATT
TTCGATGCGCAAAAACAACCTTTCTGGTTGACGATGGTGTCCACGTGTGT
TGGCTCCATGTGTATGGTTTTGCTTTGGTTTTTATTCCGAAAATGTTGTG
AACTAAAAAACAAATCTAAAGTTGAAGCAAGTGAAACCAGGGAAGTTGAA
AAATCACCCGGAATTAAAATTGAAGTCGGAGAGAAGATCCATGtgaggtg
aaagaaaaatatactGGTCGCGGCCTCATAAATGAGCTGGTTGTTACAGA
TCAACACAATTTGGCTTCTTACACAAAATCAAATGCCTCAGAGAGAAACA
ATGGACGGAAACTCAAAAATGAATGGATGGTTGAATCGATCCATGAACCT
TAGAAATCACTTGCTATCAAAGTCGAAGTTTTCGCTTataaaagtccacc
cttacagtgggaaaaattgcaaatttttgcccgaaaattttgatgttttt
gctctaaaagagtttaaaatttgaaaaaatgca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033075XLOC_033075Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052272-exon-scaffold_213-1491911889:848368..848838TCONS_00052272-exon-scaffold_213-1491911889:848368..848838Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1510915933:848368..848838TCONS_00052272-exon-scaffold_213-1510915933:848368..848838Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1575043694:848368..848838TCONS_00052272-exon-scaffold_213-1575043694:848368..848838Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1491911889:849420..849763TCONS_00052272-exon-scaffold_213-1491911889:849420..849763Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1510915933:849420..849763TCONS_00052272-exon-scaffold_213-1510915933:849420..849763Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1575043694:849420..849763TCONS_00052272-exon-scaffold_213-1575043694:849420..849763Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1491911889:850427..850521TCONS_00052272-exon-scaffold_213-1491911889:850427..850521Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1510915933:850427..850521TCONS_00052272-exon-scaffold_213-1510915933:850427..850521Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1575043694:850427..850521TCONS_00052272-exon-scaffold_213-1575043694:850427..850521Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1491911889:858951..859110TCONS_00052272-exon-scaffold_213-1491911889:858951..859110Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1510915933:858951..859110TCONS_00052272-exon-scaffold_213-1510915933:858951..859110Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1575043694:858951..859110TCONS_00052272-exon-scaffold_213-1575043694:858951..859110Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1491911889:859300..859366TCONS_00052272-exon-scaffold_213-1491911889:859300..859366Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1510915933:859300..859366TCONS_00052272-exon-scaffold_213-1510915933:859300..859366Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1575043694:859300..859366TCONS_00052272-exon-scaffold_213-1575043694:859300..859366Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1491911889:859801..859854TCONS_00052272-exon-scaffold_213-1491911889:859801..859854Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1510915933:859801..859854TCONS_00052272-exon-scaffold_213-1510915933:859801..859854Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1575043694:859801..859854TCONS_00052272-exon-scaffold_213-1575043694:859801..859854Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1491911889:863554..863747TCONS_00052272-exon-scaffold_213-1491911889:863554..863747Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1510915933:863554..863747TCONS_00052272-exon-scaffold_213-1510915933:863554..863747Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1575043694:863554..863747TCONS_00052272-exon-scaffold_213-1575043694:863554..863747Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1491911889:864005..864550TCONS_00052272-exon-scaffold_213-1491911889:864005..864550Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1510915933:864005..864550TCONS_00052272-exon-scaffold_213-1510915933:864005..864550Clytia hemisphaericaexon
TCONS_00052272-exon-scaffold_213-1575043694:864005..864550TCONS_00052272-exon-scaffold_213-1575043694:864005..864550Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:848368..864550 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.00548878	0	0	0.0967361	0	0.00868437	0.0372615	0.516617	0.398388	0	0.0185395	0.0049864	0.0721569	0.559935	0.489661	0.271757	0.344327	0.0576878	0.137694	0.274551	0.311641	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052272 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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